Rroxscaffold_2G00087480
MYB Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0016375
Physical Location & Seq
Reverse (-)
9533049 .. 9535190
2142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00087480.1

Sequence Viewer

Length: 1611 bp
ATGGTTCGAGCTGGTTGCTTATTGATCCCAAAGTTCAAGAACTCTTTTAGGTTTGAAGCATCCGGTGTTTTGGAGAGAACCAACACGAATATATTCCATCAAGCCGTAATTGAGGTTAATGAAGATGGCACAACTGCGGCAGCTGCTACTGTTGCCATATGGGTTGGGGCTTCTGCTCCGTCGCCTCAAGAGATGCAAGACTTTGTGGCCGATCACCCACATTCATGCTTCTCATCAGAGAAGAAAAATTATCCGACTCCCCCACGCTATCATCTTCACCCCGCCCCCACCACTCTGCACCTCCAAAGCCTCACGCCAATTCCTCTGTACCGTCTATTCCTCCAGCTCCAGCTCCAGTCTCCCGCGTCATCCCCACCCCCGCGCGTGCACCTCCACACCCCCCTCTCAAATCCCAATAAACCCAACAGAAAACCAAACCCAGTAACCCACCTCTCTCTCTCTCTGGCGGGGTGGTTGTCCTCTCGTCCCACACCCACCAAGTATGGTGCCGAAATGAAGGAGCGGCAGCGCTGGCAACCGGAAGAAGACGCCCTCCTCCGCGCCTACGTGAAGCAGTATGGCCCCAAAGAATGGGCCCTCGTCTCCCAGCGCATGGCCCAGCCCATCAACCGCGACCCGAAGTCCTGCCTCGAGCGCTGGAAGAATTATCTGAGGCCCGGCCTCAAGAAGGGCTCCCTCTCCCCGGAGGAGCAGTCCTTGGTCATCGAGCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATCGCCGCCGAGCTCCCCGGCCGCACCCCCAAGCGCCTCGGCAAGTGGTGGGAGGTCTTCCGCGAAAAGCAGCTCAAACAACAGCTCACCAAACACAAGCCCGGCTCCGCCGCCGCCTCCGCCTCCCAAGCCTCCACCGCCGCGTCCTCCTCGTCGACTCAGCCCGAGGGGAGCATTCCGGTCGCCGCCGGGATCTCCTCGACGGAGAAGGCCGCGCAGGGGCCGTACGACCACATTTTGGAGACGTTTGCTGAGAAGTACGTCCAGCCCAAGCTCTACGGCGTGATGTCCGAACCCGACCCGCTTCTCTCCCTCGGGTCCACCGCCGCGACGCCTTCCGGTCTGCCGCCGTGGATGAACCCGCCTTCCGCGACGTCGTCCACGTCCTCCACGACGCCTTCTCCTTCGGTGAGCCTGTCGCTTTCGCCGTCGGACCCGGGTTACGACCCGGACCCGACCCGGGTGCAGATGGGTACGCTGGTGCAGTGGTGCAAGGAGGTGGAGGAGGGGAGGCAGAGCTGGGTGCAGCACAAGAAGGAGGCCACGTGGCGGCTGAGCAGGCTGGAGCAGCAGCTGGAGTCGGAGAAGGCGAGGAAGAGGAGGGAGGCGATGGAGGAGATCGAAGCCAAGATAAGGGCGTTGAGGGAAGAAGAGATGGCGTTTATGGGTCGGATTGAGAGCGATTACAGAGAGCAAATGAGCGTTTTGCAGAGAGAGGCGGAGAGCAAGGAGGCCAAGCTGGTGGAAGCTTGGTGCAGTAAGCATGTCAAGCTTGCTAAGCTTGTGGATCAAATTGGGGGTCATGGCCATAATAATCATGCCACTCATGCCTTCACCAGTAAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000793 GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0002682 GO:0003002 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0007275 GO:0007389 GO:0008150 GO:0008356 GO:0009605 GO:0009607 GO:0009615 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009739 GO:0009751 GO:0009753 GO:0009798 GO:0009889 GO:0009890 GO:0009892 