Lipase (class 3)
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1170000.v1.1 |
| pyrus_communis | pycom12g17270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 842 |
| AccII | CGCG | 1 cut(s) | 653 |
| AciI | CCGC | 4 cut(s) | 410, 482, 977, 1182 |
| AclWI | GGATC | 1 cut(s) | 1171 |
| AcoI | YGGCCR | 2 cut(s) | 246, 1063 |
| AcsI | RAATTY | 5 cut(s) | 180, 217, 296, 809, 932 |
| AcuI | CTGAAG | 1 cut(s) | 1553 |
| AcvI | CACGTG | 1 cut(s) | 1297 |
| AdeI | CACNNNGTG | 1 cut(s) | 371 |
| AfaI | GTAC | 7 cut(s) | 310, 570, 763, 951, 992, 1366, 1450 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 842 |
| AflIII | ACRYGT | 1 cut(s) | 952 |
| AgsI | TTSAA | 7 cut(s) | 70, 194, 674, 748, 768, 1055, 1480 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 541 |
| AhlI | ACTAGT | 1 cut(s) | 311 |
| AjnI | CCWGG | 3 cut(s) | 135, 537, 1541 |
| AluBI | AGCT | 7 cut(s) | 589, 601, 729, 856, 1051, 1123, 1271 |
| AluI | AGCT | 7 cut(s) | 589, 601, 729, 856, 1051, 1123, 1271 |
| Alw21I | GWGCWC | 2 cut(s) | 11, 1023 |
| Alw26I | GTCTC | 2 cut(s) | 145, 935 |
| Alw44I | GTGCAC | 1 cut(s) | 7 |
| AlwI | GGATC | 1 cut(s) | 1171 |
| Ama87I | CYCGRG | 1 cut(s) | 550 |
| AoxI | GGCC | 9 cut(s) | 27, 53, 241, 246, 661, 683, 1063, 1186, 1583 |
| ApaLI | GTGCAC | 1 cut(s) | 7 |
| ApoI | RAATTY | 5 cut(s) | 180, 217, 296, 809, 932 |
| AseI | ATTAAT | 1 cut(s) | 1401 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 763 |
| AspLEI | GCGC | 2 cut(s) | 655, 1531 |
| AspS9I | GGNCC | 3 cut(s) | 211, 242, 1583 |
| AsuC2I | CCSGG | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 4 cut(s) | 383, 449, 1049, 1158 |
| AsuII | TTCGAA | 2 cut(s) | 815, 921 |
| AsuNHI | GCTAGC | 1 cut(s) | 601 |
| AvaI | CYCGRG | 1 cut(s) | 550 |
| AvaII | GGWCC | 1 cut(s) | 211 |
| BaeGI | GKGCMC | 1 cut(s) | 11 |
| BalI | TGGCCA | 1 cut(s) | 1065 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1432, 1464 |
| BauI | CACGAG | 1 cut(s) | 250 |
| BbrPI | CACGTG | 1 cut(s) | 1297 |
| BbsI | GAAGAC | 2 cut(s) | 423, 1447 |
| Bbv12I | GWGCWC | 2 cut(s) | 11, 1023 |
| BccI | CCATC | 3 cut(s) | 117, 343, 503 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 78, 112 |
| BciT130I | CCWGG | 3 cut(s) | 137, 539, 1543 |
| BclI | TGATCA | 1 cut(s) | 316 |
| BcnI | CCSGG | 1 cut(s) | 245 |
| BcoDI | GTCTC | 2 cut(s) | 145, 935 |
| BcuI | ACTAGT | 1 cut(s) | 311 |
| BfaI | CTAG | 5 cut(s) | 312, 602, 1116, 1208, 1266 |
| BfoI | RGCGCY | 1 cut(s) | 1532 |
| BisI | GCNGC | 1 cut(s) | 978 |
| BlsI | GCNGC | 1 cut(s) | 979 |
| BmcAI | AGTACT | 2 cut(s) | 310, 763 |
