Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0013347

Physical Location & Seq

Genomic Coordinates Reverse (-)

28139423 .. 28141321

Gene Structure 1899 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g27040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

ATGGATTTGCATTTGAAGAACTTGTTCGATAGATTCCAGGAGCAATTTGGGTCCGGTCCGGGGCTTGGTCCCGGATCAGGGACATGTCTTATGAATGTGGAAGGCATTGCTCCAAATTTTATCAAGTCCATCTACAAAGCTTCAGCAGCTCTGTATAGGACCGATCCCTGGAAAAGGTTGTGTCCCGGGCATATTTTTGGTGTTCGGGTTGGGAAAGATACCGATTGGTCTGGCAAGAAACAGCCATTTCCGTGTGTTCAATTCGTTGGAGGGGATGGTGGCGATATAGGGTTTCATATGTTTCGGTCTCAAAGTGATGCAAAGAAGATGACTGTCTCGAGAGAGACAGTTCAGGTGCCAAATGTTGAGCTTTTACGGGTCACATATGAACGGGAGGCATTGATGTTTCCCTCGAATAGGAAAATGATCAAATCTTTGTCACTCGAAGTGTCAGGGATCGATCGCTTCCCTGTCATTGATGTTGCCAGATGCACGTCATCAGGGAGTCTTAGGTTTAGGCATCCGAGTTCTGAAGAGCTTAAGTTTGTGTATGCATTCATGAAAGCCATAGCTCTGGTGCACCCATTGCTGCAGGAGGACAAAGAAGGCGGTCCAAAGTGGTCAAGGTTAATGCACTTTGAACCGTTTATTGAAACAGTTGATGTTCAGTGGCCACAAGAAATGGCCAAAGGTTATGATCTTGTTGCAGTTACAATTTCGCACCCACCTGGCCAGGCATACGAAGAGAAGGCTAGTACAACGGCTAGCTCAACCCCAACCAAATATGCAGAACTGTCAAAAGAGGAGAGTTTTGTTGATATAAGAGTCTACTTAAATGGCAGCTTGAAGCAGTGTGCAGCATGTGAGAAAGAAATCCACAGTGAACAGGCTCTCTCTTGTGGACGATGTCGAGCTGTGGTCTACTGTAGTTCTGTCTGCCAGAAGCAGCATACGAAAGAAACACATAAGAGTATGTGCGGTCTTTACAAGGCTATGATGGAAAGGGAAGAAGAGCTTGAGATGAACATCTTCATGTTCGCTTGTGATGCTGATCAACCTTGTAAATGGCTTGAATCATTGGGCATCCATCAGAAGGGCATGTGGAGGAGAAAGTGCAGTTGCTATTCTCATTGCCCTTTCGGTCTTCTTCCTGTTAAAGGTGGACTCTGGGATGCTTGGGGAGGGCTCAATGATGAAGAGTTTCCACGCGACTCATCTTTTCAACATCATGTAAGAGATGGTATGTCGAGTCCAATCCTCCTCTCTGGTTGGTCGGAATACTACAACCTTCGGTCACTGCCATTGTCAAGCCCTGTTGCTGATATCCTCTCTCACCCATTGACGGTTTATTACATATTAACGACTCTCAACATCAGCTCAAAGAACTTACTGCAGAAGGGCAAGGAGGTGATTGTTCACTACCTAGGGCCAGAGGGAGAGTTGGATTGGATGCCGGCATTTGCAGAGGTTGGTCATTTGCTCAATGGATTGGGGAACGTGCAAATTGTTATGGTAGGTTCTGAAGTTCCAACAAATTTGTCGGGGACAACTTCAGGTATCGGTAGCAGGGTGAGGGTGAATCTTGTCAGGGGTGTTTATCAGGAGGAAGCCTCCTACCTACCTCCACCCCATGTCATTGTTGCACTGAACTGTGGATTGGATAGCTATGCAAATTGGGGTGGAGCTCTTAATTCAATCAAGTCCATGGCCGTCCCAGCATTCTTCACTGATCAATCTGAACTCTCGTGCGCAAATGCTAAACAGGCTCTACGAAGTGCTGGACTGCATATCACACATCCTGTGACTCCAAATCCTTTCCGCTCGCCGGTGAAACATCACGAGCCTTCCAGCAATCTTCCTTCGTACAGCAATGGTTTTGTGCTTGGAGTAAATACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0007276 