pycom10g11980

RESISTANCE protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
15583233 .. 15584924
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g11980.2

Sequence Viewer

Length: 210 bp
ATGACGAAGGAAGGAGATGGTCTGGAGCTAAAGTCCGGCATCATGATAGCGAGGCTTGGAACGATAGCGTTTCGGAGTCATGGTGATGGAGGTTTCCTGGTGTTGCCAGCAGGGGAAGCCTCCAAGCCATTGCCATTTTTCAAAGCCCTCTCTCTCTGTCTGTCAGTGTATGAGCTCCGTGTTGCCACGTCATTCTCCAAAGTGGACTAA

Protein Analysis

70

Amino Acids

7.35

Weight (kDa)

7.91

Isoelectric Point (pI)

19.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028197)

Species Orthologous Gene IDs
malus_domestica MD10G1135200.v1.1
pyrus_communis pycom10g11980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 142
AjiI CACGTC 1 cut(s) 189
AjnI CCWGG 1 cut(s) 96
AluBI AGCT 2 cut(s) 28, 175
AluI AGCT 2 cut(s) 28, 175
Alw21I GWGCWC 1 cut(s) 177
AsuHPI GGTGA 1 cut(s) 95
BanII GRGCYC 1 cut(s) 177
Bbv12I GWGCWC 1 cut(s) 177
BccI CCATC 2 cut(s) 11, 80
BciT130I CCWGG 1 cut(s) 98
Bme1390I CCNGG 1 cut(s) 98
BmgBI CACGTC 1 cut(s) 189
BmrFI CCNGG 1 cut(s) 98
BmsI GCATC 1 cut(s) 48
BpmI CTGGAG 1 cut(s) 44
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 67, 97
Bse3DI GCAATG 1 cut(s) 128
BseBI CCWGG 1 cut(s) 98
BseMI GCAATG 1 cut(s) 128
BsiHKAI GWGCWC 1 cut(s) 177
BsiSI CCGG 1 cut(s) 36
Bsp1286I GDGCHC 1 cut(s) 177
BspHI TCATGA 1 cut(s) 42
BsrDI GCAATG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 98
BstC8I GCNNGC 1 cut(s) 108
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 96
BtrI CACGTC 1 cut(s) 189
BtsIMutI CAGTG 1 cut(s) 171
Cac8I GCNNGC 1 cut(s) 108
CciI TCATGA 1 cut(s) 42
CviAII CATG 2 cut(s) 43, 80
CviJI RGCY 6 cut(s) 28, 55, 119, 127, 146, 175
CviKI_1 RGCY 6 cut(s) 28, 55, 119, 127, 146, 175
Ecl136II GAGCTC 1 cut(s) 175
Eco24I GRGCYC 1 cut(s) 177
Eco53kI GAGCTC 1 cut(s) 175
EcoICRI GAGCTC 1 cut(s) 175
EcoRII CCWGG 1 cut(s) 96
EcoT38I GRGCYC 1 cut(s) 177
FaeI CATG 2 cut(s) 46, 83
FaiI YATR 3 cut(s) 44, 81, 171
FatI CATG 2 cut(s) 42, 79
FriOI GRGCYC 1 cut(s) 177
GsuI CTGGAG 1 cut(s) 44
HapII CCGG 1 cut(s) 36
Hin1II CATG 2 cut(s) 46, 83
HinfI GANTC 1 cut(s) 76
HpaII CCGG 1 cut(s) 36
HphI GGTGA 1 cut(s) 95
Hpy166II GTNNAC 1 cut(s) 205
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 2 cut(s) 23, 43
Hpy8I GTNNAC 1 cut(s) 205
HpyAV CCTTC 1 cut(s) 5
HpyCH4IV ACGT 1 cut(s) 188
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpySE526I ACGT 1 cut(s) 188
Hsp92II CATG 2 cut(s) 46, 83
LmnI GCTCC 2 cut(s) 25, 180
LpnPI CCDG 6 cut(s) 8, 49, 83, 96, 110, 120
LweI GCATC 1 cut(s) 48
MaeII ACGT 1 cut(s) 188
MhlI GDGCHC 1 cut(s) 177
MlyI GAGTC 1 cut(s) 85
MnlI CCTC 4 cut(s) 45, 83, 130, 158
MslI CAYNNNNRTG 1 cut(s) 84
MspI CCGG 1 cut(s) 36
MspR9I CCNGG 1 cut(s) 98
MvaI CCWGG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 116
NlaIII CATG 2 cut(s) 46, 83
PagI TCATGA 1 cut(s) 42
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
Psp124BI GAGCTC 1 cut(s) 177
Psp6I CCWGG 1 cut(s) 96
PspGI CCWGG 1 cut(s) 96
RseI CAYNNNNRTG 1 cut(s) 84
SacI GAGCTC 1 cut(s) 177
SchI GAGTC 1 cut(s) 85
ScrFI CCNGG 1 cut(s) 98
SduI GDGCHC 1 cut(s) 177
SetI ASST 4 cut(s) 30, 94, 177, 191
SfaNI GCATC 1 cut(s) 48
SmiMI CAYNNNNRTG 1 cut(s) 84
SstI GAGCTC 1 cut(s) 177
StyD4I CCNGG 1 cut(s) 96
TaiI ACGT 1 cut(s) 191
TscAI CASTG 1 cut(s) 171
TspGWI ACGGA 1 cut(s) 167
TspRI CASTG 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.