transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45380 |
| malus_domestica | MD17G1073900.v1.1 |
| pyrus_communis | pycom09g01010 pycom17g07470 |
| rosa_chinensis | RchiOBHm_Chr2g0163191 |
| rosa_laevigata | RLG00000021380 |
| rosa_multiflora | Rmu_sc0002045.1_g000038 Rmu_sc0008246.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00087480 |
| rosa_rugosa | Rorug02G0501100 |
| rosa_samantha | Rh2AG567600 Rh2BG579700 Rh2CG549600 Rh2DG590000 |
| rosa_wichuraiana | Rw2G046990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 48 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 32 |
| AgsI | TTSAA | 1 cut(s) | 97 |
| AjnI | CCWGG | 2 cut(s) | 72, 118 |
| AluBI | AGCT | 2 cut(s) | 115, 296 |
| AluI | AGCT | 2 cut(s) | 115, 296 |
| Alw26I | GTCTC | 3 cut(s) | 70, 192, 241 |
| AoxI | GGCC | 2 cut(s) | 23, 75 |
| AspLEI | GCGC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 1 cut(s) | 23 |
| AsuC2I | CCSGG | 1 cut(s) | 22 |
| BaeGI | GKGCMC | 1 cut(s) | 285 |
| BciT130I | CCWGG | 2 cut(s) | 74, 120 |
| BcnI | CCSGG | 1 cut(s) | 22 |
| BcoDI | GTCTC | 3 cut(s) | 70, 192, 241 |
| BfoI | RGCGCY | 1 cut(s) | 139 |
| Bme1390I | CCNGG | 3 cut(s) | 22, 74, 120 |
| BmgT120I | GGNCC | 1 cut(s) | 23 |
| BmiI | GGNNCC | 1 cut(s) | 19 |
| BmrFI | CCNGG | 3 cut(s) | 22, 74, 120 |
| BpmI | CTGGAG | 2 cut(s) | 36, 56 |
| BpuMI | CCSGG | 1 cut(s) | 22 |
| BsaJI | CCNNGG | 3 cut(s) | 42, 118, 139 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 221, 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseBI | CCWGG | 2 cut(s) | 74, 120 |
| BseDI | CCNNGG | 3 cut(s) | 42, 118, 139 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BseSI | GKGCMC | 1 cut(s) | 285 |
| BshFI | GGCC | 2 cut(s) | 25, 77 |
| BsiSI | CCGG | 1 cut(s) | 21 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 32 |
| BsmAI | GTCTC | 3 cut(s) | 70, 192, 241 |
| BsmBI | CGTCTC | 1 cut(s) | 70 |
| BsnI | GGCC | 2 cut(s) | 25, 77 |
| Bsp1286I | GDGCHC | 1 cut(s) | 285 |
| Bsp143I | GATC | 2 cut(s) | 102, 245 |
| BspANI | GGCC | 2 cut(s) | 25, 77 |
| BspLI | GGNNCC | 1 cut(s) | 19 |
| BspQI | GCTCTTC | 1 cut(s) | 42 |
| BssECI | CCNNGG | 3 cut(s) | 42, 118, 139 |
| BssMI | GATC | 2 cut(s) | 102, 245 |
| Bst2UI | CCWGG | 2 cut(s) | 74, 120 |
| Bst6I | CTCTTC | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 30 |
| BstH2I | RGCGCY | 1 cut(s) | 139 |
| BstHHI | GCGC | 1 cut(s) | 138 |
| BstKTI | GATC | 2 cut(s) | 105, 248 |
| BstMAI | GTCTC | 3 cut(s) | 70, 192, 241 |
| BstMBI | GATC | 2 cut(s) | 102, 245 |
| BstNI | CCWGG | 2 cut(s) | 74, 120 |
| BstSCI | CCNGG | 3 cut(s) | 20, 72, 118 |
| BstSLI | GKGCMC | 1 cut(s) | 285 |
| BsuRI | GGCC | 2 cut(s) | 25, 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 226 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| CfoI | GCGC | 1 cut(s) | 138 |
| Cfr13I | GGNCC | 1 cut(s) | 23 |
| CviAII | CATG | 1 cut(s) | 83 |
| CviJI | RGCY | 8 cut(s) | 20, 25, 37, 56, 77, 115, 226, 296 |
| CviKI_1 | RGCY | 8 cut(s) | 20, 25, 37, 56, 77, 115, 226, 296 |
| DpnI | GATC | 2 cut(s) | 104, 247 |
| DpnII | GATC | 2 cut(s) | 102, 245 |