| Bme1390I | CCNGG | 4 cut(s) | 137, 245, 539, 1543 |
| Bme18I | GGWCC | 1 cut(s) | 211 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 541 |
| BmeT110I | CYCGRG | 1 cut(s) | 550 |
| BmgT120I | GGNCC | 3 cut(s) | 211, 242, 1583 |
| BmiI | GGNNCC | 3 cut(s) | 213, 340, 967 |
| BmrFI | CCNGG | 4 cut(s) | 137, 245, 539, 1543 |
| BmsI | GCATC | 3 cut(s) | 132, 1095, 1236 |
| BmtI | GCTAGC | 1 cut(s) | 605 |
| BpiI | GAAGAC | 2 cut(s) | 423, 1447 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 533, 565 |
| Bpu14I | TTCGAA | 2 cut(s) | 815, 921 |
| BpuEI | CTTGAG | 1 cut(s) | 1295 |
| BpuMI | CCSGG | 1 cut(s) | 245 |
| BsaAI | YACGTR | 1 cut(s) | 1297 |
| BsaBI | GATNNNNATC | 1 cut(s) | 526 |
| BsaI | GGTCTC | 1 cut(s) | 145 |
| BsaJI | CCNNGG | 3 cut(s) | 207, 572, 664 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 842 |
| Bse118I | RCCGGY | 1 cut(s) | 1147 |
| Bse1I | ACTGG | 1 cut(s) | 1066 |
| Bse3DI | GCAATG | 2 cut(s) | 118, 1083 |
| Bse8I | GATNNNNATC | 1 cut(s) | 526 |
| BseBI | CCWGG | 3 cut(s) | 137, 539, 1543 |
| BseDI | CCNNGG | 3 cut(s) | 207, 572, 664 |
| BseGI | GGATG | 4 cut(s) | 109, 354, 1222, 1230 |
| BseJI | GATNNNNATC | 1 cut(s) | 526 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 842 |
| BseMI | GCAATG | 2 cut(s) | 118, 1083 |
| BseMII | CTCAG | 1 cut(s) | 114 |
| BseNI | ACTGG | 1 cut(s) | 1066 |
| BseRI | GAGGAG | 6 cut(s) | 31, 765, 953, 1100, 1298, 1490 |
| BseSI | GKGCMC | 1 cut(s) | 11 |
| Bsh1236I | CGCG | 1 cut(s) | 653 |
| BshFI | GGCC | 9 cut(s) | 29, 55, 243, 248, 663, 685, 1065, 1188, 1585 |
| BsiHKAI | GWGCWC | 2 cut(s) | 11, 1023 |
| BsiHKCI | CYCGRG | 1 cut(s) | 550 |
| BsiSI | CCGG | 3 cut(s) | 26, 245, 1148 |
| BslFI | GGGAC | 2 cut(s) | 197, 1247 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 842 |
| BsmAI | GTCTC | 2 cut(s) | 145, 935 |
| BsmBI | CGTCTC | 1 cut(s) | 935 |
| BsmFI | GGGAC | 2 cut(s) | 197, 1247 |
| BsnI | GGCC | 9 cut(s) | 29, 55, 243, 248, 663, 685, 1065, 1188, 1585 |
| Bso31I | GGTCTC | 1 cut(s) | 145 |
| BsoBI | CYCGRG | 1 cut(s) | 550 |
| Bsp119I | TTCGAA | 2 cut(s) | 815, 921 |
| Bsp1286I | GDGCHC | 2 cut(s) | 11, 1023 |
| Bsp1407I | TGTACA | 1 cut(s) | 949 |
| Bsp143I | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| Bsp19I | CCATGG | 2 cut(s) | 207, 572 |
| BspACI | CCGC | 4 cut(s) | 410, 482, 977, 1182 |
| BspANI | GGCC | 9 cut(s) | 29, 55, 243, 248, 663, 685, 1065, 1188, 1585 |
| BspCNI | CTCAG | 1 cut(s) | 113 |
| BspFNI | CGCG | 1 cut(s) | 653 |
| BspHI | TCATGA | 1 cut(s) | 427 |
