Sister chromatid cohesion protein PDS5 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom08g14130 |
| rosa_multiflora | Rmu_sc0018345.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 16 |
| AccBSI | CCGCTC | 1 cut(s) | 109 |
| AciI | CCGC | 1 cut(s) | 107 |
| AgsI | TTSAA | 1 cut(s) | 211 |
| AluBI | AGCT | 2 cut(s) | 88, 92 |
| AluI | AGCT | 2 cut(s) | 88, 92 |
| Alw26I | GTCTC | 1 cut(s) | 131 |
| Ama87I | CYCGRG | 1 cut(s) | 115 |
| AsuNHI | GCTAGC | 1 cut(s) | 88 |
| AvaI | CYCGRG | 1 cut(s) | 115 |
| BanI | GGYRCC | 1 cut(s) | 16 |
| BclI | TGATCA | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 131 |
| BfaI | CTAG | 2 cut(s) | 89, 194 |
| BglII | AGATCT | 1 cut(s) | 196 |
| BmeT110I | CYCGRG | 1 cut(s) | 115 |
| BmiI | GGNNCC | 1 cut(s) | 18 |
| BmtI | GCTAGC | 1 cut(s) | 92 |
| BsaBI | GATNNNNATC | 1 cut(s) | 195 |
| Bse3DI | GCAATG | 1 cut(s) | 193 |
| Bse8I | GATNNNNATC | 1 cut(s) | 195 |
| BseJI | GATNNNNATC | 1 cut(s) | 195 |
| BseMI | GCAATG | 1 cut(s) | 193 |
| BseRI | GAGGAG | 1 cut(s) | 133 |
| BshNI | GGYRCC | 1 cut(s) | 16 |
| BsiHKCI | CYCGRG | 1 cut(s) | 115 |
| BsmAI | GTCTC | 1 cut(s) | 131 |
| BsoBI | CYCGRG | 1 cut(s) | 115 |
| Bsp143I | GATC | 3 cut(s) | 165, 190, 196 |
| BspACI | CCGC | 1 cut(s) | 107 |
| BspLI | GGNNCC | 1 cut(s) | 18 |
| BspOI | GCTAGC | 1 cut(s) | 92 |
| BspQI | GCTCTTC | 1 cut(s) | 116 |
| BspT107I | GGYRCC | 1 cut(s) | 16 |
| BsrBI | CCGCTC | 1 cut(s) | 109 |
| BsrDI | GCAATG | 1 cut(s) | 193 |
| BssMI | GATC | 3 cut(s) | 165, 190, 196 |
| Bst4CI | ACNGT | 1 cut(s) | 142 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 107 |
| BstDEI | CTNAG | 1 cut(s) | 47 |
| BstKTI | GATC | 3 cut(s) | 168, 193, 199 |
| BstMAI | GTCTC | 1 cut(s) | 131 |
| BstMBI | GATC | 3 cut(s) | 165, 190, 196 |
| BstNSI | RCATGY | 1 cut(s) | 79 |
| BstX2I | RGATCY | 1 cut(s) | 196 |
| BstYI | RGATCY | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 107 |
| CviAII | CATG | 3 cut(s) | 76, 97, 169 |
| CviJI | RGCY | 5 cut(s) | 11, 88, 92, 105, 125 |
| CviKI_1 | RGCY | 5 cut(s) | 11, 88, 92, 105, 125 |
| DdeI | CTNAG | 1 cut(s) | 47 |
| DpnI | GATC | 3 cut(s) | 167, 192, 198 |
| DpnII | GATC | 3 cut(s) | 165, 190, 196 |
| DraI | TTTAAA | 1 cut(s) | 60 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| Eco88I | CYCGRG | 1 cut(s) | 115 |
| FaeI | CATG | 3 cut(s) | 79, 100, 172 |
| FaiI | YATR | 5 cut(s) | 14, 77, 98, 170, 215 |
| FatI | CATG | 3 cut(s) | 75, 96, 168 |
| FauI | CCCGC | 1 cut(s) | 114 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| FspBI | CTAG | 2 cut(s) | 89, 194 |
| Hin1II | CATG | 3 cut(s) | 79, 100, 172 |
| Hpy188III | TCNNGA | 4 cut(s) | 82, 115, 194, 200 |
| HpyCH4III | ACNGT | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 2 cut(s) | 146, 186 |
| HpyF3I | CTNAG | 1 cut(s) | 47 |
| Hsp92II | CATG | 3 cut(s) | 79, 100, 172 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 3 cut(s) | 165, 190, 196 |
| LguI | GCTCTTC | 1 cut(s) | 116 |
| MaeI | CTAG | 2 cut(s) | 89, 194 |
| MalI | GATC | 3 cut(s) | 167, 192, 198 |
| MbiI | CCGCTC | 1 cut(s) | 109 |
| MboI | GATC | 3 cut(s) | 165, 190, 196 |
| MboII | GAAGA | 2 cut(s) | 103, 211 |
| MflI | RGATCY | 1 cut(s) | 196 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| MnlI | CCTC | 4 cut(s) | 36, 111, 114, 225 |
| MseI | TTAA | 2 cut(s) | 59, 180 |
| MslI | CAYNNNNRTG | 1 cut(s) | 80 |
| NdeII | GATC | 3 cut(s) | 165, 190, 196 |
| NheI | GCTAGC | 1 cut(s) | 88 |
| NlaIII | CATG | 3 cut(s) | 79, 100, 172 |
| NlaIV | GGNNCC | 1 cut(s) | 18 |
| NspI | RCATGY | 1 cut(s) | 79 |
| PaeR7I | CTCGAG | 1 cut(s) | 115 |
| PciSI | GCTCTTC | 1 cut(s) | 116 |
| PspN4I | GGNNCC | 1 cut(s) | 18 |
| PsuI | RGATCY | 1 cut(s) | 196 |
| RseI | CAYNNNNRTG | 1 cut(s) | 80 |
| SapI | GCTCTTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 2 cut(s) | 59, 180 |
| Sau3AI | GATC | 3 cut(s) | 165, 190, 196 |
| SetI | ASST | 4 cut(s) | 28, 90, 94, 236 |
| Sfr274I | CTCGAG | 1 cut(s) | 115 |
| SlaI | CTCGAG | 1 cut(s) | 115 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 80 |
| SmlI | CTYRAG | 1 cut(s) | 115 |
| SmoI | CTYRAG | 1 cut(s) | 115 |
| SsiI | CCGC | 1 cut(s) | 107 |
| SspMI | CTAG | 2 cut(s) | 89, 194 |
| TaaI | ACNGT | 1 cut(s) | 142 |
| TaqI | TCGA | 2 cut(s) | 116, 201 |
| Tru1I | TTAA | 2 cut(s) | 59, 180 |
| Tru9I | TTAA | 2 cut(s) | 59, 180 |
| XbaI | TCTAGA | 1 cut(s) | 193 |
| XceI | RCATGY | 1 cut(s) | 79 |
| XhoI | CTCGAG | 1 cut(s) | 115 |
| XspI | CTAG | 2 cut(s) | 89, 194 |