GO:0009943 GO:0009944 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010035 GO:0010038 GO:0010338 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0042802 GO:0042803 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045088 GO:0045892 GO:0045934 GO:0046677 GO:0046686 GO:0046983 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048583 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050776 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051301 GO:0051704 GO:0051707 GO:0060255 GO:0065001 GO:0065007 GO:0070013 GO:0080090 GO:0080134 GO:0097159 GO:0098542 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:1905393 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

536

Amino Acids

59.81

Weight (kDa)

9.35

Isoelectric Point (pI)

59.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serpin PF00079 29 - 80 1.1e-07 Serpin (serine protease inhibitor)
Myb_DNA-binding PF00249 175 - 224 4.1e-12 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 178 - 232 1.2e-11 Myb-like DNA-binding domain
Myb_DNA-binding PF00249 230 - 265 3.3e-09 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 234 - 275 1e-07 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016375)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g45380
malus_domestica MD17G1073900.v1.1
pyrus_communis pycom09g01010 pycom17g07470
rosa_chinensis RchiOBHm_Chr2g0163191
rosa_laevigata RLG00000021380
rosa_multiflora Rmu_sc0002045.1_g000038 Rmu_sc0008246.1_g000001
rosa_roxburghii Rroxscaffold_2G00087480
rosa_rugosa Rorug02G0501100
rosa_samantha Rh2AG567600 Rh2BG579700 Rh2CG549600 Rh2DG590000
rosa_wichuraiana Rw2G046990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1139
AccB1I GGYRCC 1 cut(s) 506
AccB7I CCANNNNNTGG 3 cut(s) 591, 613, 1000
AccBSI CCGCTC 1 cut(s) 523
AccI GTMKAC 1 cut(s) 917
AclWI GGATC 3 cut(s) 19, 962, 1557
AcoI YGGCCR 3 cut(s) 207, 781, 1567
AcuI CTGAAG 1 cut(s) 716
AcvI CACGTG 1 cut(s) 1308
AcyI GRCGYC 4 cut(s) 549, 1094, 1136, 1157
AfaI GTAC 5 cut(s) 329, 743, 989, 1022, 1237
AfeI AGCGCT 2 cut(s) 530, 656
AfiI CCNNNNNNNGG 9 cut(s) 591, 613, 688, 703, 981, 1000, 1222, 1311, 1395
AgsI TTSAA 2 cut(s) 37, 56
AhdI GACNNNNNGTC 1 cut(s) 640
AjiI CACGTC 1 cut(s) 1146
AloI GAACNNNNNNTCC 2 cut(s) 1112, 1144
Alw21I GWGCWC 2 cut(s) 390, 777
