pycom08g02830

Mitochondrial calcium uniporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
2155635 .. 2156313
679 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g02830.1

Sequence Viewer

Length: 390 bp
ATGCCTCCGAATGCCGCCCAGGTGAATTACCACAGGGAGTATCTGACCTCGACGGACACCCCTCGGAAAGGATTTTTCCGCCGATTCCTCCACCCCCAGTCGGCATCGAAGCTCCCGGAATTCCTGACCGTTTTGGTTGGGAAGAAGCTCCTGGAAAAACTGAGAGGCATCAACGTTAGCGGTGATCAGCTCTACTCGGCGGTCTCTGCCCTCGACCTCCAGATCGGGCATCAACATTGCATTTTTTCCCTTGGCGTAAAAGACTTTTGGCTTGCGATACTGCATAAGGATTGCTTGGCTGAGGAACTTGAAGATTCAAGACCTTTTTTTGGTTCTCTTTTCCATTTTGTTGGTGTTTGGAATGATTCATTTTTATTATTTTTTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

130

Amino Acids

14.82

Weight (kDa)

7.01

Isoelectric Point (pI)

40.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024653)

Species Orthologous Gene IDs
pyrus_communis pycom07g22960 pycom08g02830 pycom12561g00040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 15, 79, 180, 200
AclI AACGTT 1 cut(s) 174
AcsI RAATTY 1 cut(s) 119
AfiI CCNNNNNNNGG 3 cut(s) 68, 100, 329
AgsI TTSAA 2 cut(s) 311, 318
AjnI CCWGG 2 cut(s) 18, 150
AluBI AGCT 3 cut(s) 112, 148, 190
AluI AGCT 3 cut(s) 112, 148, 190
Alw26I GTCTC 1 cut(s) 208
ApoI RAATTY 1 cut(s) 119
AsuC2I CCSGG 1 cut(s) 116
AsuHPI GGTGA 2 cut(s) 34, 194
BbvCI CCTCAGC 1 cut(s) 300
BciT130I CCWGG 2 cut(s) 20, 152
BclI TGATCA 1 cut(s) 184
BcnI CCSGG 1 cut(s) 116
BcoDI GTCTC 1 cut(s) 208
BisI GCNGC 1 cut(s) 15
BlsI GCNGC 1 cut(s) 16
Bme1390I CCNGG 3 cut(s) 20, 116, 152
BmrFI CCNGG 3 cut(s) 20, 116, 152
BmrI ACTGGG 1 cut(s) 91
BmsI GCATC 3 cut(s) 113, 177, 238
BmuI ACTGGG 1 cut(s) 91
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 300
BpuMI CCSGG 1 cut(s) 116
BsaI GGTCTC 1 cut(s) 208
BsaJI CCNNGG 3 cut(s) 18, 62, 250
Bsc4I CCNNNNNNNGG 3 cut(s) 68, 100, 329
Bse1I ACTGG 1 cut(s) 97
Bse3DI GCAATG 1 cut(s) 235
BseBI CCWGG 2 cut(s) 20, 152
BseDI CCNNGG 3 cut(s) 18, 62, 250
BseLI CCNNNNNNNGG 3 cut(s) 68, 100, 329
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 2 cut(s) 152, 291
BseNI ACTGG 1 cut(s) 97
BsiSI CCGG 1 cut(s) 116
BslI CCNNNNNNNGG 3 cut(s) 68, 100, 329
BsmAI GTCTC 1 cut(s) 208
BsmI GAATGC 1 cut(s) 16
Bso31I GGTCTC 1 cut(s) 208
Bsp143I GATC 2 cut(s) 184, 222
BspACI CCGC 4 cut(s) 15, 79, 180, 200
BspCNI CTCAG 2 cut(s) 153, 292
BspTNI GGTCTC 1 cut(s) 208
BsrDI GCAATG 1 cut(s) 235
BsrI ACTGG 1 cut(s) 97
BssECI CCNNGG 3 cut(s) 18, 62, 250
BssMI GATC 2 cut(s) 184, 222
BssT1I CCWWGG 1 cut(s) 250
Bst2UI CCWGG 2 cut(s) 20, 152
Bst4CI ACNGT 1 cut(s) 130
BstC8I GCNNGC 1 cut(s) 273
BstDEI CTNAG 2 cut(s) 161, 300
BstENI CCTNNNNNAGG 1 cut(s) 66
BstKTI GATC 2 cut(s) 187, 225
