pycom11g13760

Protein of unknown function (DUF1749)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0029404
Physical Location & Seq
Forward (+)
13497606 .. 13499578
1973 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g13760.3

Sequence Viewer

Length: 294 bp
ATGAGTTTGACTTGCAGCCATGTCAATCTGCTGTGGGATTCCTATCTATGTTTCAGAGTTGCAACATGGTTGAACAATGGACTGGATTCGAATTTCTGCAGAAAGCGCTTTTTGTATTTAACTTTTCCAAAGCCGGCAACAATTGAACTAAACTTCTGCTGCCTTTCAAATTTCTTTAATTCTAAAGGAGCCCTTTTCGTCATGGCAAGGTTGTTCGATGTATGGGGAAGGCGGGGGTTCGTGAGACGGGTGCCTCCTCTTCCAGATCGTCCACATAAGAGGTCAATTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1749

Protein Analysis

98

Amino Acids

11.39

Weight (kDa)

10.08

Isoelectric Point (pI)

55.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029404)

Species Orthologous Gene IDs
pyrus_communis pycom11g13760 pycom15g38650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 250
AciI CCGC 1 cut(s) 232
AcsI RAATTY 2 cut(s) 91, 169
AfeI AGCGCT 1 cut(s) 107
AgsI TTSAA 3 cut(s) 73, 146, 168
Alw26I GTCTC 1 cut(s) 238
Aor51HI AGCGCT 1 cut(s) 107
ApeKI GCWGC 2 cut(s) 15, 159
ApoI RAATTY 2 cut(s) 91, 169
AspLEI GCGC 1 cut(s) 108
AsuII TTCGAA 1 cut(s) 89
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 193
BbvI GCAGC 2 cut(s) 27, 146
BcoDI GTCTC 1 cut(s) 238
BfmI CTRYAG 1 cut(s) 97
BfoI RGCGCY 1 cut(s) 109
BisI GCNGC 2 cut(s) 16, 160
BlsI GCNGC 2 cut(s) 17, 161
BmiI GGNNCC 2 cut(s) 190, 252
Bpu14I TTCGAA 1 cut(s) 89
BsaBI GATNNNNATC 1 cut(s) 42
Bse118I RCCGGY 1 cut(s) 133
Bse1I ACTGG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 42
BseJI GATNNNNATC 1 cut(s) 42
BseNI ACTGG 1 cut(s) 87
BseRI GAGGAG 1 cut(s) 246
BseXI GCAGC 2 cut(s) 27, 146
BshNI GGYRCC 1 cut(s) 250
BsiSI CCGG 1 cut(s) 134
BsmAI GTCTC 1 cut(s) 238
BsmBI CGTCTC 1 cut(s) 238
Bsp119I TTCGAA 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 193
Bsp143I GATC 1 cut(s) 265
BspACI CCGC 1 cut(s) 232
BspLI GGNNCC 2 cut(s) 190, 252
BspMAI CTGCAG 1 cut(s) 101
BspT104I TTCGAA 1 cut(s) 89
BspT107I GGYRCC 1 cut(s) 250
BsrFI RCCGGY 1 cut(s) 133
BsrI ACTGG 1 cut(s) 87
BssAI RCCGGY 1 cut(s) 133
BssMI GATC 1 cut(s) 265
Bst6I CTCTTC 1 cut(s) 264
BstBI TTCGAA 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 135
BstH2I RGCGCY 1 cut(s) 109
BstHHI GCGC 1 cut(s) 108
BstKTI GATC 1 cut(s) 268
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 1 cut(s) 265
BstMWI GCNNNNNNNGC 1 cut(s) 105
BstSFI CTRYAG 1 cut(s) 97
BstV1I GCAGC 2 cut(s) 27, 146
Cac8I GCNNGC 1 cut(s) 135