| Eam1104I | CTCTTC | 1 cut(s) | 42 |
| EarI | CTCTTC | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 1 cut(s) | 48 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 30 |
| EcoRII | CCWGG | 2 cut(s) | 72, 118 |
| Esp3I | CGTCTC | 1 cut(s) | 70 |
| FaeI | CATG | 1 cut(s) | 86 |
| FaiI | YATR | 2 cut(s) | 84, 174 |
| FatI | CATG | 1 cut(s) | 82 |
| GlaI | GCGC | 1 cut(s) | 137 |
| GsuI | CTGGAG | 2 cut(s) | 36, 56 |
| HaeII | RGCGCY | 1 cut(s) | 139 |
| HaeIII | GGCC | 2 cut(s) | 25, 77 |
| HapII | CCGG | 1 cut(s) | 21 |
| HhaI | GCGC | 1 cut(s) | 138 |
| Hin1II | CATG | 1 cut(s) | 86 |
| Hin6I | GCGC | 1 cut(s) | 136 |
| HinP1I | GCGC | 1 cut(s) | 136 |
| HinfI | GANTC | 1 cut(s) | 290 |
| HpaII | CCGG | 1 cut(s) | 21 |
| Hpy188I | TCNGA | 3 cut(s) | 46, 245, 289 |
| Hpy188III | TCNNGA | 2 cut(s) | 15, 249 |
| Hpy99I | CGWCG | 1 cut(s) | 65 |
| HpyAV | CCTTC | 1 cut(s) | 26 |
| HpyCH4IV | ACGT | 1 cut(s) | 231 |
| HpyCH4V | TGCA | 2 cut(s) | 184, 301 |
| HpySE526I | ACGT | 1 cut(s) | 231 |
| Hsp92II | CATG | 1 cut(s) | 86 |
| HspAI | GCGC | 1 cut(s) | 136 |
| Kzo9I | GATC | 2 cut(s) | 102, 245 |
| LguI | GCTCTTC | 1 cut(s) | 42 |
| LmnI | GCTCC | 2 cut(s) | 17, 120 |
| LpnPI | CCDG | 9 cut(s) | 34, 39, 59, 86, 105, 132, 240, 268, 278 |
| MaeII | ACGT | 1 cut(s) | 231 |
| MaeIII | GTNAC | 1 cut(s) | 122 |
| MalI | GATC | 2 cut(s) | 104, 247 |
| MboI | GATC | 2 cut(s) | 102, 245 |
| MboII | GAAGA | 3 cut(s) | 17, 41, 59 |
| MhlI | GDGCHC | 1 cut(s) | 285 |
| MnlI | CCTC | 7 cut(s) | 52, 68, 80, 148, 149, 251, 299 |
| MseI | TTAA | 1 cut(s) | 162 |
| MspA1I | CMGCKG | 1 cut(s) | 296 |
| MspI | CCGG | 1 cut(s) | 21 |
| MspR9I | CCNGG | 3 cut(s) | 22, 74, 120 |
| MvaI | CCWGG | 2 cut(s) | 74, 120 |
| NciI | CCSGG | 1 cut(s) | 22 |
| NdeII | GATC | 2 cut(s) | 102, 245 |
| NlaIII | CATG | 1 cut(s) | 86 |
| NlaIV | GGNNCC | 1 cut(s) | 19 |
| NmuCI | GTSAC | 1 cut(s) | 122 |
| PciSI | GCTCTTC | 1 cut(s) | 42 |
| PfeI | GAWTC | 1 cut(s) | 290 |
| PflFI | GACNNNGTC | 1 cut(s) | 233 |
| Psp6I | CCWGG | 2 cut(s) | 72, 118 |
| PspGI | CCWGG | 2 cut(s) | 72, 118 |
| PspN4I | GGNNCC | 1 cut(s) | 19 |
| PspPI | GGNCC | 1 cut(s) | 23 |
| PsyI | GACNNNGTC | 1 cut(s) | 233 |
| PvuII | CAGCTG | 1 cut(s) | 296 |
| SapI | GCTCTTC | 1 cut(s) | 42 |
| SaqAI | TTAA | 1 cut(s) | 162 |
| Sau3AI | GATC | 2 cut(s) | 102, 245 |
| Sau96I | GGNCC | 1 cut(s) | 23 |
| ScrFI | CCNGG | 3 cut(s) | 22, 74, 120 |
| SduI | GDGCHC | 1 cut(s) | 285 |
| SetI | ASST | 7 cut(s) | 44, 117, 159, 234, 267, 298, 310 |
| StyD4I | CCNGG | 3 cut(s) | 20, 72, 118 |
| TaiI | ACGT | 1 cut(s) | 234 |
| TaqI | TCGA | 1 cut(s) | 250 |
| TfiI | GAWTC | 1 cut(s) | 290 |
| Tru1I | TTAA | 1 cut(s) | 162 |
| Tru9I | TTAA | 1 cut(s) | 162 |
| TscAI | CASTG | 1 cut(s) | 226 |
| TseFI | GTSAC | 1 cut(s) | 122 |
| Tsp45I | GTSAC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 1 cut(s) | 261 |
| TspRI | CASTG | 1 cut(s) | 226 |
| Tth111I | GACNNNGTC | 1 cut(s) | 233 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 30 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 80 |