Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0029395

Physical Location & Seq

Genomic Coordinates Forward (+)

2277406 .. 2278536

Gene Structure 1131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g03690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 552 bp

ATGGGTTTGGTGCTTAATCCTAGCAAGGTGGAGAGTTGGGGTAAAAGTAGCAAATCGAAGGGTAGGAAGAAGAAAGATAAGACGGTGGAGGAACCTGGGTGTTGGGTTAAGCTCAGGTTTGGGACCTGCATGCCTTCGAGATCCAAAGTTAATAGCTCCATCACTGGAACTAGTGTTTCTTATGCAGAAACTAAATCTTCGAATGAGAAAAGTAGAGATCGAGAAATTACTCGTGGAGGGTCATCCACCACTACTAGTAATGCTGGCAGTTCTACGTCCACGCCCTATTTTAGTGAGGAACTGAAGGTTGCTTCGCAGCTCCGGAAATTCACATTTAACGAACTTAAGTTAGCGACGAGGAACTTCAGACCTGAGAGTCTTCTTGGTGAGGGTGGATTTGGTTGTGTATTTAAAGGTTGGGTCGAGGAGAATGGAACTGCCCCTGTTAAACCTGGTACCGGGCTTACGGTTGCAGTTAAGACTCTCAACCACGATGGACTTCAGGGTCACAAAGAATGGCTTGCTGAAATTTATTTTCTTGGTGATCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

184

Amino Acids

19.99

Weight (kDa)

9.63

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029395)

