pycom12g16260

Phosphoinositide phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
18652528 .. 18653314
787 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGGCAATAGACTTAACAGATAAACATGGCGATGAAGGTCAACTAAGCACGGCATTTTTCTGCCGAAATGCAAAATCTACCAAACGTGAGGTTACAATTTGCATATTTATCAGATACGTTTCATTTGACTTTCATCATGCATGTGGTAACTCAAACTTTGAAAACCTAAAGGTTCTATACGAGCAGATCGATCACAGCATTTTGAAAAGCAAGGATACTTCCTCGTAG

Protein Analysis

76

Amino Acids

8.57

Weight (kDa)

6.39

Isoelectric Point (pI)

17.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029427)

Species Orthologous Gene IDs
pyrus_communis pycom12g10990 pycom12g16260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 161, 205
BceAI ACGGC 1 cut(s) 66
BciVI GTATCC 1 cut(s) 208
BfuI GTATCC 1 cut(s) 208
Bsa29I ATCGAT 1 cut(s) 189
BseCI ATCGAT 1 cut(s) 189
BshVI ATCGAT 1 cut(s) 189
Bsp143I GATC 2 cut(s) 186, 190
BspDI ATCGAT 1 cut(s) 189
BssMI GATC 2 cut(s) 186, 190
BstDEI CTNAG 1 cut(s) 44
BstKTI GATC 2 cut(s) 189, 193
BstMBI GATC 2 cut(s) 186, 190
BstNSI RCATGY 1 cut(s) 144
Bsu15I ATCGAT 1 cut(s) 189
BsuI GTATCC 1 cut(s) 208
BsuTUI ATCGAT 1 cut(s) 189
BtgZI GCGATG 1 cut(s) 45
ClaI ATCGAT 1 cut(s) 189
CviAII CATG 3 cut(s) 26, 137, 141
DdeI CTNAG 1 cut(s) 44
DpnI GATC 2 cut(s) 188, 192
DpnII GATC 2 cut(s) 186, 190
EcoT22I ATGCAT 1 cut(s) 142
FaeI CATG 3 cut(s) 29, 140, 144
FaiI YATR 5 cut(s) 27, 104, 138, 142, 178
FatI CATG 3 cut(s) 25, 136, 140
Hin1II CATG 3 cut(s) 29, 140, 144
HincII GTYRAC 1 cut(s) 41
HindII GTYRAC 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 41
Hpy188I TCNGA 1 cut(s) 113
Hpy8I GTNNAC 1 cut(s) 41
HpyAV CCTTC 1 cut(s) 29
HpyCH4IV ACGT 2 cut(s) 85, 117
HpyCH4V TGCA 3 cut(s) 71, 102, 140
HpyF3I CTNAG 1 cut(s) 44
HpySE526I ACGT 2 cut(s) 85, 117
Hsp92II CATG 3 cut(s) 29, 140, 144
Kzo9I GATC 2 cut(s) 186, 190
MaeII ACGT 2 cut(s) 85, 117
MaeIII GTNAC 2 cut(s) 91, 146
MalI GATC 2 cut(s) 188, 192
MboI GATC 2 cut(s) 186, 190
MluCI AATT 1 cut(s) 96
MnlI CCTC 1 cut(s) 82
Mph1103I ATGCAT 1 cut(s) 142
MseI TTAA 1 cut(s) 14
MslI CAYNNNNRTG 2 cut(s) 30, 141
NdeII GATC 2 cut(s) 186, 190
NlaIII CATG 3 cut(s) 29, 140, 144
NsiI ATGCAT 1 cut(s) 142
NspI RCATGY 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 186
RseI CAYNNNNRTG 2 cut(s) 30, 141
SaqAI TTAA 1 cut(s) 14
Sau3AI GATC 2 cut(s) 186, 190
SetI ASST 6 cut(s) 40, 88, 93, 120, 168, 174
SgeI CNNG 7 cut(s) 38, 61, 98, 149, 153, 193, 223
SmiMI CAYNNNNRTG 2 cut(s) 30, 141
Sse9I AATT 1 cut(s) 96
TaiI ACGT 2 cut(s) 88, 120
TaqI TCGA 1 cut(s) 189
TasI AATT 1 cut(s) 96
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TspDTI ATGAA 3 cut(s) 48, 111, 122
XceI RCATGY 1 cut(s) 144
Zsp2I ATGCAT 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.