| BspLI | GGNNCC | 3 cut(s) | 213, 340, 967 |
| BspOI | GCTAGC | 1 cut(s) | 605 |
| BspPI | GGATC | 1 cut(s) | 1171 |
| BspT104I | TTCGAA | 2 cut(s) | 815, 921 |
| BspTNI | GGTCTC | 1 cut(s) | 145 |
| BsrDI | GCAATG | 2 cut(s) | 118, 1083 |
| BsrFI | RCCGGY | 1 cut(s) | 1147 |
| BsrGI | TGTACA | 1 cut(s) | 949 |
| BsrI | ACTGG | 1 cut(s) | 1066 |
| BssAI | RCCGGY | 1 cut(s) | 1147 |
| BssECI | CCNNGG | 3 cut(s) | 207, 572, 664 |
| BssMI | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| BssSI | CACGAG | 1 cut(s) | 250 |
| BssT1I | CCWWGG | 2 cut(s) | 207, 572 |
| Bst2BI | CACGAG | 1 cut(s) | 250 |
| Bst2UI | CCWGG | 3 cut(s) | 137, 539, 1543 |
| Bst4CI | ACNGT | 3 cut(s) | 170, 446, 1037 |
| Bst6I | CTCTTC | 2 cut(s) | 1146, 1572 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1003 |
| BstAUI | TGTACA | 1 cut(s) | 949 |
| BstBAI | YACGTR | 1 cut(s) | 1297 |
| BstBI | TTCGAA | 2 cut(s) | 815, 921 |
| BstC8I | GCNNGC | 5 cut(s) | 7, 281, 603, 657, 661 |
| BstDEI | CTNAG | 4 cut(s) | 50, 100, 224, 597 |
| BstDSI | CCRYGG | 2 cut(s) | 207, 572 |
| BstEII | GGTNACC | 1 cut(s) | 371 |
| BstF5I | GGATG | 4 cut(s) | 109, 354, 1222, 1230 |
| BstFNI | CGCG | 1 cut(s) | 653 |
| BstH2I | RGCGCY | 1 cut(s) | 1532 |
| BstHHI | GCGC | 2 cut(s) | 655, 1531 |
| BstKTI | GATC | 6 cut(s) | 230, 319, 530, 642, 1166, 1204 |
| BstMAI | GTCTC | 2 cut(s) | 145, 935 |
| BstMBI | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 726, 1003 |
| BstNI | CCWGG | 3 cut(s) | 137, 539, 1543 |
| BstNSI | RCATGY | 3 cut(s) | 283, 659, 956 |
| BstPI | GGTNACC | 1 cut(s) | 371 |
| BstSCI | CCNGG | 4 cut(s) | 135, 243, 537, 1541 |
| BstSLI | GKGCMC | 1 cut(s) | 11 |
| BstUI | CGCG | 1 cut(s) | 653 |
| BstV2I | GAAGAC | 2 cut(s) | 423, 1447 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 349, 1073, 1297 |
| BsuRI | GGCC | 9 cut(s) | 29, 55, 243, 248, 663, 685, 1065, 1188, 1585 |
| BtgI | CCRYGG | 2 cut(s) | 207, 572 |
| BtsCI | GGATG | 4 cut(s) | 109, 354, 1222, 1230 |
| Cac8I | GCNNGC | 5 cut(s) | 7, 281, 603, 657, 661 |
| CciI | TCATGA | 1 cut(s) | 427 |
| CfoI | GCGC | 2 cut(s) | 655, 1531 |
| Cfr10I | RCCGGY | 1 cut(s) | 1147 |
| Cfr13I | GGNCC | 3 cut(s) | 211, 242, 1583 |
| Csp6I | GTAC | 7 cut(s) | 309, 569, 762, 950, 991, 1365, 1449 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 916, 951 |
| CviQI | GTAC | 7 cut(s) | 309, 569, 762, 950, 991, 1365, 1449 |
| DdeI | CTNAG | 4 cut(s) | 50, 100, 224, 597 |
| DpnI | GATC | 6 cut(s) | 229, 318, 529, 641, 1165, 1203 |
| DpnII | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| DraI | TTTAAA | 1 cut(s) | 1320 |