Alw26I GTCTC 3 cut(s) 363, 607, 998
Alw44I GTGCAC 1 cut(s) 386
AlwI GGATC 3 cut(s) 19, 962, 1557
AlwNI CAGNNNCTG 1 cut(s) 1336
Ama87I CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
Aor51HI AGCGCT 2 cut(s) 530, 656
ApaI GGGCCC 1 cut(s) 598
ApaLI GTGCAC 1 cut(s) 386
ApeKI GCWGC 7 cut(s) 140, 143, 526, 832, 1288, 1330, 1333
ArsI GACNNNNNNTTYG 2 cut(s) 1546, 1578
Asp700I GAANNNNTTC 1 cut(s) 92
AspLEI GCGC 7 cut(s) 384, 531, 563, 612, 657, 798, 979
AspS9I GGNCC 9 cut(s) 581, 594, 595, 616, 675, 983, 1080, 1195, 1213
AsuHPI GGTGA 5 cut(s) 206, 269, 841, 1183, 1588
AvaI CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
AvaII GGWCC 3 cut(s) 1080, 1195, 1213
BaeGI GKGCMC 2 cut(s) 390, 598
BaeI ACNNNNGTAYC 2 cut(s) 1227, 1260
BalI TGGCCA 1 cut(s) 1569
BanI GGYRCC 1 cut(s) 506
BanII GRGCYC 3 cut(s) 598, 695, 777
BbrPI CACGTG 1 cut(s) 1308
BbsI GAAGAC 2 cut(s) 552, 811
Bbv12I GWGCWC 2 cut(s) 390, 777
BbvI GCAGC 7 cut(s) 130, 152, 538, 844, 1300, 1342, 1345
BccI CCATC 6 cut(s) 105, 119, 632, 1225, 1366, 1411
BceAI ACGGC 6 cut(s) 89, 760, 970, 1057, 1096, 1174
BcgI CGANNNNNNTGC 5 cut(s) 31, 925, 959, 1207, 1241
BcoDI GTCTC 3 cut(s) 363, 607, 998
BfoI RGCGCY 3 cut(s) 532, 658, 799
BlpI GCTNAGC 2 cut(s) 1316, 1539
Bme18I GGWCC 3 cut(s) 1080, 1195, 1213
BmeRI GACNNNNNGTC 1 cut(s) 640
BmeT110I CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
BmgBI CACGTC 1 cut(s) 1146
BmgT120I GGNCC 9 cut(s) 581, 594, 595, 616, 675, 983, 1080, 1195, 1213
BmiI GGNNCC 9 cut(s) 508, 583, 596, 694, 868, 984, 1081, 1197, 1215
BmrI ACTGGG 1 cut(s) 434
BmsI GCATC 2 cut(s) 68, 183
BmuI ACTGGG 1 cut(s) 434
BpiI GAAGAC 2 cut(s) 552, 811
BpmI CTGGAG 5 cut(s) 326, 332, 338, 1346, 1358
Bpu1102I GCTNAGC 2 cut(s) 1316, 1539
BpuEI CTTGAG 2 cut(s) 171, 668
BsaAI YACGTR 2 cut(s) 568, 1308
BsaHI GRCGYC 4 cut(s) 549, 1094, 1136, 1157
BsaJI CCNNGG 9 cut(s) 702, 717, 778, 799, 927, 1075, 1112, 1198, 1221
BsaWI WCCGGW 4 cut(s) 62, 538, 940, 1100
BsaXI ACNNNNNCTCC 6 cut(s) 698, 728, 1147, 1177, 1292, 1322
Bsc4I CCNNNNNNNGG 9 cut(s) 591, 613, 688, 703, 981, 1000, 1222, 1311, 1395
Bse1I ACTGG 3 cut(s) 355, 440, 1599
BseDI CCNNGG 9 cut(s) 702, 717, 778, 799, 927, 1075, 1112, 1198, 1221
BseGI GGATG 3 cut(s) 59, 368, 1122
