pycom08g14430

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0029350
Physical Location & Seq
Forward (+)
13678672 .. 13681247
2576 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g14430.5

Sequence Viewer

Length: 687 bp
ATGAATTTGAGTAATCGTAGTTGGACAAAGTCCTTCACTAAGAGTTCTTCGCGAGGACCCCCAATTTTCATGGTACTACTAAGCCCAGAGAAAGAGAAATTTGTCGCTCGTCTGCAAGAGAAGACGTCATACTCCTTTGCACTCGTCATCCTCGCCGTCATCTGCGTCCTGCTCGCCGTCCTCTGCTCCTCATCAGCATATTCAAATCCTTGCAATTGGACCGGAGTTCGTTGTTCTGATTTCAAGAGGTTTCATGGAGAAATGTTGACCACTTTCTGCAAAATGACCAACCGTAGAAAGCTTTACCTCTGTGAGAATTATGTGTTTGGTGAAATGCCTGAGGAGATAGGGAATTTAGCTTCACCTGAAGAGCTTTTCATTTACAGTAATAATCTTACCGGTGTCATTCCCACGTCGATTAGTAAGTTGATTTGTGTTGATTTGACTGTGAAGTTTGAAAGAAATTTATACACAGAAGGCAAGTCCATTGAAATGCTCGATACATCAGTAGGAGACTCCAGTAATCCACATGAAGTTTTGCGGTCAATCCATGTGGGTTTTTTATGTGTGCAGCGAAATCCGGCAGATAGGCCAAGCATGCCAACTGCGGTTCTGATATTGAGTGGTGTGGATTGCCTGAACCTGAAAAACCTGATTTTTACAGTGAAAGAGATCGATCTCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

229

Amino Acids

25.6

Weight (kDa)

8.05

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029350)