| DraIII | CACNNNGTG | 1 cut(s) | 371 |
| DriI | GACNNNNNGTC | 1 cut(s) | 541 |
| EaeI | YGGCCR | 2 cut(s) | 246, 1063 |
| Eam1104I | CTCTTC | 2 cut(s) | 1146, 1572 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 541 |
| EarI | CTCTTC | 2 cut(s) | 1146, 1572 |
| Eco130I | CCWWGG | 2 cut(s) | 207, 572 |
| Eco31I | GGTCTC | 1 cut(s) | 145 |
| Eco32I | GATATC | 1 cut(s) | 1575 |
| Eco47I | GGWCC | 1 cut(s) | 211 |
| Eco57I | CTGAAG | 1 cut(s) | 1553 |
| Eco72I | CACGTG | 1 cut(s) | 1297 |
| Eco88I | CYCGRG | 1 cut(s) | 550 |
| Eco91I | GGTNACC | 1 cut(s) | 371 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1583 |
| EcoO65I | GGTNACC | 1 cut(s) | 371 |
| EcoRII | CCWGG | 3 cut(s) | 135, 537, 1541 |
| EcoRV | GATATC | 1 cut(s) | 1575 |
| EcoT14I | CCWWGG | 2 cut(s) | 207, 572 |
| EcoT22I | ATGCAT | 2 cut(s) | 285, 1251 |
| ErhI | CCWWGG | 2 cut(s) | 207, 572 |
| Esp3I | CGTCTC | 1 cut(s) | 935 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 590, 622 |
| FaqI | GGGAC | 2 cut(s) | 197, 1247 |
| FauNDI | CATATG | 1 cut(s) | 261 |
| FbaI | TGATCA | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 1 cut(s) | 978 |
| FokI | GGATG | 4 cut(s) | 96, 361, 1217, 1229 |
| Fsp4HI | GCNGC | 1 cut(s) | 978 |
| FspBI | CTAG | 5 cut(s) | 312, 602, 1116, 1208, 1266 |
| GlaI | GCGC | 2 cut(s) | 654, 1530 |
| GluI | GCNGC | 1 cut(s) | 978 |
| HaeII | RGCGCY | 1 cut(s) | 1532 |
| HaeIII | GGCC | 9 cut(s) | 29, 55, 243, 248, 663, 685, 1065, 1188, 1585 |
| HapII | CCGG | 3 cut(s) | 26, 245, 1148 |
| HhaI | GCGC | 2 cut(s) | 655, 1531 |
| Hin6I | GCGC | 2 cut(s) | 653, 1529 |
| HinP1I | GCGC | 2 cut(s) | 653, 1529 |
| HincII | GTYRAC | 1 cut(s) | 106 |
| HindII | GTYRAC | 1 cut(s) | 106 |
| HindIII | AAGCTT | 2 cut(s) | 1049, 1121 |
| HinfI | GANTC | 3 cut(s) | 542, 887, 1389 |
| HpaI | GTTAAC | 1 cut(s) | 106 |
| HpaII | CCGG | 3 cut(s) | 26, 245, 1148 |
| HphI | GGTGA | 4 cut(s) | 383, 449, 1049, 1158 |
| Hpy166II | GTNNAC | 5 cut(s) | 9, 106, 958, 1040, 1099 |
| Hpy188I | TCNGA | 4 cut(s) | 89, 580, 1419, 1572 |
| Hpy188III | TCNNGA | 5 cut(s) | 428, 550, 643, 900, 1590 |
| Hpy8I | GTNNAC | 5 cut(s) | 9, 106, 958, 1040, 1099 |
| HpyAV | CCTTC | 3 cut(s) | 464, 616, 878 |
| HpyCH4III | ACNGT | 3 cut(s) | 170, 446, 1037 |
| HpyCH4IV | ACGT | 2 cut(s) | 1296, 1444 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 726, 1003 |
| HpyF3I | CTNAG | 4 cut(s) | 50, 100, 224, 597 |
| HpySE526I | ACGT | 2 cut(s) | 1296, 1444 |
| HspAI | GCGC | 2 cut(s) | 653, 1529 |
| Ksp22I | TGATCA | 1 cut(s) | 316 |
