pycom08g07200

3-oxo-Delta(4,5)-steroid 5-beta-reductase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
5786712 .. 5786942
231 bp
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UTR
Exon/CDS
Intron
pycom08g07200.1

Sequence Viewer

Length: 231 bp
ATGAAGGGGAAGGAGGGGGTGTGGGAGGAGATAGTGAGGGAGAACGAGCTGCAGGCGACGAGGTTGGAGGAGGTGGGGGTGTGGTGGTTTGTGGATGCTATGCTGGGTGGGGAGAGTATGATTTGTAGCATGAACAAGAGCAAGGAGCATGGGTTCGTCGGGTTTCGAAACTCGAGGAATTCGTTTGTTACTTGGATTGACAAGATGAAATCTTTCAAGATTGTGCCTTGA

Protein Analysis

77

Amino Acids

8.84

Weight (kDa)

6.57

Isoelectric Point (pI)

25.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029343)

Species Orthologous Gene IDs
pyrus_communis pycom08g07200 pycom15g06860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 178
AgsI TTSAA 1 cut(s) 217
AloI GAACNNNNNNTCC 2 cut(s) 137, 169
AluBI AGCT 1 cut(s) 49
AluI AGCT 1 cut(s) 49
Ama87I CYCGRG 1 cut(s) 172
ApeKI GCWGC 1 cut(s) 49
ApoI RAATTY 1 cut(s) 178
Asp700I GAANNNNTTC 1 cut(s) 212
AsuII TTCGAA 1 cut(s) 166
AvaI CYCGRG 1 cut(s) 172
BbvI GCAGC 1 cut(s) 36
BfmI CTRYAG 1 cut(s) 50
BisI GCNGC 1 cut(s) 50
BlsI GCNGC 1 cut(s) 51
BmeT110I CYCGRG 1 cut(s) 172
BmsI GCATC 1 cut(s) 85
Bpu14I TTCGAA 1 cut(s) 166
BsaXI ACNNNNNCTCC 4 cut(s) 5, 35, 137, 167
BseGI GGATG 1 cut(s) 100
BseRI GAGGAG 2 cut(s) 41, 83
BseXI GCAGC 1 cut(s) 36
BseYI CCCAGC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 172
BsoBI CYCGRG 1 cut(s) 172
Bsp119I TTCGAA 1 cut(s) 166
BspMAI CTGCAG 1 cut(s) 54
BspT104I TTCGAA 1 cut(s) 166
BstBI TTCGAA 1 cut(s) 166
BstC8I GCNNGC 1 cut(s) 54
BstF5I GGATG 1 cut(s) 100
BstSFI CTRYAG 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 36
BtsCI GGATG 1 cut(s) 100
Cac8I GCNNGC 1 cut(s) 54
CviAII CATG 2 cut(s) 130, 149
CviJI RGCY 1 cut(s) 49
CviKI_1 RGCY 1 cut(s) 49
Eco88I CYCGRG 1 cut(s) 172
EcoRI GAATTC 1 cut(s) 178
FaeI CATG 2 cut(s) 133, 152
FaiI YATR 4 cut(s) 101, 119, 131, 150
FatI CATG 2 cut(s) 129, 148
Fnu4HI GCNGC 1 cut(s) 50
FokI GGATG 1 cut(s) 107
Fsp4HI GCNGC 1 cut(s) 50
GluI GCNGC 1 cut(s) 50
GsaI CCCAGC 1 cut(s) 107
Hin1II CATG 2 cut(s) 133, 152
Hpy188III TCNNGA 1 cut(s) 217
Hpy99I CGWCG 2 cut(s) 61, 161
HpyAV CCTTC 1 cut(s) 4
HpyCH4V TGCA 1 cut(s) 52
Hsp92II CATG 2 cut(s) 133, 152
LmnI GCTCC 1 cut(s) 145
LpnPI CCDG 2 cut(s) 38, 89
Lsp1109I GCAGC 1 cut(s) 36
LweI GCATC 1 cut(s) 85
MaeIII GTNAC 1 cut(s) 187
MluCI AATT 1 cut(s) 178
MmeI TCCRAC 1 cut(s) 45
MnlI CCTC 7 cut(s) 7, 19, 30, 54, 61, 64, 168
MroXI GAANNNNTTC 1 cut(s) 212
NlaIII CATG 2 cut(s) 133, 152
NspV TTCGAA 1 cut(s) 166
PaeR7I CTCGAG 1 cut(s) 172
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PdmI GAANNNNTTC 1 cut(s) 212
PkrI GCNGC 1 cut(s) 51
PspFI CCCAGC 1 cut(s) 103
PspXI VCTCGAGB 1 cut(s) 172
PstI CTGCAG 1 cut(s) 54
SatI GCNGC 1 cut(s) 50
SetI ASST 3 cut(s) 51, 65, 75
SfaNI GCATC 1 cut(s) 85
SfcI CTRYAG 1 cut(s) 50
Sfr274I CTCGAG 1 cut(s) 172
SfuI TTCGAA 1 cut(s) 166
SlaI CTCGAG 1 cut(s) 172
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
Sse9I AATT 1 cut(s) 178
TaqI TCGA 2 cut(s) 166, 173
TasI AATT 1 cut(s) 178
TseI GCWGC 1 cut(s) 49
TspDTI ATGAA 3 cut(s) 17, 146, 221
XapI RAATTY 1 cut(s) 178
XhoI CTCGAG 1 cut(s) 172
XmnI GAANNNNTTC 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.