GO:0007281 GO:0007283 GO:0007286 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0019899 GO:0019953 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0042826 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0044703 GO:0045892 GO:0045934 GO:0048232 GO:0048468 GO:0048515 GO:0048519 GO:0048523 GO:0048609 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0060255 GO:0065007 GO:0080090 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-MYND

Protein Analysis

633

Amino Acids

70.15

Weight (kDa)

6.89

Isoelectric Point (pI)

53.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	285 - 326	2e-07	MYND finger
MSS51_C	PF20179	446 - 612	2.6e-29	MSS51 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013347)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21890
fragaria_vesca	FvH4_3g02321
malus_domestica	MD05G1343800.v1.1 MD10G1319500.v1.1
prunus_persica	Prupe.4G023000_v2.0.a1
pyrus_communis	pycom05g31320 pycom10g27040
rosa_chinensis	RchiOBHm_Chr5g0003541
rosa_laevigata	RLG00000031150
rosa_multiflora	Rmu_co8496165.1_g000001 Rmu_sc0004279.1_g000009
rosa_roxburghii	Rroxscaffold_1G00072420
rosa_rugosa	Rorug04G0404000
rosa_samantha	Rh5AG031100 Rh5BG030200 Rh5CG033600 Rh5DG030800
rosa_wichuraiana	Rw5G002900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1750
AccB1I	GGYRCC	1 cut(s)	355
AccBSI	CCGCTC	1 cut(s)	1821
AccI	GTMKAC	2 cut(s)	828, 921
AccII	CGCG	1 cut(s)	1209
AciI	CCGC	3 cut(s)	609, 978, 1819
AclWI	GGATC	3 cut(s)	82, 158, 464
AcoI	YGGCCR	4 cut(s)	671, 684, 730, 1707
AcsI	RAATTY	2 cut(s)	115, 1534
AcuI	CTGAAG	4 cut(s)	126, 552, 1536, 1542
AfaI	GTAC	2 cut(s)	757, 1865
AflII	CTTAAG	1 cut(s)	539
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	8 cut(s)	16, 260, 641, 653, 847, 1073, 1223, 1695
AjiI	CACGTC	1 cut(s)	495
AjnI	CCWGG	4 cut(s)	36, 167, 727, 732
AjuI	GAANNNNNNNTTGG	2 cut(s)	1640, 1672
Alw21I	GWGCWC	2 cut(s)	582, 1687
Alw26I	GTCTC	3 cut(s)	312, 338, 340
Alw44I	GTGCAC	1 cut(s)	578
AlwI	GGATC	3 cut(s)	82, 158, 464
Ama87I	CYCGRG	2 cut(s)	185, 337
AoxI	GGCC	5 cut(s)	671, 684, 730, 1427, 1707
ApaLI	GTGCAC	1 cut(s)	578
ApeKI	GCWGC	5 cut(s)	146, 589, 840, 857, 946
