pycom12g10990

Phosphoinositide phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
13077322 .. 13078286
965 bp
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UTR
Exon/CDS
Intron
pycom12g10990.2

Sequence Viewer

Length: 330 bp
ATGCACAGTTGCAGGGGACTGGAGTGCTGGATTCTTCTGAAAACATTTCTATGTTTGCTGAAGACTATCAAACATTTAGAGCATTCAAATGTTGTGGAGCGCCATTTTTTTGATCTTTCGCAAAGATATGGAGAGACAATGGCAGTAGACCTAACTGATAAACATGGTGATGAAGGTCAACTAAGCACGGCATTTTCTGCTGAAATGCAAAATCTACCAAACGTGAGATACGTTTCATTTGACTTTCATCATGTATGTGGCAACTCAAACTTTGAAAACCTAAAGCTTCTATATGAGCAGATCTCAGACCAATTTGAAAAGCAAGGGTAA

Protein Analysis

110

Amino Acids

12.71

Weight (kDa)

5.73

Isoelectric Point (pI)

24.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029427)

Species Orthologous Gene IDs
pyrus_communis pycom12g10990 pycom12g16260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 147
AcuI CTGAAG 1 cut(s) 80
AgsI TTSAA 3 cut(s) 87, 275, 317
AluBI AGCT 1 cut(s) 286
AluI AGCT 1 cut(s) 286
Alw26I GTCTC 1 cut(s) 128
AspLEI GCGC 1 cut(s) 102
AsuHPI GGTGA 1 cut(s) 179
BbsI GAAGAC 1 cut(s) 68
BceAI ACGGC 1 cut(s) 204
BcoDI GTCTC 1 cut(s) 128
BfoI RGCGCY 1 cut(s) 103
BglII AGATCT 1 cut(s) 300
BpiI GAAGAC 1 cut(s) 68
BplI GAGNNNNNCTC 2 cut(s) 287, 319
BpmI CTGGAG 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 24
BseMII CTCAG 1 cut(s) 318
BseNI ACTGG 1 cut(s) 24
BslFI GGGAC 1 cut(s) 30
BsmAI GTCTC 1 cut(s) 128
BsmFI GGGAC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 82
Bsp143I GATC 2 cut(s) 112, 300
BspCNI CTCAG 1 cut(s) 317
BsrI ACTGG 1 cut(s) 24
BssMI GATC 2 cut(s) 112, 300
Bst4CI ACNGT 1 cut(s) 8
BstAPI GCANNNNNTGC 1 cut(s) 197
BstDEI CTNAG 2 cut(s) 182, 304
BstH2I RGCGCY 1 cut(s) 103
BstHHI GCGC 1 cut(s) 102
BstKTI GATC 2 cut(s) 115, 303
BstMAI GTCTC 1 cut(s) 128
BstMBI GATC 2 cut(s) 112, 300
BstMWI GCNNNNNNNGC 1 cut(s) 197
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 300
BstYI RGATCY 1 cut(s) 300
CfoI GCGC 1 cut(s) 102
CspCI CAANNNNNGTGG 2 cut(s) 75, 110
CviAII CATG 2 cut(s) 164, 251
CviJI RGCY 1 cut(s) 286
CviKI_1 RGCY 1 cut(s) 286
DdeI CTNAG 2 cut(s) 182, 304
DpnI GATC 2 cut(s) 114, 302
DpnII GATC 2 cut(s) 112, 300
Eco57I CTGAAG 1 cut(s) 80
FaeI CATG 2 cut(s) 167, 254
FaiI YATR 7 cut(s) 52, 129, 165, 252, 256, 292, 294
FaqI GGGAC 1 cut(s) 30
FatI CATG 2 cut(s) 163, 250
FblI GTMKAC 1 cut(s) 147
GlaI GCGC 1 cut(s) 101
GsuI CTGGAG 1 cut(s) 41
HaeII RGCGCY 1 cut(s) 103
HhaI GCGC 1 cut(s) 102
Hin1II CATG 2 cut(s) 167, 254
Hin6I GCGC 1 cut(s) 100
HinP1I GCGC 1 cut(s) 100
HincII GTYRAC 1 cut(s) 179
HindII GTYRAC 1 cut(s) 179
HindIII AAGCTT 1 cut(s) 284
HinfI GANTC 1 cut(s) 31
HphI GGTGA 1 cut(s) 179
Hpy166II GTNNAC 2 cut(s) 148, 179
Hpy188I TCNGA 2 cut(s) 39, 307
Hpy8I GTNNAC 2 cut(s) 148, 179
HpyAV CCTTC 1 cut(s) 167
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4IV ACGT 2 cut(s) 222, 231
HpyCH4V TGCA 3 cut(s) 4, 12, 208
HpyF10VI GCNNNNNNNGC 1 cut(s) 197
HpyF3I CTNAG 2 cut(s) 182, 304
HpySE526I ACGT 2 cut(s) 222, 231
Hsp92II CATG 2 cut(s) 167, 254
HspAI GCGC 1 cut(s) 100
Kzo9I GATC 2 cut(s) 112, 300
LmnI GCTCC 1 cut(s) 97
LpnPI CCDG 2 cut(s) 5, 13
MaeII ACGT 2 cut(s) 222, 231
MalI GATC 2 cut(s) 114, 302
MboI GATC 2 cut(s) 112, 300
MboII GAAGA 2 cut(s) 26, 73
MflI RGATCY 1 cut(s) 300
MluCI AATT 1 cut(s) 311
MslI CAYNNNNRTG 4 cut(s) 49, 87, 168, 255
Mva1269I GAATGC 1 cut(s) 82
MwoI GCNNNNNNNGC 1 cut(s) 197
NdeII GATC 2 cut(s) 112, 300
NlaIII CATG 2 cut(s) 167, 254
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 82
PfeI GAWTC 1 cut(s) 31
PsuI RGATCY 1 cut(s) 300
RseI CAYNNNNRTG 4 cut(s) 49, 87, 168, 255
Sau3AI GATC 2 cut(s) 112, 300
SetI ASST 6 cut(s) 153, 178, 225, 234, 282, 288
SgeI CNNG 7 cut(s) 25, 32, 40, 176, 199, 235, 263
SmiMI CAYNNNNRTG 4 cut(s) 49, 87, 168, 255
Sse9I AATT 1 cut(s) 311
TaaI ACNGT 1 cut(s) 8
TaiI ACGT 2 cut(s) 225, 234
TasI AATT 1 cut(s) 311
TfiI GAWTC 1 cut(s) 31
TspDTI ATGAA 3 cut(s) 186, 225, 236
XmiI GTMKAC 1 cut(s) 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.