| KspAI | GTTAAC | 1 cut(s) | 106 |
| Kzo9I | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| LmnI | GCTCC | 6 cut(s) | 338, 381, 394, 1018, 1113, 1526 |
| LweI | GCATC | 3 cut(s) | 132, 1095, 1236 |
| MaeI | CTAG | 5 cut(s) | 312, 602, 1116, 1208, 1266 |
| MaeII | ACGT | 2 cut(s) | 1296, 1444 |
| MaeIII | GTNAC | 6 cut(s) | 371, 695, 790, 1153, 1194, 1335 |
| MalI | GATC | 6 cut(s) | 229, 318, 529, 641, 1165, 1203 |
| MboI | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| MfeI | CAATTG | 1 cut(s) | 343 |
| MhlI | GDGCHC | 2 cut(s) | 11, 1023 |
| MlsI | TGGCCA | 1 cut(s) | 1065 |
| MluCI | AATT | 9 cut(s) | 180, 217, 296, 343, 690, 809, 932, 998, 1055 |
| MluNI | TGGCCA | 1 cut(s) | 1065 |
| MlyI | GAGTC | 2 cut(s) | 551, 881 |
| MmeI | TCCRAC | 2 cut(s) | 59, 1194 |
| Mox20I | TGGCCA | 1 cut(s) | 1065 |
| Mph1103I | ATGCAT | 2 cut(s) | 285, 1251 |
| MroXI | GAANNNNTTC | 1 cut(s) | 763 |
| MscI | TGGCCA | 1 cut(s) | 1065 |
| MseI | TTAA | 4 cut(s) | 105, 1319, 1379, 1401 |
| MslI | CAYNNNNRTG | 3 cut(s) | 81, 799, 1254 |
| Msp20I | TGGCCA | 1 cut(s) | 1065 |
| MspA1I | CMGCKG | 1 cut(s) | 856 |
| MspI | CCGG | 3 cut(s) | 26, 245, 1148 |
| MspR9I | CCNGG | 4 cut(s) | 137, 245, 539, 1543 |
| MunI | CAATTG | 1 cut(s) | 343 |
| MvaI | CCWGG | 3 cut(s) | 137, 539, 1543 |
| MvnI | CGCG | 1 cut(s) | 653 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 726, 1003 |
| NciI | CCSGG | 1 cut(s) | 245 |
| NcoI | CCATGG | 2 cut(s) | 207, 572 |
| NdeI | CATATG | 1 cut(s) | 261 |
| NdeII | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| NheI | GCTAGC | 1 cut(s) | 601 |
| NlaIV | GGNNCC | 3 cut(s) | 213, 340, 967 |
| NmeAIII | GCCGAG | 1 cut(s) | 689 |
| NmuCI | GTSAC | 3 cut(s) | 371, 1153, 1335 |
| NsiI | ATGCAT | 2 cut(s) | 285, 1251 |
| NspI | RCATGY | 3 cut(s) | 283, 659, 956 |
| NspV | TTCGAA | 2 cut(s) | 815, 921 |
| PaeI | GCATGC | 2 cut(s) | 283, 659 |
| PaeR7I | CTCGAG | 1 cut(s) | 550 |
| PagI | TCATGA | 1 cut(s) | 427 |
| PciI | ACATGT | 1 cut(s) | 952 |
| PdmI | GAANNNNTTC | 1 cut(s) | 763 |
| PfeI | GAWTC | 1 cut(s) | 1389 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 842 |
| PfoI | TCCNGGA | 1 cut(s) | 1541 |
| PkrI | GCNGC | 1 cut(s) | 979 |
| PleI | GAGTC | 2 cut(s) | 550, 881 |
| PmaCI | CACGTG | 1 cut(s) | 1297 |
| PmlI | CACGTG | 1 cut(s) | 1297 |
| PpsI | GAGTC | 2 cut(s) | 550, 881 |
| Ppu21I | YACGTR | 1 cut(s) | 1297 |
| PscI | ACATGT | 1 cut(s) | 952 |
| PshBI | ATTAAT | 1 cut(s) | 1401 |
| Psp6I | CCWGG | 3 cut(s) | 135, 537, 1541 |
| PspCI | CACGTG | 1 cut(s) | 1297 |