ApoI	RAATTY	2 cut(s)	115, 1534
Asp700I	GAANNNNTTC	3 cut(s)	23, 1028, 1200
AspA2I	CCTAGG	1 cut(s)	1423
AspLEI	GCGC	1 cut(s)	1751
AspS9I	GGNCC	6 cut(s)	51, 56, 68, 159, 611, 1427
AsuC2I	CCSGG	4 cut(s)	60, 72, 186, 187
AsuHPI	GGTGA	5 cut(s)	1325, 1420, 1582, 1588, 1840
AsuNHI	GCTAGC	1 cut(s)	764
AvaI	CYCGRG	2 cut(s)	185, 337
AvaII	GGWCC	5 cut(s)	51, 56, 68, 159, 611
AvrII	CCTAGG	1 cut(s)	1423
BaeGI	GKGCMC	1 cut(s)	582
BalI	TGGCCA	3 cut(s)	673, 686, 732
BanI	GGYRCC	1 cut(s)	355
BanII	GRGCYC	2 cut(s)	1188, 1687
BauI	CACGAG	2 cut(s)	1744, 1838
BbsI	GAAGAC	1 cut(s)	1136
Bbv12I	GWGCWC	2 cut(s)	582, 1687
BbvI	GCAGC	5 cut(s)	158, 576, 852, 869, 958
BccI	CCATC	5 cut(s)	137, 269, 991, 1095, 1232
BceAI	ACGGC	2 cut(s)	777, 1694
BciT130I	CCWGG	4 cut(s)	38, 169, 729, 734
BclI	TGATCA	3 cut(s)	426, 1051, 1729
BcnI	CCSGG	4 cut(s)	60, 72, 186, 187
BcoDI	GTCTC	3 cut(s)	312, 338, 340
BfaI	CTAG	3 cut(s)	753, 765, 1424
BfmI	CTRYAG	3 cut(s)	590, 925, 1391
BfrI	CTTAAG	1 cut(s)	539
BisI	GCNGC	5 cut(s)	147, 590, 841, 858, 947
BlnI	CCTAGG	1 cut(s)	1423
BlsI	GCNGC	5 cut(s)	148, 591, 842, 859, 948
Bme1390I	CCNGG	8 cut(s)	38, 60, 72, 169, 186, 187, 729, 734
Bme18I	GGWCC	5 cut(s)	51, 56, 68, 159, 611
BmeT110I	CYCGRG	2 cut(s)	185, 337
BmgBI	CACGTC	1 cut(s)	495
BmgT120I	GGNCC	6 cut(s)	51, 56, 68, 159, 611, 1427
BmiI	GGNNCC	3 cut(s)	52, 70, 357
BmrFI	CCNGG	8 cut(s)	38, 60, 72, 169, 186, 187, 729, 734
BmsI	GCATC	7 cut(s)	307, 479, 529, 1036, 1092, 1162, 1440
BmtI	GCTAGC	1 cut(s)	768
BpiI	GAAGAC	1 cut(s)	1136
BplI	GAGNNNNNCTC	2 cut(s)	1595, 1627
BpuEI	CTTGAG	1 cut(s)	1037
BpuMI	CCSGG	4 cut(s)	60, 72, 186, 187
Bsa29I	ATCGAT	1 cut(s)	459
BsaBI	GATNNNNATC	2 cut(s)	1025, 1050
BsaI	GGTCTC	1 cut(s)	312
BsaJI	CCNNGG	5 cut(s)	59, 167, 185, 1423, 1704
BsaWI	WCCGGW	1 cut(s)	53
Bse118I	RCCGGY	2 cut(s)	1453, 1825
Bse3DI	GCAATG	4 cut(s)	105, 584, 1129, 1876
Bse8I	GATNNNNATC	2 cut(s)	1025, 1050
BseBI	CCWGG	4 cut(s)	38, 169, 729, 734
BseCI	ATCGAT	1 cut(s)	459
BseDI	CCNNGG	5 cut(s)	59, 167, 185, 1423, 1704
BseGI	GGATG	6 cut(s)	280, 520, 1083, 1177, 1455, 1795
BseJI	GATNNNNATC	2 cut(s)	1025, 1050
BseMI	GCAATG	4 cut(s)	105, 584, 1129, 1876
BseRI	GAGGAG	3 cut(s)	818, 1120, 1250
BseSI	GKGCMC	1 cut(s)	582