Species Orthologous Gene IDs
pyrus_communis pycom08g12120 pycom08g14430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 128
AccII CGCG 1 cut(s) 52
AciI CCGC 2 cut(s) 541, 608
AcsI RAATTY 4 cut(s) 4, 98, 352, 463
AcuI CTGAAG 1 cut(s) 387
AcyI GRCGYC 1 cut(s) 125
AfaI GTAC 1 cut(s) 75
AgeI ACCGGT 1 cut(s) 398
AgsI TTSAA 4 cut(s) 204, 244, 458, 491
AjiI CACGTC 1 cut(s) 414
AluBI AGCT 3 cut(s) 301, 359, 373
AluI AGCT 3 cut(s) 301, 359, 373
Alw26I GTCTC 1 cut(s) 507
AoxI GGCC 1 cut(s) 590
ApeKI GCWGC 1 cut(s) 571
ApoI RAATTY 4 cut(s) 4, 98, 352, 463
AsiGI ACCGGT 1 cut(s) 398
AspS9I GGNCC 2 cut(s) 56, 219
AsuHPI GGTGA 2 cut(s) 341, 354
AvaII GGWCC 2 cut(s) 56, 219
AxyI CCTNAGG 1 cut(s) 339
BaeI ACNNNNGTAYC 2 cut(s) 492, 525
BarI GAAGNNNNNNTAC 2 cut(s) 113, 145
BbsI GAAGAC 1 cut(s) 128
BbvI GCAGC 1 cut(s) 583
BceAI ACGGC 2 cut(s) 140, 161
BcoDI GTCTC 1 cut(s) 507
BisI GCNGC 1 cut(s) 572
BlsI GCNGC 1 cut(s) 573
Bme18I GGWCC 2 cut(s) 56, 219
BmgBI CACGTC 1 cut(s) 414
BmgT120I GGNCC 2 cut(s) 56, 219
BmiI GGNNCC 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 128
BpmI CTGGAG 1 cut(s) 502
Bsa29I ATCGAT 1 cut(s) 675
BsaHI GRCGYC 1 cut(s) 125
BsaWI WCCGGW 2 cut(s) 221, 398
Bse118I RCCGGY 1 cut(s) 398
Bse1I ACTGG 1 cut(s) 519
Bse21I CCTNAGG 1 cut(s) 339
BseCI ATCGAT 1 cut(s) 675
BseGI GGATG 1 cut(s) 147
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 1 cut(s) 519
BseRI GAGGAG 2 cut(s) 178, 356
BseXI GCAGC 1 cut(s) 583
BsgI GTGCAG 1 cut(s) 590
Bsh1236I CGCG 1 cut(s) 52
BshFI GGCC 1 cut(s) 592
BshTI ACCGGT 1 cut(s) 398
BshVI ATCGAT 1 cut(s) 675
BsiSI CCGG 3 cut(s) 222, 399, 581
BsmAI GTCTC 1 cut(s) 507
BsnI GGCC 1 cut(s) 592
Bsp143I GATC 2 cut(s) 672, 676
Bsp68I TCGCGA 1 cut(s) 52
BspACI CCGC 2 cut(s) 541, 608
BspANI GGCC 1 cut(s) 592
BspCNI CTCAG 1 cut(s) 331
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 1 cut(s) 52
BspLI GGNNCC 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 363
BsrFI RCCGGY 1 cut(s) 398
BsrI ACTGG 1 cut(s) 519
BssAI RCCGGY 1 cut(s) 398
BssMI GATC 2 cut(s) 672, 676
BssNI GRCGYC 1 cut(s) 125
Bst4CI ACNGT 4 cut(s) 293, 386, 448, 664
Bst6I CTCTTC 1 cut(s) 363
BstACI GRCGYC 1 cut(s) 125
BstC8I GCNNGC 2 cut(s) 174, 599
BstDEI CTNAG 3 cut(s) 39, 80, 339
BstF5I GGATG 1 cut(s) 147
BstFNI CGCG 1 cut(s) 52
BstKTI GATC 2 cut(s) 675, 679
BstMAI GTCTC 1 cut(s) 507
BstMBI GATC 2 cut(s) 672, 676
BstMWI GCNNNNNNNGC 1 cut(s) 598
BstNSI RCATGY 1 cut(s) 601
BstUI CGCG 1 cut(s) 52
BstV1I GCAGC 1 cut(s) 583
BstV2I GAAGAC 1 cut(s) 128
Bsu15I ATCGAT 1 cut(s) 675
Bsu36I CCTNAGG 1 cut(s) 339
BsuRI GGCC 1 cut(s) 592
BsuTUI ATCGAT 1 cut(s) 675
BtrI CACGTC 1 cut(s) 414
BtsCI GGATG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 669
BtuMI TCGCGA 1 cut(s) 52
Cac8I GCNNGC 2 cut(s) 174, 599
Cfr10I RCCGGY 1 cut(s) 398
Cfr13I GGNCC 2 cut(s) 56, 219
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 1 cut(s) 154
Csp6I GTAC 1 cut(s) 74
CspAI ACCGGT 1 cut(s) 398
CspCI CAANNNNNGTGG 2 cut(s) 534, 569
CviAII CATG 5 cut(s) 70, 254, 530, 551, 598
CviJI RGCY 5 cut(s) 84, 301, 359, 373, 592
CviKI_1 RGCY 5 cut(s) 84, 301, 359, 373, 592
CviQI GTAC 1 cut(s) 74
DdeI CTNAG 3 cut(s) 39, 80, 339