Species	Orthologous Gene IDs
pyrus_communis	pycom111g03690
rosa_samantha	Rh2DG632900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	375, 504
Acc36I	ACCTGC	1 cut(s)	134
Acc65I	GGTACC	1 cut(s)	455
AccB1I	GGYRCC	1 cut(s)	455
AccIII	TCCGGA	1 cut(s)	321
AclWI	GGATC	1 cut(s)	135
AcsI	RAATTY	2 cut(s)	326, 528
AcuI	CTGAAG	3 cut(s)	323, 349, 485
AfaI	GTAC	1 cut(s)	457
AfiI	CCNNNNNNNGG	1 cut(s)	458
AflII	CTTAAG	1 cut(s)	344
AhlI	ACTAGT	2 cut(s)	170, 254
AjnI	CCWGG	2 cut(s)	94, 451
AluBI	AGCT	3 cut(s)	112, 156, 319
AluI	AGCT	3 cut(s)	112, 156, 319
AlwI	GGATC	1 cut(s)	135
Aor13HI	TCCGGA	1 cut(s)	321
ApeKI	GCWGC	1 cut(s)	316
ApoI	RAATTY	2 cut(s)	326, 528
Asp718I	GGTACC	1 cut(s)	455
AspS9I	GGNCC	1 cut(s)	123
AsuC2I	CCSGG	1 cut(s)	460
AsuHPI	GGTGA	1 cut(s)	398
AsuII	TTCGAA	1 cut(s)	200
AvaII	GGWCC	1 cut(s)	123
BanI	GGYRCC	1 cut(s)	455
BauI	CACGAG	1 cut(s)	231
BbsI	GAAGAC	1 cut(s)	371
BbvI	GCAGC	1 cut(s)	328
BccI	CCATC	2 cut(s)	167, 488
BciT130I	CCWGG	2 cut(s)	96, 453
BcnI	CCSGG	1 cut(s)	460
BcuI	ACTAGT	2 cut(s)	170, 254
BfaI	CTAG	3 cut(s)	21, 171, 255
BfrI	CTTAAG	1 cut(s)	344
BfuAI	ACCTGC	1 cut(s)	134
BisI	GCNGC	1 cut(s)	317
BlsI	GCNGC	1 cut(s)	318
Bme1390I	CCNGG	3 cut(s)	96, 453, 460
Bme18I	GGWCC	1 cut(s)	123
BmgT120I	GGNCC	1 cut(s)	123
BmiI	GGNNCC	3 cut(s)	93, 124, 457
BmrFI	CCNGG	3 cut(s)	96, 453, 460
BpiI	GAAGAC	1 cut(s)	371
Bpu10I	CCTNAGC	1 cut(s)	113
Bpu14I	TTCGAA	1 cut(s)	200
BpuMI	CCSGG	1 cut(s)	460
Bsa29I	ATCGAT	1 cut(s)	547
BsaJI	CCNNGG	1 cut(s)	95
BsaWI	WCCGGW	1 cut(s)	321
Bsc4I	CCNNNNNNNGG	1 cut(s)	458
Bse1I	ACTGG	1 cut(s)	169
BseAI	TCCGGA	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	96, 453
BseCI	ATCGAT	1 cut(s)	547
BseDI	CCNNGG	1 cut(s)	95
BseGI	GGATG	1 cut(s)	242
BseLI	CCNNNNNNNGG	1 cut(s)	458
BseMII	CTCAG	2 cut(s)	127, 363
BseNI	ACTGG	1 cut(s)	169
BseRI	GAGGAG	1 cut(s)	440
BseXI	GCAGC	1 cut(s)	328
BshNI	GGYRCC	1 cut(s)	455
BshVI	ATCGAT	1 cut(s)	547
BsiSI	CCGG	2 cut(s)	322, 459
BslFI	GGGAC	1 cut(s)	136
BslI	CCNNNNNNNGG	1 cut(s)	458
BsmFI	GGGAC	1 cut(s)	136
Bsp119I	TTCGAA	1 cut(s)	200
Bsp13I	TCCGGA	1 cut(s)	321
Bsp143I	GATC	3 cut(s)	140, 217, 544
BspCNI	CTCAG	2 cut(s)	126, 364
BspDI	ATCGAT	1 cut(s)	547
BspEI	TCCGGA	1 cut(s)	321
BspLI	GGNNCC	3 cut(s)	93, 124, 457
BspMI	ACCTGC	1 cut(s)	134
BspPI	GGATC	1 cut(s)	135
BspT104I	TTCGAA	1 cut(s)	200
BspT107I	GGYRCC	1 cut(s)	455
BspTI	CTTAAG	1 cut(s)	344
BsrI	ACTGG	1 cut(s)	169
BssECI	CCNNGG	1 cut(s)	95
BssMI	GATC	3 cut(s)	140, 217, 544
BssSI	CACGAG	1 cut(s)	231
Bst2BI	CACGAG	1 cut(s)	231
Bst2UI	CCWGG	2 cut(s)	96, 453
Bst4CI	ACNGT	2 cut(s)	85, 469
BstAFI	CTTAAG	1 cut(s)	344
BstBI	TTCGAA	1 cut(s)	200
BstC8I	GCNNGC	3 cut(s)	131, 265, 522
BstDEI	CTNAG	2 cut(s)	113, 372
BstF5I	GGATG	1 cut(s)	242
BstKTI	GATC	3 cut(s)	143, 220, 547
BstMBI	GATC	3 cut(s)	140, 217, 544
BstNI	CCWGG	2 cut(s)	96, 453
BstNSI	RCATGY	1 cut(s)	133
BstSCI	CCNGG	3 cut(s)	94, 451, 458
BstV1I	GCAGC	1 cut(s)	328
BstV2I	GAAGAC	1 cut(s)	371
BstX2I	RGATCY	1 cut(s)	140
BstYI	RGATCY	1 cut(s)	140
Bsu15I	ATCGAT	1 cut(s)	547
BsuTUI	ATCGAT	1 cut(s)	547
BtsCI	GGATG	1 cut(s)	242
BtsIMutI	CAGTG	1 cut(s)	162
BveI	ACCTGC	1 cut(s)	134
Cac8I	GCNNGC	3 cut(s)	131, 265, 522
Cfr13I	GGNCC	1 cut(s)	123
ClaI	ATCGAT	1 cut(s)	547
CsiI	ACCWGGT	1 cut(s)	451
Csp6I	GTAC	1 cut(s)	456
CviAII	CATG	1 cut(s)	130
CviJI	RGCY	5 cut(s)	112, 156, 319, 463, 520
CviKI_1	RGCY	5 cut(s)	112, 156, 319, 463, 520
CviQI	GTAC	1 cut(s)	456
DdeI	CTNAG	2 cut(s)	113, 372