BseXI	GCAGC	5 cut(s)	158, 576, 852, 869, 958
BseYI	CCCAGC	1 cut(s)	1714
BsgI	GTGCAG	2 cut(s)	876, 1135
Bsh1236I	CGCG	1 cut(s)	1209
Bsh1285I	CGRYCG	1 cut(s)	463
BshFI	GGCC	5 cut(s)	673, 686, 732, 1429, 1709
BshNI	GGYRCC	1 cut(s)	355
BshVI	ATCGAT	1 cut(s)	459
BsiEI	CGRYCG	1 cut(s)	463
BsiHKAI	GWGCWC	2 cut(s)	582, 1687
BsiHKCI	CYCGRG	2 cut(s)	185, 337
BsiSI	CCGG	6 cut(s)	54, 59, 72, 186, 1454, 1826
BslFI	GGGAC	5 cut(s)	54, 94, 168, 1558, 1697
BsmAI	GTCTC	3 cut(s)	312, 338, 340
BsmFI	GGGAC	5 cut(s)	54, 94, 168, 1558, 1697
BsmI	GAATGC	2 cut(s)	554, 1718
BsnI	GGCC	5 cut(s)	673, 686, 732, 1429, 1709
Bso31I	GGTCTC	1 cut(s)	312
BsoBI	CYCGRG	2 cut(s)	185, 337
Bsp1286I	GDGCHC	3 cut(s)	582, 1188, 1687
Bsp143I	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
Bsp19I	CCATGG	1 cut(s)	1704
BspACI	CCGC	3 cut(s)	609, 978, 1819
BspANI	GGCC	5 cut(s)	673, 686, 732, 1429, 1709
BspDI	ATCGAT	1 cut(s)	459
BspFNI	CGCG	1 cut(s)	1209
BspHI	TCATGA	1 cut(s)	558
BspLI	GGNNCC	3 cut(s)	52, 70, 357
BspMAI	CTGCAG	2 cut(s)	594, 1395
BspOI	GCTAGC	1 cut(s)	768
BspPI	GGATC	3 cut(s)	82, 158, 464
BspQI	GCTCTTC	2 cut(s)	528, 1005
BspT107I	GGYRCC	1 cut(s)	355
BspTI	CTTAAG	1 cut(s)	539
BspTNI	GGTCTC	1 cut(s)	312
BsrBI	CCGCTC	1 cut(s)	1821
BsrDI	GCAATG	4 cut(s)	105, 584, 1129, 1876
BsrFI	RCCGGY	2 cut(s)	1453, 1825
BssAI	RCCGGY	2 cut(s)	1453, 1825
BssECI	CCNNGG	5 cut(s)	59, 167, 185, 1423, 1704
BssMI	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
BssSI	CACGAG	2 cut(s)	1744, 1838
BssT1I	CCWWGG	2 cut(s)	1423, 1704
Bst2BI	CACGAG	2 cut(s)	1744, 1838
Bst2UI	CCWGG	4 cut(s)	38, 169, 729, 734
Bst4CI	ACNGT	9 cut(s)	334, 349, 645, 658, 795, 881, 926, 1345, 1652
Bst6I	CTCTTC	4 cut(s)	528, 738, 1005, 1191
BstAFI	CTTAAG	1 cut(s)	539
BstAPI	GCANNNNNTGC	1 cut(s)	586
BstC8I	GCNNGC	3 cut(s)	766, 1455, 1823
BstDEI	CTNAG	1 cut(s)	509
BstDSI	CCRYGG	1 cut(s)	1704
BstENI	CCTNNNNNAGG	3 cut(s)	172, 415, 1155
BstF5I	GGATG	6 cut(s)	280, 520, 1083, 1177, 1455, 1795
BstFNI	CGCG	1 cut(s)	1209
BstHHI	GCGC	1 cut(s)	1751
BstKTI	GATC	8 cut(s)	77, 166, 429, 459, 463, 700, 1054, 1732
BstMAI	GTCTC	3 cut(s)	312, 338, 340
BstMBI	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
BstMCI	CGRYCG	1 cut(s)	463
