pycom12659g00090

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012659
Physical Location & Seq
Forward (+)
225061 .. 225448
388 bp
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UTR
Exon/CDS
Intron
pycom12659g00090.1

Sequence Viewer

Length: 294 bp
ATGTTTACAACATTCTTTAATAGTCATGCAATTAAAAACCAAATCCTTATCATTGTGTTGGAAGGTACCCTAAGACACAAACAAACACACAAAAACAACTTTAAAACAACTCTTTTTGGGTTTTTTCAAAACTGTTTTGCAATTTTTTTAGGCGATAAAATCCCACGAAAATCATGTAAAATCATGCAAAAGCAACTTATTTACCACCCCCCCCCCACACACACACACTTAAATCAAACATTGTCCTCAATGTTTCAAACAAAGACTCACATTCAAACAAACAATATAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

98

Amino Acids

11.37

Weight (kDa)

10.19

Isoelectric Point (pI)

31.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024652)

Species Orthologous Gene IDs
pyrus_communis pycom07g10660 pycom12659g00090 pycom2381g00020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 65
AccB1I GGYRCC 1 cut(s) 65
AfaI GTAC 1 cut(s) 67
AgsI TTSAA 3 cut(s) 128, 257, 275
Asp718I GGTACC 1 cut(s) 65
BanI GGYRCC 1 cut(s) 65
BmiI GGNNCC 1 cut(s) 67
BshNI GGYRCC 1 cut(s) 65
BspLI GGNNCC 1 cut(s) 67
BspT107I GGYRCC 1 cut(s) 65
Bst4CI ACNGT 1 cut(s) 134
BstDEI CTNAG 1 cut(s) 71
Csp6I GTAC 1 cut(s) 66
CviAII CATG 3 cut(s) 26, 174, 184
CviQI GTAC 1 cut(s) 66
DdeI CTNAG 1 cut(s) 71
DraI TTTAAA 1 cut(s) 103
FaeI CATG 3 cut(s) 29, 177, 187
FaiI YATR 4 cut(s) 27, 175, 185, 287
FatI CATG 3 cut(s) 25, 173, 183
Hin1II CATG 3 cut(s) 29, 177, 187
HinfI GANTC 1 cut(s) 265
Hpy166II GTNNAC 1 cut(s) 6
Hpy8I GTNNAC 1 cut(s) 6
HpyAV CCTTC 1 cut(s) 56
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4V TGCA 3 cut(s) 29, 140, 187
HpyF3I CTNAG 1 cut(s) 71
Hsp92II CATG 3 cut(s) 29, 177, 187
KpnI GGTACC 1 cut(s) 69
MluCI AATT 2 cut(s) 30, 141
MlyI GAGTC 1 cut(s) 259
MmeI TCCRAC 1 cut(s) 39
MnlI CCTC 1 cut(s) 256
MseI TTAA 4 cut(s) 18, 33, 102, 230
NlaIII CATG 3 cut(s) 29, 177, 187
NlaIV GGNNCC 1 cut(s) 67
PleI GAGTC 1 cut(s) 259
PpsI GAGTC 1 cut(s) 259
PspN4I GGNNCC 1 cut(s) 67
RsaI GTAC 1 cut(s) 67
RsaNI GTAC 1 cut(s) 66
SaqAI TTAA 4 cut(s) 18, 33, 102, 230
SchI GAGTC 1 cut(s) 259
SetI ASST 1 cut(s) 67
SgeI CNNG 4 cut(s) 38, 177, 186, 196
Sse9I AATT 2 cut(s) 30, 141
TaaI ACNGT 1 cut(s) 134
TasI AATT 2 cut(s) 30, 141
Tru1I TTAA 4 cut(s) 18, 33, 102, 230
Tru9I TTAA 4 cut(s) 18, 33, 102, 230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.