BseLI CCNNNNNNNGG 9 cut(s) 591, 613, 688, 703, 981, 1000, 1222, 1311, 1395
BseMII CTCAG 4 cut(s) 662, 935, 1005, 1307
BseNI ACTGG 3 cut(s) 355, 440, 1599
BseRI GAGGAG 7 cut(s) 545, 722, 901, 949, 1280, 1375, 1391
BseSI GKGCMC 2 cut(s) 390, 598
BseX3I CGGCCG 1 cut(s) 781
BseXI GCAGC 7 cut(s) 130, 152, 538, 844, 1300, 1342, 1345
BseYI CCCAGC 3 cut(s) 606, 618, 1281
BsgI GTGCAG 5 cut(s) 281, 1247, 1265, 1307, 1537
Bsh1285I CGRYCG 2 cut(s) 784, 945
BshNI GGYRCC 1 cut(s) 506
BsiEI CGRYCG 2 cut(s) 784, 945
BsiHKAI GWGCWC 2 cut(s) 390, 777
BsiHKCI CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
BsiWI CGTACG 1 cut(s) 987
BslFI GGGAC 1 cut(s) 471
BslI CCNNNNNNNGG 9 cut(s) 591, 613, 688, 703, 981, 1000, 1222, 1311, 1395
BsmAI GTCTC 3 cut(s) 363, 607, 998
BsmBI CGTCTC 2 cut(s) 607, 998
BsmFI GGGAC 1 cut(s) 471
BsmI GAATGC 1 cut(s) 936
BsoBI CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
Bsp120I GGGCCC 1 cut(s) 594
Bsp1286I GDGCHC 4 cut(s) 390, 598, 695, 777
Bsp143I GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
Bsp1720I GCTNAGC 2 cut(s) 1316, 1539
BspCNI CTCAG 4 cut(s) 663, 934, 1006, 1308
BspLI GGNNCC 9 cut(s) 508, 583, 596, 694, 868, 984, 1081, 1197, 1215
BspPI GGATC 3 cut(s) 19, 962, 1557
BspT107I GGYRCC 1 cut(s) 506
BsrBI CCGCTC 1 cut(s) 523
BsrI ACTGG 3 cut(s) 355, 440, 1599
BssECI CCNNGG 9 cut(s) 702, 717, 778, 799, 927, 1075, 1112, 1198, 1221
BssMI GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
BssNI GRCGYC 4 cut(s) 549, 1094, 1136, 1157
BssT1I CCWWGG 1 cut(s) 717
Bst4CI ACNGT 2 cut(s) 151, 332
Bst6I CTCTTC 2 cut(s) 1352, 1407
BstACI GRCGYC 4 cut(s) 549, 1094, 1136, 1157
BstBAI YACGTR 2 cut(s) 568, 1308
BstC8I GCNNGC 4 cut(s) 386, 533, 1322, 1536
BstDEI CTNAG 5 cut(s) 671, 921, 1014, 1316, 1539
BstDSI CCRYGG 1 cut(s) 1112
BstENI CCTNNNNNAGG 1 cut(s) 686
BstF5I GGATG 3 cut(s) 59, 368, 1122
BstH2I RGCGCY 3 cut(s) 532, 658, 799
BstHHI GCGC 7 cut(s) 384, 531, 563, 612, 657, 798, 979
BstKTI GATC 6 cut(s) 27, 214, 765, 957, 1383, 1552
BstMAI GTCTC 3 cut(s) 363, 607, 998
BstMBI GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
BstMCI CGRYCG 2 cut(s) 784, 945
BstNSI RCATGY 1 cut(s) 1529
BstSLI GKGCMC 2 cut(s) 390, 598
BstV1I GCAGC 7 cut(s) 130, 152, 538, 844, 1300, 1342, 1345
BstV2I GAAGAC 2 cut(s) 552, 811
BstX2I RGATCY 1 cut(s) 954
