D-ala D-ala ligase N-terminus
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD11G1250900.v1.1 |
| pyrus_communis | pycom11g20320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 212 |
| AclWI | GGATC | 2 cut(s) | 12, 115 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AluBI | AGCT | 2 cut(s) | 180, 358 |
| AluI | AGCT | 2 cut(s) | 180, 358 |
| AlwI | GGATC | 2 cut(s) | 12, 115 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 183 |
| AoxI | GGCC | 3 cut(s) | 74, 137, 190 |
| AspS9I | GGNCC | 2 cut(s) | 138, 191 |
| AsuHPI | GGTGA | 5 cut(s) | 37, 42, 52, 71, 157 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BbsI | GAAGAC | 2 cut(s) | 378, 385 |
| BbvCI | CCTCAGC | 1 cut(s) | 176 |
| BccI | CCATC | 2 cut(s) | 17, 211 |
| BceAI | ACGGC | 3 cut(s) | 89, 152, 205 |
| BglII | AGATCT | 1 cut(s) | 307 |
| BmgT120I | GGNCC | 2 cut(s) | 138, 191 |
| BmiI | GGNNCC | 2 cut(s) | 6, 140 |
| BpiI | GAAGAC | 2 cut(s) | 378, 385 |
| Bpu10I | CCTNAGC | 1 cut(s) | 176 |
| BsaJI | CCNNGG | 1 cut(s) | 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseDI | CCNNGG | 1 cut(s) | 134 |
| BseGI | GGATG | 5 cut(s) | 9, 90, 113, 144, 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseMII | CTCAG | 1 cut(s) | 190 |
| BseRI | GAGGAG | 1 cut(s) | 310 |
| Bsh1236I | CGCG | 1 cut(s) | 212 |
| BshFI | GGCC | 3 cut(s) | 76, 139, 192 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsnI | GGCC | 3 cut(s) | 76, 139, 192 |
| Bsp143I | GATC | 3 cut(s) | 4, 120, 307 |
| Bsp68I | TCGCGA | 1 cut(s) | 212 |
| BspANI | GGCC | 3 cut(s) | 76, 139, 192 |
| BspCNI | CTCAG | 1 cut(s) | 189 |
| BspFNI | CGCG | 1 cut(s) | 212 |
| BspLI | GGNNCC | 2 cut(s) | 6, 140 |
| BspPI | GGATC | 2 cut(s) | 12, 115 |
| BssECI | CCNNGG | 1 cut(s) | 134 |
| BssMI | GATC | 3 cut(s) | 4, 120, 307 |
| Bst4CI | ACNGT | 3 cut(s) | 292, 365, 384 |
| BstDEI | CTNAG | 1 cut(s) | 176 |
| BstDSI | CCRYGG | 1 cut(s) | 134 |
| BstF5I | GGATG | 5 cut(s) | 9, 90, 113, 144, 199 |
| BstFNI | CGCG | 1 cut(s) | 212 |
| BstKTI | GATC | 3 cut(s) | 7, 123, 310 |
| BstMBI | GATC | 3 cut(s) | 4, 120, 307 |
| BstUI | CGCG | 1 cut(s) | 212 |
| BstV2I | GAAGAC | 2 cut(s) | 378, 385 |
| BstX2I | RGATCY | 3 cut(s) | 4, 120, 307 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 336 |
| BstYI | RGATCY | 3 cut(s) | 4, 120, 307 |
| BsuRI | GGCC | 3 cut(s) | 76, 139, 192 |
| BtgI | CCRYGG | 1 cut(s) | 134 |
| BtsCI | GGATG | 5 cut(s) | 9, 90, 113, 144, 199 |
| BtsIMutI | CAGTG | 2 cut(s) | 288, 361 |
| BtuMI | TCGCGA | 1 cut(s) | 212 |
| CaiI | CAGNNNCTG | 1 cut(s) | 183 |