BstMWI	GCNNNNNNNGC	5 cut(s)	146, 586, 1046, 1715, 1763
BstNI	CCWGG	4 cut(s)	38, 169, 729, 734
BstNSI	RCATGY	3 cut(s)	87, 864, 1102
BstSCI	CCNGG	8 cut(s)	36, 58, 70, 167, 184, 185, 727, 732
BstSFI	CTRYAG	3 cut(s)	590, 925, 1391
BstSLI	GKGCMC	1 cut(s)	582
BstUI	CGCG	1 cut(s)	1209
BstV1I	GCAGC	5 cut(s)	158, 576, 852, 869, 958
BstV2I	GAAGAC	1 cut(s)	1136
BstXI	CCANNNNNNTGG	1 cut(s)	574
Bsu15I	ATCGAT	1 cut(s)	459
BsuRI	GGCC	5 cut(s)	673, 686, 732, 1429, 1709
BsuTUI	ATCGAT	1 cut(s)	459
BtgI	CCRYGG	1 cut(s)	1704
BtrI	CACGTC	1 cut(s)	495
BtsCI	GGATG	6 cut(s)	280, 520, 1083, 1177, 1455, 1795
BtsI	GCAGTG	2 cut(s)	857, 1295
BtsIMutI	CAGTG	6 cut(s)	674, 857, 886, 1295, 1643, 1725
Cac8I	GCNNGC	3 cut(s)	766, 1455, 1823
CciI	TCATGA	1 cut(s)	558
CfoI	GCGC	1 cut(s)	1751
Cfr10I	RCCGGY	2 cut(s)	1453, 1825
Cfr13I	GGNCC	6 cut(s)	51, 56, 68, 159, 611, 1427
Cfr9I	CCCGGG	1 cut(s)	185
ClaI	ATCGAT	1 cut(s)	459
CpoI	CGGWCCG	1 cut(s)	56
Csp6I	GTAC	2 cut(s)	756, 1864
CspI	CGGWCCG	1 cut(s)	56
CviAII	CATG	9 cut(s)	84, 559, 861, 1033, 1099, 1229, 1631, 1705, 1896
CviQI	GTAC	2 cut(s)	756, 1864
DdeI	CTNAG	1 cut(s)	509
DpnI	GATC	8 cut(s)	76, 165, 428, 458, 462, 699, 1053, 1731
DpnII	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
EaeI	YGGCCR	4 cut(s)	671, 684, 730, 1707
Eam1104I	CTCTTC	4 cut(s)	528, 738, 1005, 1191
EarI	CTCTTC	4 cut(s)	528, 738, 1005, 1191
Ecl136II	GAGCTC	1 cut(s)	1685
Eco130I	CCWWGG	2 cut(s)	1423, 1704
Eco24I	GRGCYC	2 cut(s)	1188, 1687
Eco31I	GGTCTC	1 cut(s)	312
Eco32I	GATATC	1 cut(s)	1324
Eco47I	GGWCC	5 cut(s)	51, 56, 68, 159, 611
Eco53kI	GAGCTC	1 cut(s)	1685
Eco57I	CTGAAG	4 cut(s)	126, 552, 1536, 1542
Eco88I	CYCGRG	2 cut(s)	185, 337
EcoICRI	GAGCTC	1 cut(s)	1685
EcoNI	CCTNNNNNAGG	3 cut(s)	172, 415, 1155
EcoRII	CCWGG	4 cut(s)	36, 167, 727, 732
EcoRV	GATATC	1 cut(s)	1324
EcoT14I	CCWWGG	2 cut(s)	1423, 1704
EcoT22I	ATGCAT	1 cut(s)	556
EcoT38I	GRGCYC	2 cut(s)	1188, 1687
ErhI	CCWWGG	2 cut(s)	1423, 1704
FaeI	CATG	9 cut(s)	87, 562, 864, 1036, 1102, 1232, 1634, 1708, 1899
FalI	AAGNNNNNCTT	2 cut(s)	999, 1031
FaqI	GGGAC	5 cut(s)	54, 94, 168, 1558, 1697
FatI	CATG	9 cut(s)	83, 558, 860, 1032, 1098, 1228, 1630, 1704, 1895
FauNDI	CATATG	2 cut(s)	297, 385