BstXI CCANNNNNNTGG 1 cut(s) 1504
BstYI RGATCY 1 cut(s) 954
BstZI CGGCCG 1 cut(s) 781
BtgI CCRYGG 1 cut(s) 1112
BtgZI GCGATG 1 cut(s) 1385
BtrI CACGTC 1 cut(s) 1146
BtsCI GGATG 3 cut(s) 59, 368, 1122
BtsI GCAGTG 1 cut(s) 1253
BtsIMutI CAGTG 1 cut(s) 1253
Cac8I GCNNGC 4 cut(s) 386, 533, 1322, 1536
CaiI CAGNNNCTG 1 cut(s) 1336
CfoI GCGC 7 cut(s) 384, 531, 563, 612, 657, 798, 979
Cfr13I GGNCC 9 cut(s) 581, 594, 595, 616, 675, 983, 1080, 1195, 1213
Cfr9I CCCGGG 2 cut(s) 1198, 1221
CseI GACGC 5 cut(s) 354, 557, 894, 1102, 1165
Csp6I GTAC 5 cut(s) 328, 742, 988, 1021, 1236
CviAII CATG 6 cut(s) 225, 613, 1526, 1565, 1580, 1589
CviQI GTAC 5 cut(s) 328, 742, 988, 1021, 1236
DdeI CTNAG 5 cut(s) 671, 921, 1014, 1316, 1539
DpnI GATC 6 cut(s) 26, 213, 764, 956, 1382, 1551
DpnII GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
DriI GACNNNNNGTC 1 cut(s) 640
EaeI YGGCCR 3 cut(s) 207, 781, 1567
EagI CGGCCG 1 cut(s) 781
Eam1104I CTCTTC 2 cut(s) 1352, 1407
Eam1105I GACNNNNNGTC 1 cut(s) 640
EarI CTCTTC 2 cut(s) 1352, 1407
EciI GGCGGA 3 cut(s) 859, 871, 1496
Ecl136II GAGCTC 1 cut(s) 775
EclXI CGGCCG 1 cut(s) 781
Eco130I CCWWGG 1 cut(s) 717
Eco24I GRGCYC 3 cut(s) 598, 695, 777
Eco47I GGWCC 3 cut(s) 1080, 1195, 1213
Eco47III AGCGCT 2 cut(s) 530, 656
Eco52I CGGCCG 1 cut(s) 781
Eco53kI GAGCTC 1 cut(s) 775
Eco57I CTGAAG 1 cut(s) 716
Eco72I CACGTG 1 cut(s) 1308
Eco88I CYCGRG 5 cut(s) 650, 926, 1076, 1198, 1221
EcoICRI GAGCTC 1 cut(s) 775
EcoNI CCTNNNNNAGG 1 cut(s) 686
EcoO109I RGGNCCY 1 cut(s) 595
EcoT14I CCWWGG 1 cut(s) 717
EcoT38I GRGCYC 3 cut(s) 598, 695, 777
ErhI CCWWGG 1 cut(s) 717
Esp3I CGTCTC 2 cut(s) 607, 998
FaeI CATG 6 cut(s) 228, 616, 1529, 1568, 1583, 1592
FaqI GGGAC 1 cut(s) 471
FatI CATG 6 cut(s) 224, 612, 1525, 1564, 1579, 1588
FauI CCCGC 6 cut(s) 289, 370, 387, 460, 1071, 1131
FauNDI CATATG 1 cut(s) 158
FblI GTMKAC 1 cut(s) 917
FokI GGATG 3 cut(s) 46, 355, 1129
FriOI GRGCYC 3 cut(s) 598, 695, 777
GlaI GCGC 7 cut(s) 383, 530, 562, 611, 656, 797, 978
GsaI CCCAGC 3 cut(s) 610, 622, 1285
GsuI CTGGAG 5 cut(s) 326, 332, 338, 1346, 1358
HaeII RGCGCY 3 cut(s) 532, 658, 799
HgaI GACGC 5 cut(s) 354, 557, 894, 1102, 1165
HhaI GCGC 7 cut(s) 384, 531, 563, 612, 657, 798, 979
Hin1I GRCGYC 4 cut(s) 549, 1094, 1136, 1157
