pycom09g08740

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
6829716 .. 6830086
371 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g08740.2

Sequence Viewer

Length: 210 bp
ATGTGGGTGATCCTGCTACCCTATACGCGGCGGTACAGGGCTGTAACAAGATTATCTATTGTGCTACTGCACGCTCTACTATCAGTGGAGACCTCTACAGAGTTGATCAAAGAGGGGTCTACAACCTCACCAAAGCATTCCAGGACTATAACAACAAAATGGCACAGTTACGAGCAGGAAAGAGTAGCAAGAGCAAACTTACTCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

8.04

Weight (kDa)

10.26

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024650)

Species Orthologous Gene IDs
pyrus_communis pycom06g17730 pycom07g01310 pycom09g08740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 119
AccII CGCG 1 cut(s) 28
AciI CCGC 2 cut(s) 28, 31
AclWI GGATC 1 cut(s) 4
AfaI GTAC 1 cut(s) 35
AfiI CCNNNNNNNGG 1 cut(s) 27
AjnI CCWGG 1 cut(s) 140
Alw26I GTCTC 1 cut(s) 83
AlwI GGATC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 19, 120
BciT130I CCWGG 1 cut(s) 142
BclI TGATCA 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 83
BfmI CTRYAG 1 cut(s) 96
BisI GCNGC 1 cut(s) 29
BlsI GCNGC 1 cut(s) 30
Bme1390I CCNGG 1 cut(s) 142
BmrFI CCNGG 1 cut(s) 142
BsaI GGTCTC 1 cut(s) 83
Bsc4I CCNNNNNNNGG 1 cut(s) 27
BseBI CCWGG 1 cut(s) 142
BseLI CCNNNNNNNGG 1 cut(s) 27
BsgI GTGCAG 1 cut(s) 53
Bsh1236I CGCG 1 cut(s) 28
BslI CCNNNNNNNGG 1 cut(s) 27
BsmAI GTCTC 1 cut(s) 83
BsmI GAATGC 1 cut(s) 136
Bso31I GGTCTC 1 cut(s) 83
Bsp143I GATC 2 cut(s) 9, 105
BspACI CCGC 2 cut(s) 28, 31
BspFNI CGCG 1 cut(s) 28
BspPI GGATC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 83
BssMI GATC 2 cut(s) 9, 105
Bst2UI CCWGG 1 cut(s) 142
Bst4CI ACNGT 1 cut(s) 167
BstC8I GCNNGC 1 cut(s) 72
BstFNI CGCG 1 cut(s) 28
BstKTI GATC 2 cut(s) 12, 108
BstMAI GTCTC 1 cut(s) 83
BstMBI GATC 2 cut(s) 9, 105
BstNI CCWGG 1 cut(s) 142
BstSCI CCNGG 1 cut(s) 140
BstSFI CTRYAG 1 cut(s) 96
BstUI CGCG 1 cut(s) 28
BtsIMutI CAGTG 1 cut(s) 90
Cac8I GCNNGC 1 cut(s) 72
Csp6I GTAC 1 cut(s) 34
CviJI RGCY 1 cut(s) 41
CviKI_1 RGCY 1 cut(s) 41
CviQI GTAC 1 cut(s) 34
DpnI GATC 2 cut(s) 11, 107
DpnII GATC 2 cut(s) 9, 105
Eco31I GGTCTC 1 cut(s) 83
EcoRII CCWGG 1 cut(s) 140
FaiI YATR 2 cut(s) 24, 149
FbaI TGATCA 1 cut(s) 105
FblI GTMKAC 1 cut(s) 119
Fnu4HI GCNGC 1 cut(s) 29
Fsp4HI GCNGC 1 cut(s) 29
GluI GCNGC 1 cut(s) 29
HphI GGTGA 2 cut(s) 19, 120
Hpy166II GTNNAC 1 cut(s) 120
Hpy8I GTNNAC 1 cut(s) 120
HpyCH4III ACNGT 1 cut(s) 167
HpyCH4V TGCA 1 cut(s) 70
Ksp22I TGATCA 1 cut(s) 105
Kzo9I GATC 2 cut(s) 9, 105
LpnPI CCDG 5 cut(s) 22, 26, 127, 154, 161
MaeIII GTNAC 2 cut(s) 43, 167
MalI GATC 2 cut(s) 11, 107
MboI GATC 2 cut(s) 9, 105
MnlI CCTC 3 cut(s) 103, 106, 136
MspR9I CCNGG 1 cut(s) 142
Mva1269I GAATGC 1 cut(s) 136
MvaI CCWGG 1 cut(s) 142
MvnI CGCG 1 cut(s) 28
NdeII GATC 2 cut(s) 9, 105
PctI GAATGC 1 cut(s) 136
PfoI TCCNGGA 1 cut(s) 140
PkrI GCNGC 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 140
PspGI CCWGG 1 cut(s) 140
RsaI GTAC 1 cut(s) 35
RsaNI GTAC 1 cut(s) 34
SatI GCNGC 1 cut(s) 29
Sau3AI GATC 2 cut(s) 9, 105
ScrFI CCNGG 1 cut(s) 142
SetI ASST 2 cut(s) 95, 128
SfcI CTRYAG 1 cut(s) 96
SsiI CCGC 2 cut(s) 28, 31
StyD4I CCNGG 1 cut(s) 140
TaaI ACNGT 1 cut(s) 167
TauI GCSGC 1 cut(s) 31
TscAI CASTG 1 cut(s) 90
TspRI CASTG 1 cut(s) 90
XmiI GTMKAC 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.