FbaI	TGATCA	3 cut(s)	426, 1051, 1729
FblI	GTMKAC	2 cut(s)	828, 921
Fnu4HI	GCNGC	5 cut(s)	147, 590, 841, 858, 947
FokI	GGATG	6 cut(s)	287, 507, 1070, 1184, 1462, 1782
FriOI	GRGCYC	2 cut(s)	1188, 1687
Fsp4HI	GCNGC	5 cut(s)	147, 590, 841, 858, 947
FspBI	CTAG	3 cut(s)	753, 765, 1424
FspI	TGCGCA	1 cut(s)	1750
GlaI	GCGC	1 cut(s)	1750
GluI	GCNGC	5 cut(s)	147, 590, 841, 858, 947
GsaI	CCCAGC	1 cut(s)	1718
HaeIII	GGCC	5 cut(s)	673, 686, 732, 1429, 1709
HapII	CCGG	6 cut(s)	54, 59, 72, 186, 1454, 1826
HhaI	GCGC	1 cut(s)	1751
Hin1II	CATG	9 cut(s)	87, 562, 864, 1036, 1102, 1232, 1634, 1708, 1899
Hin6I	GCGC	1 cut(s)	1749
HinP1I	GCGC	1 cut(s)	1749
HindIII	AAGCTT	1 cut(s)	138
HpaII	CCGG	6 cut(s)	54, 59, 72, 186, 1454, 1826
HphI	GGTGA	5 cut(s)	1325, 1420, 1582, 1588, 1840
Hpy166II	GTNNAC	7 cut(s)	580, 829, 884, 902, 922, 1163, 1417
Hpy188I	TCNGA	6 cut(s)	525, 532, 1092, 1276, 1522, 1738
Hpy188III	TCNNGA	5 cut(s)	337, 339, 559, 1601, 1838
Hpy8I	GTNNAC	7 cut(s)	580, 829, 884, 902, 922, 1163, 1417
HpyAV	CCTTC	8 cut(s)	95, 599, 742, 1087, 1298, 1390, 1854, 1869
HpyCH4III	ACNGT	9 cut(s)	334, 349, 645, 658, 795, 881, 926, 1345, 1652
HpyCH4IV	ACGT	2 cut(s)	494, 1497
HpyF10VI	GCNNNNNNNGC	5 cut(s)	146, 586, 1046, 1715, 1763
HpyF3I	CTNAG	1 cut(s)	509
HpySE526I	ACGT	2 cut(s)	494, 1497
Hsp92II	CATG	9 cut(s)	87, 562, 864, 1036, 1102, 1232, 1634, 1708, 1899
HspAI	GCGC	1 cut(s)	1749
KroI	GCCGGC	1 cut(s)	1453
KroNI	GCCGGC	1 cut(s)	1455
Ksp22I	TGATCA	3 cut(s)	426, 1051, 1729
Kzo9I	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
LguI	GCTCTTC	2 cut(s)	528, 1005
LmnI	GCTCC	3 cut(s)	40, 115, 1682
Lsp1109I	GCAGC	5 cut(s)	158, 576, 852, 869, 958
LweI	GCATC	7 cut(s)	307, 479, 529, 1036, 1092, 1162, 1440
MaeI	CTAG	3 cut(s)	753, 765, 1424
MaeII	ACGT	2 cut(s)	494, 1497
MaeIII	GTNAC	5 cut(s)	379, 438, 709, 1293, 1801
MalI	GATC	8 cut(s)	76, 165, 428, 458, 462, 699, 1053, 1731
MbiI	CCGCTC	1 cut(s)	1821
MboI	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
MhlI	GDGCHC	3 cut(s)	582, 1188, 1687
MlsI	TGGCCA	3 cut(s)	673, 686, 732
MluCI	AATT	8 cut(s)	44, 115, 260, 714, 1503, 1534, 1672, 1690
MluNI	TGGCCA	3 cut(s)	673, 686, 732
MlyI	GAGTC	7 cut(s)	514, 834, 1158, 1205, 1258, 1357, 1798