Hin1II CATG 6 cut(s) 228, 616, 1529, 1568, 1583, 1592
Hin6I GCGC 7 cut(s) 382, 529, 561, 610, 655, 796, 977
HinP1I GCGC 7 cut(s) 382, 529, 561, 610, 655, 796, 977
HincII GTYRAC 1 cut(s) 918
HindII GTYRAC 1 cut(s) 918
HindIII AAGCTT 3 cut(s) 1509, 1532, 1541
HinfI GANTC 3 cut(s) 256, 919, 1340
HphI GGTGA 5 cut(s) 206, 269, 841, 1183, 1588
Hpy166II GTNNAC 4 cut(s) 388, 918, 1083, 1143
Hpy188I TCNGA 7 cut(s) 238, 255, 672, 1054, 1195, 1345, 1434
Hpy188III TCNNGA 3 cut(s) 37, 188, 685
Hpy8I GTNNAC 4 cut(s) 388, 918, 1083, 1143
Hpy99I CGWCG 8 cut(s) 184, 919, 967, 1096, 1138, 1141, 1159, 1195
HpyCH4III ACNGT 2 cut(s) 151, 332
HpyCH4IV ACGT 6 cut(s) 567, 1007, 1023, 1136, 1145, 1307
HpyCH4V TGCA 9 cut(s) 196, 298, 388, 1228, 1246, 1254, 1288, 1471, 1518
HpyF3I CTNAG 5 cut(s) 671, 921, 1014, 1316, 1539
HpySE526I ACGT 6 cut(s) 567, 1007, 1023, 1136, 1145, 1307
Hsp92I GRCGYC 4 cut(s) 549, 1094, 1136, 1157
Hsp92II CATG 6 cut(s) 228, 616, 1529, 1568, 1583, 1592
HspAI GCGC 7 cut(s) 382, 529, 561, 610, 655, 796, 977
Kzo9I GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
Lsp1109I GCAGC 7 cut(s) 130, 152, 538, 844, 1300, 1342, 1345
LweI GCATC 2 cut(s) 68, 183
MaeII ACGT 6 cut(s) 567, 1007, 1023, 1136, 1145, 1307
MaeIII GTNAC 2 cut(s) 442, 1202
MalI GATC 6 cut(s) 26, 213, 764, 956, 1382, 1551
MbiI CCGCTC 1 cut(s) 523
MboI GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
MflI RGATCY 1 cut(s) 954
MhlI GDGCHC 4 cut(s) 390, 598, 695, 777
MlsI TGGCCA 1 cut(s) 1569
MluCI AATT 6 cut(s) 108, 247, 318, 664, 1554, 1606
MluNI TGGCCA 1 cut(s) 1569
MlyI GAGTC 3 cut(s) 250, 913, 1349
MmeI TCCRAC 4 cut(s) 278, 1173, 1323, 1412
Mox20I TGGCCA 1 cut(s) 1569
MroXI GAANNNNTTC 1 cut(s) 92
MscI TGGCCA 1 cut(s) 1569
MseI TTAA 2 cut(s) 117, 1609
MslI CAYNNNNRTG 1 cut(s) 223
Msp20I TGGCCA 1 cut(s) 1569
MspA1I CMGCKG 2 cut(s) 143, 1336
Mva1269I GAATGC 1 cut(s) 936
NdeI CATATG 1 cut(s) 158
NdeII GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
NlaIII CATG 6 cut(s) 228, 616, 1529, 1568, 1583, 1592
NlaIV GGNNCC 9 cut(s) 508, 583, 596, 694, 868, 984, 1081, 1197, 1215
NmeAIII GCCGAG 2 cut(s) 780, 796
NspI RCATGY 1 cut(s) 1529
PaeR7I CTCGAG 1 cut(s) 650
PcsI WCGNNNNNNNCGW 4 cut(s) 1142, 1151, 1187, 1349
PctI GAATGC 1 cut(s) 936
PdmI GAANNNNTTC 1 cut(s) 92