BstMAI GTCTC 1 cut(s) 208
BstMBI GATC 2 cut(s) 184, 222
BstMWI GCNNNNNNNGC 1 cut(s) 206
BstNI CCWGG 2 cut(s) 20, 152
BstSCI CCNGG 3 cut(s) 18, 114, 150
BstXI CCANNNNNNTGG 1 cut(s) 350
Cac8I GCNNGC 1 cut(s) 273
CviJI RGCY 5 cut(s) 112, 148, 190, 271, 299
CviKI_1 RGCY 5 cut(s) 112, 148, 190, 271, 299
DdeI CTNAG 2 cut(s) 161, 300
DpnI GATC 2 cut(s) 186, 224
DpnII GATC 2 cut(s) 184, 222
EciI GGCGGA 1 cut(s) 68
Eco130I CCWWGG 1 cut(s) 250
Eco31I GGTCTC 1 cut(s) 208
EcoNI CCTNNNNNAGG 1 cut(s) 66
EcoRI GAATTC 1 cut(s) 119
EcoRII CCWGG 2 cut(s) 18, 150
EcoT14I CCWWGG 1 cut(s) 250
ErhI CCWWGG 1 cut(s) 250
FaiI YATR 1 cut(s) 285
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FbaI TGATCA 1 cut(s) 184
Fnu4HI GCNGC 1 cut(s) 15
Fsp4HI GCNGC 1 cut(s) 15
GluI GCNGC 1 cut(s) 15
GsuI CTGGAG 1 cut(s) 203
HapII CCGG 1 cut(s) 116
HinfI GANTC 3 cut(s) 84, 314, 365
HpaII CCGG 1 cut(s) 116
HphI GGTGA 2 cut(s) 34, 194
Hpy188I TCNGA 3 cut(s) 9, 45, 66
Hpy188III TCNNGA 3 cut(s) 124, 220, 318
Hpy99I CGWCG 1 cut(s) 55
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 2 cut(s) 240, 283
HpyF10VI GCNNNNNNNGC 1 cut(s) 206
HpyF3I CTNAG 2 cut(s) 161, 300
HpySE526I ACGT 1 cut(s) 174
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 2 cut(s) 184, 222
LmnI GCTCC 2 cut(s) 117, 153
LpnPI CCDG 9 cut(s) 5, 19, 32, 110, 129, 137, 137, 164, 233
LweI GCATC 3 cut(s) 113, 177, 238
MaeII ACGT 1 cut(s) 174
MalI GATC 2 cut(s) 186, 224
MboI GATC 2 cut(s) 184, 222
MboII GAAGA 2 cut(s) 154, 323
MluCI AATT 2 cut(s) 25, 119
MnlI CCTC 8 cut(s) 15, 58, 72, 98, 158, 221, 227, 295
MspI CCGG 1 cut(s) 116
MspR9I CCNGG 3 cut(s) 20, 116, 152
Mva1269I GAATGC 1 cut(s) 16
MvaI CCWGG 2 cut(s) 20, 152
MwoI GCNNNNNNNGC 1 cut(s) 206
NciI CCSGG 1 cut(s) 116
NdeII GATC 2 cut(s) 184, 222
NmeAIII GCCGAG 1 cut(s) 176
PctI GAATGC 1 cut(s) 16
PfeI GAWTC 3 cut(s) 84, 314, 365
PfoI TCCNGGA 2 cut(s) 114, 150
PkrI GCNGC 1 cut(s) 16
Psp1406I AACGTT 1 cut(s) 174
Psp6I CCWGG 2 cut(s) 18, 150
PspGI CCWGG 2 cut(s) 18, 150
SatI GCNGC 1 cut(s) 15
Sau3AI GATC 2 cut(s) 184, 222
ScrFI CCNGG 3 cut(s) 20, 116, 152
SetI ASST 8 cut(s) 24, 50, 114, 150, 177, 192, 219, 325
SfaNI GCATC 3 cut(s) 113, 177, 238
Sse9I AATT 2 cut(s) 25, 119
SsiI CCGC 4 cut(s) 15, 79, 180, 200
StyD4I CCNGG 3 cut(s) 18, 114, 150
StyI CCWWGG 1 cut(s) 250
TaaI ACNGT 1 cut(s) 130
TaiI ACGT 1 cut(s) 177
TaqI TCGA 3 cut(s) 50, 107, 213
TasI AATT 2 cut(s) 25, 119
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 3 cut(s) 84, 314, 365
TspDTI ATGAA 1 cut(s) 357
TspGWI ACGGA 1 cut(s) 68
XagI CCTNNNNNAGG 1 cut(s) 66
XapI RAATTY 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.