DpnI GATC 2 cut(s) 674, 678
DpnII GATC 2 cut(s) 672, 676
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Eco47I GGWCC 2 cut(s) 56, 219
Eco57I CTGAAG 1 cut(s) 387
Eco81I CCTNAGG 1 cut(s) 339
EcoO109I RGGNCCY 1 cut(s) 56
FaeI CATG 5 cut(s) 73, 257, 533, 554, 601
FatI CATG 5 cut(s) 69, 253, 529, 550, 597
Fnu4HI GCNGC 1 cut(s) 572
FokI GGATG 1 cut(s) 134
Fsp4HI GCNGC 1 cut(s) 572
GluI GCNGC 1 cut(s) 572
GsuI CTGGAG 1 cut(s) 502
HaeIII GGCC 1 cut(s) 592
HapII CCGG 3 cut(s) 222, 399, 581
HgaI GACGC 1 cut(s) 154
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 5 cut(s) 73, 257, 533, 554, 601
HincII GTYRAC 1 cut(s) 267
HindII GTYRAC 1 cut(s) 267
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 1 cut(s) 515
HpaII CCGG 3 cut(s) 222, 399, 581
HphI GGTGA 2 cut(s) 341, 354
Hpy166II GTNNAC 1 cut(s) 267
Hpy188I TCNGA 2 cut(s) 238, 615
Hpy188III TCNNGA 2 cut(s) 51, 244
Hpy8I GTNNAC 1 cut(s) 267
Hpy99I CGWCG 1 cut(s) 418
HpyAV CCTTC 2 cut(s) 43, 470
HpyCH4III ACNGT 4 cut(s) 293, 386, 448, 664
HpyCH4IV ACGT 2 cut(s) 125, 413
HpyCH4V TGCA 5 cut(s) 115, 140, 213, 279, 571
HpyF10VI GCNNNNNNNGC 1 cut(s) 598
HpyF3I CTNAG 3 cut(s) 39, 80, 339
HpySE526I ACGT 2 cut(s) 125, 413
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 5 cut(s) 73, 257, 533, 554, 601
Kzo9I GATC 2 cut(s) 672, 676
LguI GCTCTTC 1 cut(s) 363
LmnI GCTCC 1 cut(s) 191
Lsp1109I GCAGC 1 cut(s) 583
MaeII ACGT 2 cut(s) 125, 413
MalI GATC 2 cut(s) 674, 678
MboI GATC 2 cut(s) 672, 676
MboII GAAGA 3 cut(s) 39, 133, 380
MfeI CAATTG 1 cut(s) 214
MluCI AATT 7 cut(s) 4, 63, 98, 214, 316, 352, 463
MlyI GAGTC 1 cut(s) 509
MnlI CCTC 7 cut(s) 47, 161, 191, 199, 240, 317, 334
MslI CAYNNNNRTG 1 cut(s) 491
MspI CCGG 3 cut(s) 222, 399, 581
MunI CAATTG 1 cut(s) 214
MvnI CGCG 1 cut(s) 52
MwoI GCNNNNNNNGC 1 cut(s) 598
NdeII GATC 2 cut(s) 672, 676
NlaIII CATG 5 cut(s) 73, 257, 533, 554, 601
NlaIV GGNNCC 1 cut(s) 58
NruI TCGCGA 1 cut(s) 52
NspI RCATGY 1 cut(s) 601
PaeI GCATGC 1 cut(s) 601
PciSI GCTCTTC 1 cut(s) 363
PflFI GACNNNGTC 1 cut(s) 28
PinAI ACCGGT 1 cut(s) 398
PkrI GCNGC 1 cut(s) 573
PleI GAGTC 1 cut(s) 509
PpsI GAGTC 1 cut(s) 509
PpuMI RGGWCCY 1 cut(s) 56
Psp5II RGGWCCY 1 cut(s) 56
PspN4I GGNNCC 1 cut(s) 58
PspPI GGNCC 2 cut(s) 56, 219
PspPPI RGGWCCY 1 cut(s) 56
PsyI GACNNNGTC 1 cut(s) 28
RruI TCGCGA 1 cut(s) 52
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
RseI CAYNNNNRTG 1 cut(s) 491
SapI GCTCTTC 1 cut(s) 363
SatI GCNGC 1 cut(s) 572
Sau3AI GATC 2 cut(s) 672, 676
Sau96I GGNCC 2 cut(s) 56, 219
SchI GAGTC 1 cut(s) 509
SinI GGWCC 2 cut(s) 56, 219
SmiMI CAYNNNNRTG 1 cut(s) 491
SphI GCATGC 1 cut(s) 601
Sse9I AATT 7 cut(s) 4, 63, 98, 214, 316, 352, 463
SsiI CCGC 2 cut(s) 541, 608
TaaI ACNGT 4 cut(s) 293, 386, 448, 664
TaiI ACGT 2 cut(s) 128, 416
TaqI TCGA 3 cut(s) 416, 498, 675
TasI AATT 7 cut(s) 4, 63, 98, 214, 316, 352, 463
TscAI CASTG 1 cut(s) 669
TseI GCWGC 1 cut(s) 571
TspDTI ATGAA 5 cut(s) 17, 58, 242, 367, 546
TspRI CASTG 1 cut(s) 669
Tth111I GACNNNGTC 1 cut(s) 28
VpaK11BI GGWCC 2 cut(s) 56, 219
XapI RAATTY 4 cut(s) 4, 98, 352, 463
XceI RCATGY 1 cut(s) 601
ZraI GACGTC 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.