DpnI	GATC	3 cut(s)	142, 219, 546
DpnII	GATC	3 cut(s)	140, 217, 544
DraI	TTTAAA	1 cut(s)	412
DrdI	GACNNNNNNGTC	2 cut(s)	375, 504
DseDI	GACNNNNNNGTC	2 cut(s)	375, 504
Eco47I	GGWCC	1 cut(s)	123
Eco57I	CTGAAG	3 cut(s)	323, 349, 485
EcoO109I	RGGNCCY	1 cut(s)	123
EcoRII	CCWGG	2 cut(s)	94, 451
FaeI	CATG	1 cut(s)	133
FaiI	YATR	2 cut(s)	131, 183
FalI	AAGNNNNNCTT	2 cut(s)	504, 536
FaqI	GGGAC	1 cut(s)	136
FatI	CATG	1 cut(s)	129
Fnu4HI	GCNGC	1 cut(s)	317
FokI	GGATG	1 cut(s)	229
Fsp4HI	GCNGC	1 cut(s)	317
FspBI	CTAG	3 cut(s)	21, 171, 255
GluI	GCNGC	1 cut(s)	317
HapII	CCGG	2 cut(s)	322, 459
Hin1II	CATG	1 cut(s)	133
HinfI	GANTC	2 cut(s)	376, 481
HpaII	CCGG	2 cut(s)	322, 459
HphI	GGTGA	1 cut(s)	398
Hpy166II	GTNNAC	1 cut(s)	279
Hpy188I	TCNGA	1 cut(s)	368
Hpy188III	TCNNGA	3 cut(s)	138, 221, 322
Hpy8I	GTNNAC	1 cut(s)	279
Hpy99I	CGWCG	1 cut(s)	358
HpyAV	CCTTC	3 cut(s)	52, 144, 298
HpyCH4III	ACNGT	2 cut(s)	85, 469
HpyCH4IV	ACGT	1 cut(s)	275
HpyCH4V	TGCA	3 cut(s)	129, 185, 473
HpyF3I	CTNAG	2 cut(s)	113, 372
HpySE526I	ACGT	1 cut(s)	275
Hsp92II	CATG	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	321
KpnI	GGTACC	1 cut(s)	459
Kzo9I	GATC	3 cut(s)	140, 217, 544
LmnI	GCTCC	2 cut(s)	161, 324
Lsp1109I	GCAGC	1 cut(s)	328
MabI	ACCWGGT	1 cut(s)	451
MaeI	CTAG	3 cut(s)	21, 171, 255
MaeII	ACGT	1 cut(s)	275
MaeIII	GTNAC	1 cut(s)	506
MalI	GATC	3 cut(s)	142, 219, 546
MboI	GATC	3 cut(s)	140, 217, 544
MboII	GAAGA	4 cut(s)	79, 82, 189, 371
MflI	RGATCY	1 cut(s)	140
MluCI	AATT	3 cut(s)	225, 326, 528
MlyI	GAGTC	2 cut(s)	385, 475
MnlI	CCTC	6 cut(s)	82, 230, 289, 351, 382, 418
MroI	TCCGGA	1 cut(s)	321
MseI	TTAA	8 cut(s)	15, 108, 150, 336, 345, 411, 447, 477
MspCI	CTTAAG	1 cut(s)	344
MspI	CCGG	2 cut(s)	322, 459
MspR9I	CCNGG	3 cut(s)	96, 453, 460
MvaI	CCWGG	2 cut(s)	96, 453
NciI	CCSGG	1 cut(s)	460
NdeII	GATC	3 cut(s)	140, 217, 544
NlaIII	CATG	1 cut(s)	133
NlaIV	GGNNCC	3 cut(s)	93, 124, 457
NmuCI	GTSAC	1 cut(s)	506
NspI	RCATGY	1 cut(s)	133
NspV	TTCGAA	1 cut(s)	200
PaeI	GCATGC	1 cut(s)	133
PkrI	GCNGC	1 cut(s)	318
PleI	GAGTC	2 cut(s)	384, 475
PpsI	GAGTC	2 cut(s)	384, 475
PpuMI	RGGWCCY	1 cut(s)	123
Psp5II	RGGWCCY	1 cut(s)	123
Psp6I	CCWGG	2 cut(s)	94, 451
PspGI	CCWGG	2 cut(s)	94, 451
PspN4I	GGNNCC	3 cut(s)	93, 124, 457
PspPI	GGNCC	1 cut(s)	123
PspPPI	RGGWCCY	1 cut(s)	123
PsuI	RGATCY	1 cut(s)	140
RsaI	GTAC	1 cut(s)	457
RsaNI	GTAC	1 cut(s)	456
SaqAI	TTAA	8 cut(s)	15, 108, 150, 336, 345, 411, 447, 477
SatI	GCNGC	1 cut(s)	317
Sau3AI	GATC	3 cut(s)	140, 217, 544
Sau96I	GGNCC	1 cut(s)	123
SchI	GAGTC	2 cut(s)	385, 475
ScrFI	CCNGG	3 cut(s)	96, 453, 460
SexAI	ACCWGGT	1 cut(s)	451
SfuI	TTCGAA	1 cut(s)	200
SinI	GGWCC	1 cut(s)	123
SmlI	CTYRAG	1 cut(s)	344
SmoI	CTYRAG	1 cut(s)	344
SpeI	ACTAGT	2 cut(s)	170, 254
SphI	GCATGC	1 cut(s)	133
Sse9I	AATT	3 cut(s)	225, 326, 528
SspMI	CTAG	3 cut(s)	21, 171, 255
StyD4I	CCNGG	3 cut(s)	94, 451, 458
TaaI	ACNGT	2 cut(s)	85, 469
TaiI	ACGT	1 cut(s)	278
TaqI	TCGA	6 cut(s)	56, 137, 200, 220, 423, 547
TasI	AATT	3 cut(s)	225, 326, 528
Tru1I	TTAA	8 cut(s)	15, 108, 150, 336, 345, 411, 447, 477
Tru9I	TTAA	8 cut(s)	15, 108, 150, 336, 345, 411, 447, 477
TscAI	CASTG	1 cut(s)	169
TseFI	GTSAC	1 cut(s)	506
TseI	GCWGC	1 cut(s)	316
Tsp45I	GTSAC	1 cut(s)	506
TspRI	CASTG	1 cut(s)	169
Vha464I	CTTAAG	1 cut(s)	344
VpaK11BI	GGWCC	1 cut(s)	123
XapI	RAATTY	2 cut(s)	326, 528
XceI	RCATGY	1 cut(s)	133
XspI	CTAG	3 cut(s)	21, 171, 255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.