pycom15g38650

3,4-dihydroxy-2-butanone kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
38410259 .. 38411334
1076 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38650.3

Sequence Viewer

Length: 264 bp
ATGTTGCAGGTTAAGGTTGTGTTGCGTGCTGATGTTTCCGGTGGGACGTATGACAAAGTTGCGATTATATCAGGCCTCCATGTCAATCTGTTGTGGGATTCCTATCTATGTTTTGGAGTTGCAACATGGTTGAACAACGGACCGGATTCGAACTTCTGCAGAAAGCGCTTTCTGTATTTAACTTTTCCGAAGCCGGCAACAATTGAACTAAACTTCTGCTGCCTTTCAAATTTCTTTAATTCTAAAGGAGGTACTTTTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.76

Weight (kDa)

8.8

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029404)

Species Orthologous Gene IDs
pyrus_communis pycom11g13760 pycom15g38650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 229
AfaI GTAC 1 cut(s) 253
AfeI AGCGCT 1 cut(s) 167
AgsI TTSAA 3 cut(s) 133, 206, 228
Aor51HI AGCGCT 1 cut(s) 167
AoxI GGCC 1 cut(s) 73
ApeKI GCWGC 1 cut(s) 219
ApoI RAATTY 1 cut(s) 229
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 1 cut(s) 140
AsuII TTCGAA 1 cut(s) 149
AvaII GGWCC 1 cut(s) 140
BbvI GCAGC 1 cut(s) 206
BfmI CTRYAG 1 cut(s) 157
BfoI RGCGCY 1 cut(s) 169
BisI GCNGC 1 cut(s) 220
BlsI GCNGC 1 cut(s) 221
Bme18I GGWCC 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 140
Bpu14I TTCGAA 1 cut(s) 149
BsaBI GATNNNNATC 1 cut(s) 102
BsaWI WCCGGW 2 cut(s) 38, 142
Bse118I RCCGGY 1 cut(s) 193
Bse8I GATNNNNATC 1 cut(s) 102
BseJI GATNNNNATC 1 cut(s) 102
BseXI GCAGC 1 cut(s) 206
BshFI GGCC 1 cut(s) 75
BsiSI CCGG 3 cut(s) 39, 143, 194
BslFI GGGAC 1 cut(s) 58
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 1 cut(s) 75
Bsp119I TTCGAA 1 cut(s) 149
BspANI GGCC 1 cut(s) 75
BspMAI CTGCAG 1 cut(s) 161
BspT104I TTCGAA 1 cut(s) 149
BsrFI RCCGGY 1 cut(s) 193
BssAI RCCGGY 1 cut(s) 193
BstBI TTCGAA 1 cut(s) 149
BstC8I GCNNGC 2 cut(s) 27, 195
BstH2I RGCGCY 1 cut(s) 169
BstHHI GCGC 1 cut(s) 168
BstMWI GCNNNNNNNGC 1 cut(s) 165
BstSFI CTRYAG 1 cut(s) 157
BstV1I GCAGC 1 cut(s) 206
BsuRI GGCC 1 cut(s) 75
Cac8I GCNNGC 2 cut(s) 27, 195
CfoI GCGC 1 cut(s) 168
Cfr10I RCCGGY 1 cut(s) 193
Cfr13I GGNCC 1 cut(s) 140
CpoI CGGWCCG 1 cut(s) 140
Csp6I GTAC 1 cut(s) 252
CspI CGGWCCG 1 cut(s) 140
CviAII CATG 2 cut(s) 80, 126
CviJI RGCY 2 cut(s) 75, 193
CviKI_1 RGCY 2 cut(s) 75, 193
CviQI GTAC 1 cut(s) 252
Eco147I AGGCCT 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 140
Eco47III AGCGCT 1 cut(s) 167
FaeI CATG 2 cut(s) 83, 129
FaiI YATR 6 cut(s) 51, 68, 81, 109, 127, 262
FaqI GGGAC 1 cut(s) 58
FatI CATG 2 cut(s) 79, 125
Fnu4HI GCNGC 1 cut(s) 220
Fsp4HI GCNGC 1 cut(s) 220
GlaI GCGC 1 cut(s) 167
GluI GCNGC 1 cut(s) 220
HaeII RGCGCY 1 cut(s) 169
HaeIII GGCC 1 cut(s) 75
HapII CCGG 3 cut(s) 39, 143, 194
HhaI GCGC 1 cut(s) 168
Hin1II CATG 2 cut(s) 83, 129
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HinfI GANTC 2 cut(s) 98, 146
HpaII CCGG 3 cut(s) 39, 143, 194
Hpy188I TCNGA 1 cut(s) 189
HpyCH4IV ACGT 1 cut(s) 47
HpyCH4V TGCA 3 cut(s) 7, 122, 159
HpyF10VI GCNNNNNNNGC 1 cut(s) 165
HpySE526I ACGT 1 cut(s) 47
Hsp92II CATG 2 cut(s) 83, 129
HspAI GCGC 1 cut(s) 166
KroI GCCGGC 1 cut(s) 193
KroNI GCCGGC 1 cut(s) 195
LpnPI CCDG 4 cut(s) 52, 57, 156, 207
Lsp1109I GCAGC 1 cut(s) 206
MaeII ACGT 1 cut(s) 47
MfeI CAATTG 1 cut(s) 201
MluCI AATT 3 cut(s) 201, 229, 238
MnlI CCTC 2 cut(s) 86, 242
MroNI GCCGGC 1 cut(s) 193
MseI TTAA 3 cut(s) 12, 179, 237
MspI CCGG 3 cut(s) 39, 143, 194
MunI CAATTG 1 cut(s) 201
MwoI GCNNNNNNNGC 1 cut(s) 165
NaeI GCCGGC 1 cut(s) 195
NgoMIV GCCGGC 1 cut(s) 193
NlaIII CATG 2 cut(s) 83, 129
NspV TTCGAA 1 cut(s) 149
PceI AGGCCT 1 cut(s) 75
PdiI GCCGGC 1 cut(s) 195
PfeI GAWTC 2 cut(s) 98, 146
PkrI GCNGC 1 cut(s) 221
PspPI GGNCC 1 cut(s) 140
PstI CTGCAG 1 cut(s) 161
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
Rsr2I CGGWCCG 1 cut(s) 140
RsrII CGGWCCG 1 cut(s) 140
SaqAI TTAA 3 cut(s) 12, 179, 237
SatI GCNGC 1 cut(s) 220
Sau96I GGNCC 1 cut(s) 140
SetI ASST 4 cut(s) 12, 18, 50, 253
SfcI CTRYAG 1 cut(s) 157
SfuI TTCGAA 1 cut(s) 149
SgeI CNNG 8 cut(s) 20, 38, 51, 84, 92, 138, 155, 206
SinI GGWCC 1 cut(s) 140
Sse9I AATT 3 cut(s) 201, 229, 238
SseBI AGGCCT 1 cut(s) 75
StuI AGGCCT 1 cut(s) 75
TaiI ACGT 1 cut(s) 50
TaqI TCGA 1 cut(s) 149
TasI AATT 3 cut(s) 201, 229, 238
TfiI GAWTC 2 cut(s) 98, 146
Tru1I TTAA 3 cut(s) 12, 179, 237
Tru9I TTAA 3 cut(s) 12, 179, 237
TseI GCWGC 1 cut(s) 219
TspGWI ACGGA 1 cut(s) 153
VpaK11BI GGWCC 1 cut(s) 140
XapI RAATTY 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.