MmeI	TCCRAC	4 cut(s)	247, 1254, 1422, 1553
Mox20I	TGGCCA	3 cut(s)	673, 686, 732
Mph1103I	ATGCAT	1 cut(s)	556
MroNI	GCCGGC	1 cut(s)	1453
MroXI	GAANNNNTTC	3 cut(s)	23, 1028, 1200
MscI	TGGCCA	3 cut(s)	673, 686, 732
MseI	TTAA	6 cut(s)	540, 629, 833, 1155, 1358, 1689
MslI	CAYNNNNRTG	2 cut(s)	250, 1031
Msp20I	TGGCCA	3 cut(s)	673, 686, 732
MspCI	CTTAAG	1 cut(s)	539
MspI	CCGG	6 cut(s)	54, 59, 72, 186, 1454, 1826
MspR9I	CCNGG	8 cut(s)	38, 60, 72, 169, 186, 187, 729, 734
Mva1269I	GAATGC	2 cut(s)	554, 1718
MvaI	CCWGG	4 cut(s)	38, 169, 729, 734
MvnI	CGCG	1 cut(s)	1209
MwoI	GCNNNNNNNGC	5 cut(s)	146, 586, 1046, 1715, 1763
NaeI	GCCGGC	1 cut(s)	1455
NciI	CCSGG	4 cut(s)	60, 72, 186, 187
NcoI	CCATGG	1 cut(s)	1704
NdeI	CATATG	2 cut(s)	297, 385
NdeII	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
NgoMIV	GCCGGC	1 cut(s)	1453
NheI	GCTAGC	1 cut(s)	764
NlaIII	CATG	9 cut(s)	87, 562, 864, 1036, 1102, 1232, 1634, 1708, 1899
NlaIV	GGNNCC	3 cut(s)	52, 70, 357
NmuCI	GTSAC	4 cut(s)	379, 438, 1293, 1801
NsbI	TGCGCA	1 cut(s)	1750
NsiI	ATGCAT	1 cut(s)	556
NspI	RCATGY	3 cut(s)	87, 864, 1102
PaeR7I	CTCGAG	1 cut(s)	337
PagI	TCATGA	1 cut(s)	558
PciI	ACATGT	1 cut(s)	83
PciSI	GCTCTTC	2 cut(s)	528, 1005
PctI	GAATGC	2 cut(s)	554, 1718
PdiI	GCCGGC	1 cut(s)	1455
PdmI	GAANNNNTTC	3 cut(s)	23, 1028, 1200
PfeI	GAWTC	3 cut(s)	33, 1073, 1579
PflFI	GACNNNGTC	1 cut(s)	906
PfoI	TCCNGGA	2 cut(s)	36, 70
PkrI	GCNGC	5 cut(s)	148, 591, 842, 859, 948
Ple19I	CGATCG	1 cut(s)	463
PleI	GAGTC	7 cut(s)	513, 833, 1158, 1205, 1257, 1357, 1798
PpsI	GAGTC	7 cut(s)	513, 833, 1158, 1205, 1257, 1357, 1798
PscI	ACATGT	1 cut(s)	83
Psp124BI	GAGCTC	1 cut(s)	1687
Psp6I	CCWGG	4 cut(s)	36, 167, 727, 732
PspFI	CCCAGC	1 cut(s)	1714
PspGI	CCWGG	4 cut(s)	36, 167, 727, 732
PspN4I	GGNNCC	3 cut(s)	52, 70, 357
PspPI	GGNCC	6 cut(s)	51, 56, 68, 159, 611, 1427
PstI	CTGCAG	2 cut(s)	594, 1395
PsyI	GACNNNGTC	1 cut(s)	906
PvuI	CGATCG	1 cut(s)	463
RsaI	GTAC	2 cut(s)	757, 1865
RsaNI	GTAC	2 cut(s)	756, 1864
RseI	CAYNNNNRTG	2 cut(s)	250, 1031
Rsr2I	CGGWCCG	1 cut(s)	56
RsrII	CGGWCCG	1 cut(s)	56
SacI	GAGCTC	1 cut(s)	1687
SapI	GCTCTTC	2 cut(s)	528, 1005
SaqAI	TTAA	6 cut(s)	540, 629, 833, 1155, 1358, 1689
SatI	GCNGC	5 cut(s)	147, 590, 841, 858, 947