CfoI GCGC 1 cut(s) 108
Cfr10I RCCGGY 1 cut(s) 133
CviAII CATG 3 cut(s) 20, 66, 202
CviJI RGCY 3 cut(s) 18, 133, 191
CviKI_1 RGCY 3 cut(s) 18, 133, 191
DpnI GATC 1 cut(s) 267
DpnII GATC 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
Eco24I GRGCYC 1 cut(s) 193
Eco47III AGCGCT 1 cut(s) 107
EcoT38I GRGCYC 1 cut(s) 193
Esp3I CGTCTC 1 cut(s) 238
FaeI CATG 3 cut(s) 23, 69, 205
FaiI YATR 6 cut(s) 21, 49, 67, 203, 223, 276
FalI AAGNNNNNCTT 2 cut(s) 177, 209
FatI CATG 3 cut(s) 19, 65, 201
FauI CCCGC 1 cut(s) 225
Fnu4HI GCNGC 2 cut(s) 16, 160
FriOI GRGCYC 1 cut(s) 193
Fsp4HI GCNGC 2 cut(s) 16, 160
GlaI GCGC 1 cut(s) 107
GluI GCNGC 2 cut(s) 16, 160
HaeII RGCGCY 1 cut(s) 109
HapII CCGG 1 cut(s) 134
HhaI GCGC 1 cut(s) 108
Hin1II CATG 3 cut(s) 23, 69, 205
Hin6I GCGC 1 cut(s) 106
HinP1I GCGC 1 cut(s) 106
HinfI GANTC 2 cut(s) 38, 86
HpaII CCGG 1 cut(s) 134
Hpy166II GTNNAC 1 cut(s) 272
Hpy188I TCNGA 1 cut(s) 56
Hpy188III TCNNGA 2 cut(s) 241, 263
Hpy8I GTNNAC 1 cut(s) 272
HpyAV CCTTC 1 cut(s) 222
HpyCH4V TGCA 3 cut(s) 15, 62, 99
HpyF10VI GCNNNNNNNGC 1 cut(s) 105
Hsp92II CATG 3 cut(s) 23, 69, 205
HspAI GCGC 1 cut(s) 106
KroI GCCGGC 1 cut(s) 133
KroNI GCCGGC 1 cut(s) 135
Kzo9I GATC 1 cut(s) 265
LmnI GCTCC 1 cut(s) 188
LpnPI CCDG 3 cut(s) 68, 147, 276
Lsp1109I GCAGC 2 cut(s) 27, 146
MalI GATC 1 cut(s) 267
MboI GATC 1 cut(s) 265
MboII GAAGA 1 cut(s) 251
MfeI CAATTG 1 cut(s) 141
MhlI GDGCHC 1 cut(s) 193
MluCI AATT 5 cut(s) 91, 141, 169, 178, 285
MnlI CCTC 3 cut(s) 264, 267, 273
MroNI GCCGGC 1 cut(s) 133
MseI TTAA 2 cut(s) 119, 177
MspI CCGG 1 cut(s) 134
MunI CAATTG 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 105
NaeI GCCGGC 1 cut(s) 135
NdeII GATC 1 cut(s) 265
NgoMIV GCCGGC 1 cut(s) 133
NlaIII CATG 3 cut(s) 23, 69, 205
NlaIV GGNNCC 2 cut(s) 190, 252
NspV TTCGAA 1 cut(s) 89
PdiI GCCGGC 1 cut(s) 135
PfeI GAWTC 2 cut(s) 38, 86
PkrI GCNGC 2 cut(s) 17, 161
PspN4I GGNNCC 2 cut(s) 190, 252
PstI CTGCAG 1 cut(s) 101
SaqAI TTAA 2 cut(s) 119, 177
SatI GCNGC 2 cut(s) 16, 160
Sau3AI GATC 1 cut(s) 265
SduI GDGCHC 1 cut(s) 193
SetI ASST 2 cut(s) 212, 284
SfcI CTRYAG 1 cut(s) 97
SfuI TTCGAA 1 cut(s) 89
Sse9I AATT 5 cut(s) 91, 141, 169, 178, 285
SsiI CCGC 1 cut(s) 232
TaqI TCGA 2 cut(s) 89, 216
TasI AATT 5 cut(s) 91, 141, 169, 178, 285
TfiI GAWTC 2 cut(s) 38, 86
Tru1I TTAA 2 cut(s) 119, 177
Tru9I TTAA 2 cut(s) 119, 177
TseI GCWGC 2 cut(s) 15, 159
XapI RAATTY 2 cut(s) 91, 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.