| Cfr13I | GGNCC | 2 cut(s) | 138, 191 |
| CviAII | CATG | 1 cut(s) | 341 |
| CviJI | RGCY | 5 cut(s) | 76, 139, 180, 192, 358 |
| CviKI_1 | RGCY | 5 cut(s) | 76, 139, 180, 192, 358 |
| DdeI | CTNAG | 1 cut(s) | 176 |
| DpnI | GATC | 3 cut(s) | 6, 122, 309 |
| DpnII | GATC | 3 cut(s) | 4, 120, 307 |
| FaeI | CATG | 1 cut(s) | 344 |
| FaiI | YATR | 3 cut(s) | 171, 337, 342 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 370, 402 |
| FatI | CATG | 1 cut(s) | 340 |
| FokI | GGATG | 4 cut(s) | 77, 100, 131, 186 |
| HaeIII | GGCC | 3 cut(s) | 76, 139, 192 |
| Hin1II | CATG | 1 cut(s) | 344 |
| HindIII | AAGCTT | 1 cut(s) | 356 |
| HinfI | GANTC | 3 cut(s) | 224, 278, 395 |
| HphI | GGTGA | 5 cut(s) | 37, 42, 52, 71, 157 |
| Hpy188I | TCNGA | 2 cut(s) | 118, 125 |
| Hpy188III | TCNNGA | 3 cut(s) | 211, 221, 275 |
| Hpy99I | CGWCG | 1 cut(s) | 191 |
| HpyAV | CCTTC | 1 cut(s) | 251 |
| HpyCH4III | ACNGT | 3 cut(s) | 292, 365, 384 |
| HpyF3I | CTNAG | 1 cut(s) | 176 |
| Hsp92II | CATG | 1 cut(s) | 344 |
| Kzo9I | GATC | 3 cut(s) | 4, 120, 307 |
| MaeIII | GTNAC | 1 cut(s) | 39 |
| MalI | GATC | 3 cut(s) | 6, 122, 309 |
| MboI | GATC | 3 cut(s) | 4, 120, 307 |
| MboII | GAAGA | 5 cut(s) | 219, 277, 317, 378, 390 |
| MfeI | CAATTG | 1 cut(s) | 258 |
| MflI | RGATCY | 3 cut(s) | 4, 120, 307 |
| MluCI | AATT | 4 cut(s) | 15, 161, 258, 344 |
| MmeI | TCCRAC | 1 cut(s) | 148 |
| MunI | CAATTG | 1 cut(s) | 258 |
| MvnI | CGCG | 1 cut(s) | 212 |
| NdeII | GATC | 3 cut(s) | 4, 120, 307 |
| NlaIII | CATG | 1 cut(s) | 344 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 140 |
| NmuCI | GTSAC | 1 cut(s) | 39 |
| NruI | TCGCGA | 1 cut(s) | 212 |
| PfeI | GAWTC | 3 cut(s) | 224, 278, 395 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 140 |
| PspPI | GGNCC | 2 cut(s) | 138, 191 |
| PstNI | CAGNNNCTG | 1 cut(s) | 183 |
| PsuI | RGATCY | 3 cut(s) | 4, 120, 307 |
| RruI | TCGCGA | 1 cut(s) | 212 |
| Sau3AI | GATC | 3 cut(s) | 4, 120, 307 |
| Sau96I | GGNCC | 2 cut(s) | 138, 191 |
| SetI | ASST | 7 cut(s) | 23, 50, 65, 177, 182, 353, 360 |
| SgeI | CNNG | 8 cut(s) | 84, 130, 147, 223, 233, 261, 287, 353 |
| Sse9I | AATT | 4 cut(s) | 15, 161, 258, 344 |
| TaaI | ACNGT | 3 cut(s) | 292, 365, 384 |
| TasI | AATT | 4 cut(s) | 15, 161, 258, 344 |
| TfiI | GAWTC | 3 cut(s) | 224, 278, 395 |
| TscAI | CASTG | 2 cut(s) | 295, 368 |
| TseFI | GTSAC | 1 cut(s) | 39 |
| Tsp45I | GTSAC | 1 cut(s) | 39 |
| TspDTI | ATGAA | 3 cut(s) | 309, 357, 378 |
| TspGWI | ACGGA | 1 cut(s) | 226 |
| TspRI | CASTG | 2 cut(s) | 295, 368 |