pycom15g06860

3-oxo-Delta(4,5)-steroid 5-beta-reductase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
4200286 .. 4200516
231 bp
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UTR
Exon/CDS
Intron
pycom15g06860.1

Sequence Viewer

Length: 231 bp
ATGAAGGGGAAGGAGGGGGTATGGGAGGAGATAGTGAGGGAAAATGAGCTGAAGGAGACGAAGCTGGAGGAGGTGGGAGTGTGGTGGTTTGTGGATGTAGTGCTGGGTGGGGAGGGTGTGCTTTCTAGCATGAACAAGAGCAAGGAGCATGGGTTTGTGGGGTTTAGAAACTCGAGGAATTCGTTTGTTACCTGGATTGATAAGATGAAATCTTTCAAGATTGTGCCTTGA

Protein Analysis

77

Amino Acids

8.79

Weight (kDa)

6.58

Isoelectric Point (pI)

19.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029343)

Species Orthologous Gene IDs
pyrus_communis pycom08g07200 pycom15g06860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 178
AcuI CTGAAG 1 cut(s) 71
AgsI TTSAA 1 cut(s) 217
AjnI CCWGG 1 cut(s) 191
AluBI AGCT 2 cut(s) 49, 64
AluI AGCT 2 cut(s) 49, 64
Alw26I GTCTC 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 172
ApoI RAATTY 1 cut(s) 178
Asp700I GAANNNNTTC 1 cut(s) 212
AvaI CYCGRG 1 cut(s) 172
BciT130I CCWGG 1 cut(s) 193
BcoDI GTCTC 1 cut(s) 50
BfaI CTAG 1 cut(s) 126
Bme1390I CCNGG 1 cut(s) 193
BmeT110I CYCGRG 1 cut(s) 172
BmrFI CCNGG 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 86
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
BseBI CCWGG 1 cut(s) 193
BseGI GGATG 1 cut(s) 100
BseRI GAGGAG 2 cut(s) 41, 83
BseYI CCCAGC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 172
BsmAI GTCTC 1 cut(s) 50
BsmBI CGTCTC 1 cut(s) 50
BsoBI CYCGRG 1 cut(s) 172
Bst2UI CCWGG 1 cut(s) 193
BstF5I GGATG 1 cut(s) 100
BstMAI GTCTC 1 cut(s) 50
BstNI CCWGG 1 cut(s) 193
BstSCI CCNGG 1 cut(s) 191
BtsCI GGATG 1 cut(s) 100
CviAII CATG 2 cut(s) 130, 149
CviJI RGCY 2 cut(s) 49, 64
CviKI_1 RGCY 2 cut(s) 49, 64
Eco57I CTGAAG 1 cut(s) 71
Eco88I CYCGRG 1 cut(s) 172
EcoRI GAATTC 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 191
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 2 cut(s) 133, 152
FaiI YATR 3 cut(s) 22, 131, 150
FatI CATG 2 cut(s) 129, 148
FokI GGATG 1 cut(s) 107
FspBI CTAG 1 cut(s) 126
GsaI CCCAGC 1 cut(s) 107
GsuI CTGGAG 1 cut(s) 86
Hin1II CATG 2 cut(s) 133, 152
Hpy188III TCNNGA 1 cut(s) 217
HpyAV CCTTC 2 cut(s) 4, 46
Hsp92II CATG 2 cut(s) 133, 152
LmnI GCTCC 1 cut(s) 145
LpnPI CCDG 4 cut(s) 50, 89, 178, 205
MaeI CTAG 1 cut(s) 126
MaeIII GTNAC 1 cut(s) 187
MluCI AATT 1 cut(s) 178
MnlI CCTC 7 cut(s) 7, 19, 30, 61, 64, 106, 168
MroXI GAANNNNTTC 1 cut(s) 212
MspR9I CCNGG 1 cut(s) 193
MvaI CCWGG 1 cut(s) 193
NlaIII CATG 2 cut(s) 133, 152
PaeR7I CTCGAG 1 cut(s) 172
PcsI WCGNNNNNNNCGW 1 cut(s) 179
PdmI GAANNNNTTC 1 cut(s) 212
Psp6I CCWGG 1 cut(s) 191
PspFI CCCAGC 1 cut(s) 103
PspGI CCWGG 1 cut(s) 191
PspXI VCTCGAGB 1 cut(s) 172
ScrFI CCNGG 1 cut(s) 193
SetI ASST 4 cut(s) 51, 66, 75, 194
Sfr274I CTCGAG 1 cut(s) 172
SlaI CTCGAG 1 cut(s) 172
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
Sse9I AATT 1 cut(s) 178
SspMI CTAG 1 cut(s) 126
StyD4I CCNGG 1 cut(s) 191
TaqI TCGA 1 cut(s) 173
TasI AATT 1 cut(s) 178
TspDTI ATGAA 3 cut(s) 17, 146, 221
XapI RAATTY 1 cut(s) 178
XhoI CTCGAG 1 cut(s) 172
XmnI GAANNNNTTC 1 cut(s) 212
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.