Sau3AI	GATC	8 cut(s)	74, 163, 426, 456, 460, 697, 1051, 1729
Sau96I	GGNCC	6 cut(s)	51, 56, 68, 159, 611, 1427
SchI	GAGTC	7 cut(s)	514, 834, 1158, 1205, 1258, 1357, 1798
ScrFI	CCNGG	8 cut(s)	38, 60, 72, 169, 186, 187, 729, 734
SduI	GDGCHC	3 cut(s)	582, 1188, 1687
SfaNI	GCATC	7 cut(s)	307, 479, 529, 1036, 1092, 1162, 1440
SfcI	CTRYAG	3 cut(s)	590, 925, 1391
Sfr274I	CTCGAG	1 cut(s)	337
SgrAI	CRCCGGYG	1 cut(s)	1825
SinI	GGWCC	5 cut(s)	51, 56, 68, 159, 611
SlaI	CTCGAG	1 cut(s)	337
SmaI	CCCGGG	1 cut(s)	187
SmiMI	CAYNNNNRTG	2 cut(s)	250, 1031
SmlI	CTYRAG	3 cut(s)	337, 539, 1016
SmoI	CTYRAG	3 cut(s)	337, 539, 1016
Sse9I	AATT	8 cut(s)	44, 115, 260, 714, 1503, 1534, 1672, 1690
SsiI	CCGC	3 cut(s)	609, 978, 1819
SspMI	CTAG	3 cut(s)	753, 765, 1424
SstI	GAGCTC	1 cut(s)	1687
StyD4I	CCNGG	8 cut(s)	36, 58, 70, 167, 184, 185, 727, 732
StyI	CCWWGG	2 cut(s)	1423, 1704
TaaI	ACNGT	9 cut(s)	334, 349, 645, 658, 795, 881, 926, 1345, 1652
TaiI	ACGT	2 cut(s)	497, 1500
TaqI	TCGA	7 cut(s)	27, 338, 413, 444, 459, 910, 1247
TaqII	GACCGA	4 cut(s)	176, 294, 1130, 1281
TasI	AATT	8 cut(s)	44, 115, 260, 714, 1503, 1534, 1672, 1690
TatI	WGTACW	1 cut(s)	755
TfiI	GAWTC	3 cut(s)	33, 1073, 1579
Tru1I	TTAA	6 cut(s)	540, 629, 833, 1155, 1358, 1689
Tru9I	TTAA	6 cut(s)	540, 629, 833, 1155, 1358, 1689
TscAI	CASTG	6 cut(s)	674, 857, 886, 1302, 1650, 1732
TseFI	GTSAC	4 cut(s)	379, 438, 1293, 1801
TseI	GCWGC	5 cut(s)	146, 589, 840, 857, 946
Tsp45I	GTSAC	4 cut(s)	379, 438, 1293, 1801
TspDTI	ATGAA	8 cut(s)	107, 284, 402, 547, 575, 1021, 1037, 1209
TspGWI	ACGGA	1 cut(s)	240
TspMI	CCCGGG	1 cut(s)	185
TspRI	CASTG	6 cut(s)	674, 857, 886, 1302, 1650, 1732
Tth111I	GACNNNGTC	1 cut(s)	906
Vha464I	CTTAAG	1 cut(s)	539
VneI	GTGCAC	1 cut(s)	578
VpaK11BI	GGWCC	5 cut(s)	51, 56, 68, 159, 611
XagI	CCTNNNNNAGG	3 cut(s)	172, 415, 1155
XapI	RAATTY	2 cut(s)	115, 1534
XceI	RCATGY	3 cut(s)	87, 864, 1102
XcmI	CCANNNNNNNNNTGG	1 cut(s)	44
XhoI	CTCGAG	1 cut(s)	337
XmaI	CCCGGG	1 cut(s)	185
XmaJI	CCTAGG	1 cut(s)	1423
XmiI	GTMKAC	2 cut(s)	828, 921
XmnI	GAANNNNTTC	3 cut(s)	23, 1028, 1200
XspI	CTAG	3 cut(s)	753, 765, 1424
Zsp2I	ATGCAT	1 cut(s)	556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.