Pfl23II CGTACG 1 cut(s) 987
PflFI GACNNNGTC 1 cut(s) 1138
PflMI CCANNNNNTGG 3 cut(s) 591, 613, 1000
PleI GAGTC 3 cut(s) 250, 913, 1348
PmaCI CACGTG 1 cut(s) 1308
PmlI CACGTG 1 cut(s) 1308
PpsI GAGTC 3 cut(s) 250, 913, 1348
Ppu21I YACGTR 2 cut(s) 568, 1308
Psp124BI GAGCTC 1 cut(s) 777
PspCI CACGTG 1 cut(s) 1308
PspFI CCCAGC 3 cut(s) 606, 618, 1281
PspLI CGTACG 1 cut(s) 987
PspN4I GGNNCC 9 cut(s) 508, 583, 596, 694, 868, 984, 1081, 1197, 1215
PspOMI GGGCCC 1 cut(s) 594
PspPI GGNCC 9 cut(s) 581, 594, 595, 616, 675, 983, 1080, 1195, 1213
PspXI VCTCGAGB 1 cut(s) 650
PstNI CAGNNNCTG 1 cut(s) 1336
PsuI RGATCY 1 cut(s) 954
PsyI GACNNNGTC 1 cut(s) 1138
PvuII CAGCTG 2 cut(s) 143, 1336
RsaI GTAC 5 cut(s) 329, 743, 989, 1022, 1237
RsaNI GTAC 5 cut(s) 328, 742, 988, 1021, 1236
RseI CAYNNNNRTG 1 cut(s) 223
SacI GAGCTC 1 cut(s) 777
SalI GTCGAC 1 cut(s) 916
SaqAI TTAA 2 cut(s) 117, 1609
Sau3AI GATC 6 cut(s) 24, 211, 762, 954, 1380, 1549
Sau96I GGNCC 9 cut(s) 581, 594, 595, 616, 675, 983, 1080, 1195, 1213
SchI GAGTC 3 cut(s) 250, 913, 1349
SduI GDGCHC 4 cut(s) 390, 598, 695, 777
SfaNI GCATC 2 cut(s) 68, 183
Sfr274I CTCGAG 1 cut(s) 650
SinI GGWCC 3 cut(s) 1080, 1195, 1213
SlaI CTCGAG 1 cut(s) 650
SmaI CCCGGG 2 cut(s) 1200, 1223
SmiMI CAYNNNNRTG 1 cut(s) 223
SmlI CTYRAG 3 cut(s) 186, 650, 683
SmoI CTYRAG 3 cut(s) 186, 650, 683
Sse9I AATT 6 cut(s) 108, 247, 318, 664, 1554, 1606
SstI GAGCTC 1 cut(s) 777
StyI CCWWGG 1 cut(s) 717
TaaI ACNGT 2 cut(s) 151, 332
TaiI ACGT 6 cut(s) 570, 1010, 1026, 1139, 1148, 1310
TaqI TCGA 6 cut(s) 7, 651, 726, 917, 962, 1383
TasI AATT 6 cut(s) 108, 247, 318, 664, 1554, 1606
Tru1I TTAA 2 cut(s) 117, 1609
Tru9I TTAA 2 cut(s) 117, 1609
TscAI CASTG 1 cut(s) 1253
TseI GCWGC 7 cut(s) 140, 143, 526, 832, 1288, 1330, 1333
TspDTI ATGAA 4 cut(s) 135, 213, 530, 1133
TspGWI ACGGA 2 cut(s) 168, 980
TspMI CCCGGG 2 cut(s) 1198, 1221
TspRI CASTG 1 cut(s) 1253
Tth111I GACNNNGTC 1 cut(s) 1138
Van91I CCANNNNNTGG 3 cut(s) 591, 613, 1000
VneI GTGCAC 1 cut(s) 386
VpaK11BI GGWCC 3 cut(s) 1080, 1195, 1213
XagI CCTNNNNNAGG 1 cut(s) 686
XceI RCATGY 1 cut(s) 1529
XhoI CTCGAG 1 cut(s) 650
XmaI CCCGGG 2 cut(s) 1198, 1221
XmiI GTMKAC 1 cut(s) 917
XmnI GAANNNNTTC 1 cut(s) 92
ZraI GACGTC 1 cut(s) 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.