| PspEI | GGTNACC | 1 cut(s) | 371 |
| PspGI | CCWGG | 3 cut(s) | 135, 537, 1541 |
| PspN4I | GGNNCC | 3 cut(s) | 213, 340, 967 |
| PspPI | GGNCC | 3 cut(s) | 211, 242, 1583 |
| PvuII | CAGCTG | 1 cut(s) | 856 |
| RsaI | GTAC | 7 cut(s) | 310, 570, 763, 951, 992, 1366, 1450 |
| RsaNI | GTAC | 7 cut(s) | 309, 569, 762, 950, 991, 1365, 1449 |
| RseI | CAYNNNNRTG | 3 cut(s) | 81, 799, 1254 |
| SaqAI | TTAA | 4 cut(s) | 105, 1319, 1379, 1401 |
| SatI | GCNGC | 1 cut(s) | 978 |
| Sau3AI | GATC | 6 cut(s) | 227, 316, 527, 639, 1163, 1201 |
| Sau96I | GGNCC | 3 cut(s) | 211, 242, 1583 |
| ScaI | AGTACT | 2 cut(s) | 310, 763 |
| SchI | GAGTC | 2 cut(s) | 551, 881 |
| ScrFI | CCNGG | 4 cut(s) | 137, 245, 539, 1543 |
| SduI | GDGCHC | 2 cut(s) | 11, 1023 |
| SfaNI | GCATC | 3 cut(s) | 132, 1095, 1236 |
| Sfr274I | CTCGAG | 1 cut(s) | 550 |
| SfuI | TTCGAA | 2 cut(s) | 815, 921 |
| SinI | GGWCC | 1 cut(s) | 211 |
| SlaI | CTCGAG | 1 cut(s) | 550 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 81, 799, 1254 |
| SmlI | CTYRAG | 2 cut(s) | 550, 1310 |
| SmoI | CTYRAG | 2 cut(s) | 550, 1310 |
| SpeI | ACTAGT | 1 cut(s) | 311 |
| SphI | GCATGC | 2 cut(s) | 283, 659 |
| Sse9I | AATT | 9 cut(s) | 180, 217, 296, 343, 690, 809, 932, 998, 1055 |
| SsiI | CCGC | 4 cut(s) | 410, 482, 977, 1182 |
| SspI | AATATT | 2 cut(s) | 388, 1373 |
| SspMI | CTAG | 5 cut(s) | 312, 602, 1116, 1208, 1266 |
| StyD4I | CCNGG | 4 cut(s) | 135, 243, 537, 1541 |
| StyI | CCWWGG | 2 cut(s) | 207, 572 |
| TaaI | ACNGT | 3 cut(s) | 170, 446, 1037 |
| TaiI | ACGT | 2 cut(s) | 1299, 1447 |
| TaqI | TCGA | 4 cut(s) | 551, 815, 921, 1200 |
| TasI | AATT | 9 cut(s) | 180, 217, 296, 343, 690, 809, 932, 998, 1055 |
| TatI | WGTACW | 4 cut(s) | 308, 761, 949, 1448 |
| TauI | GCSGC | 1 cut(s) | 980 |
| TfiI | GAWTC | 1 cut(s) | 1389 |
| Tru1I | TTAA | 4 cut(s) | 105, 1319, 1379, 1401 |
| Tru9I | TTAA | 4 cut(s) | 105, 1319, 1379, 1401 |
| TseFI | GTSAC | 3 cut(s) | 371, 1153, 1335 |
| Tsp45I | GTSAC | 3 cut(s) | 371, 1153, 1335 |
| TspDTI | ATGAA | 8 cut(s) | 278, 694, 860, 987, 991, 1317, 1461, 1502 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 842 |
| VneI | GTGCAC | 1 cut(s) | 7 |
| VpaK11BI | GGWCC | 1 cut(s) | 211 |
| VspI | ATTAAT | 1 cut(s) | 1401 |
| XapI | RAATTY | 5 cut(s) | 180, 217, 296, 809, 932 |
| XceI | RCATGY | 3 cut(s) | 283, 659, 956 |
| XhoI | CTCGAG | 1 cut(s) | 550 |
| XmnI | GAANNNNTTC | 1 cut(s) | 763 |
| XspI | CTAG | 5 cut(s) | 312, 602, 1116, 1208, 1266 |
| ZrmI | AGTACT | 2 cut(s) | 310, 763 |
| Zsp2I | ATGCAT | 2 cut(s) | 285, 1251 |