Domain of unknown function (DUF4378)
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g03030 pycom13g03180 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 365, 788, 1559 |
| AccB1I | GGYRCC | 1 cut(s) | 1409 |
| AccI | GTMKAC | 3 cut(s) | 94, 2219, 2277 |
| AccII | CGCG | 1 cut(s) | 2364 |
| AciI | CCGC | 5 cut(s) | 1124, 1592, 2186, 2629, 2653 |
| AclWI | GGATC | 8 cut(s) | 732, 1140, 1153, 1166, 1179, 1256, 1409, 1937 |
| AcoI | YGGCCR | 1 cut(s) | 2630 |
| AcuI | CTGAAG | 2 cut(s) | 920, 1211 |
| AcyI | GRCGYC | 1 cut(s) | 1002 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 126, 156, 210, 211, 214, 2639 |
| AflII | CTTAAG | 1 cut(s) | 2032 |
| AflIII | ACRYGT | 2 cut(s) | 2362, 2543 |
| AjiI | CACGTC | 2 cut(s) | 1141, 2546 |
| AjnI | CCWGG | 2 cut(s) | 1119, 2685 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 385, 417 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 604, 636 |
| AluBI | AGCT | 7 cut(s) | 41, 137, 224, 570, 798, 987, 2437 |
| AluI | AGCT | 7 cut(s) | 41, 137, 224, 570, 798, 987, 2437 |
| Alw26I | GTCTC | 2 cut(s) | 882, 993 |
| AlwI | GGATC | 8 cut(s) | 732, 1140, 1153, 1166, 1179, 1256, 1409, 1937 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 891 |
| AoxI | GGCC | 4 cut(s) | 597, 851, 1116, 2630 |
| ApaI | GGGCCC | 2 cut(s) | 855, 1120 |
| ApeKI | GCWGC | 1 cut(s) | 2437 |
| AseI | ATTAAT | 2 cut(s) | 1661, 2604 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 634, 1544 |
| AspS9I | GGNCC | 5 cut(s) | 825, 851, 852, 1116, 1117 |
| AsuHPI | GGTGA | 2 cut(s) | 498, 916 |
| AsuNHI | GCTAGC | 1 cut(s) | 1646 |
| AvaII | GGWCC | 1 cut(s) | 825 |
| BaeGI | GKGCMC | 2 cut(s) | 855, 1120 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1845, 1878 |
| BamHI | GGATCC | 2 cut(s) | 1145, 1171 |
| BanI | GGYRCC | 1 cut(s) | 1409 |
| BanII | GRGCYC | 2 cut(s) | 855, 1120 |
| BbsI | GAAGAC | 3 cut(s) | 1463, 1835, 2092 |
| BbvI | GCAGC | 1 cut(s) | 2424 |
| BccI | CCATC | 4 cut(s) | 551, 1049, 1392, 1894 |
| BceAI | ACGGC | 1 cut(s) | 1546 |
| BciT130I | CCWGG | 2 cut(s) | 1121, 2687 |
| BclI | TGATCA | 1 cut(s) | 2257 |
| BcoDI | GTCTC | 2 cut(s) | 882, 993 |
| BfaI | CTAG | 6 cut(s) | 879, 1154, 1647, 2345, 2426, 2529 |
| BfmI | CTRYAG | 1 cut(s) | 1857 |
| BfrI | CTTAAG | 1 cut(s) | 2032 |
| BglII | AGATCT | 1 cut(s) | 1156 |
| BisI | GCNGC | 3 cut(s) | 2438, 2630, 2654 |
| BlsI | GCNGC | 3 cut(s) | 2439, 2631, 2655 |
| BmcAI | AGTACT | 1 cut(s) | 1599 |
| Bme1390I | CCNGG | 2 cut(s) | 1121, 2687 |
| Bme18I | GGWCC | 1 cut(s) | 825 |
| BmgBI | CACGTC | 2 cut(s) | 1141, 2546 |
| BmgT120I | GGNCC | 5 cut(s) | 825, 851, 852, 1116, 1117 |
| BmiI | GGNNCC | 7 cut(s) | 826, 853, 1117, 1118, 1147, 1173, 1411 |
| BmrFI | CCNGG | 2 cut(s) | 1121, 2687 |
| BmrI | ACTGGG | 1 cut(s) | 1308 |
| BmsI | GCATC | 2 cut(s) | 2039, 2428 |
| BmtI | GCTAGC | 1 cut(s) | 1650 |
| BmuI | ACTGGG | 1 cut(s) | 1308 |
| BpiI | GAAGAC | 3 cut(s) | 1463, 1835, 2092 |
| Bsa29I | ATCGAT | 1 cut(s) | 2512 |
| BsaHI | GRCGYC | 1 cut(s) | 1002 |
| BsaJI | CCNNGG | 3 cut(s) | 150, 1119, 2685 |
| BsaWI | WCCGGW | 1 cut(s) | 1062 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 604, 634 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 126, 156, 210, 211, 214, 2639 |
| Bse1I | ACTGG | 4 cut(s) | 896, 1314, 1421, 2207 |
| Bse3DI | GCAATG | 1 cut(s) | 2356 |
| BseBI | CCWGG | 2 cut(s) | 1121, 2687 |
| BseCI | ATCGAT | 1 cut(s) | 2512 |
| BseDI | CCNNGG | 3 cut(s) | 150, 1119, 2685 |
| BseGI | GGATG | 1 cut(s) | 2073 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 126, 156, 210, 211, 214, 2639 |
| BseMI | GCAATG | 1 cut(s) | 2356 |
| BseMII | CTCAG | 3 cut(s) | 218, 635, 1448 |
| BseNI | ACTGG | 4 cut(s) | 896, 1314, 1421, 2207 |
| BseRI | GAGGAG | 5 cut(s) | 396, 625, 1752, 1755, 2385 |
| BseSI | GKGCMC | 2 cut(s) | 855, 1120 |
| BseXI | GCAGC | 1 cut(s) | 2424 |
| BseYI | CCCAGC | 1 cut(s) | 1298 |
| Bsh1236I | CGCG | 1 cut(s) | 2364 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2512 |
| BshFI | GGCC | 4 cut(s) | 599, 853, 1118, 2632 |
| BshNI | GGYRCC | 1 cut(s) | 1409 |
| BshVI | ATCGAT | 1 cut(s) | 2512 |
| BsiEI | CGRYCG | 1 cut(s) | 2512 |
| BsiSI | CCGG | 1 cut(s) | 1063 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 126, 156, 210, 211, 214, 2639 |
| BsmAI | GTCTC | 2 cut(s) | 882, 993 |
| BsmBI | CGTCTC | 1 cut(s) | 993 |
| BsnI | GGCC | 4 cut(s) | 599, 853, 1118, 2632 |
| Bsp120I | GGGCCC | 2 cut(s) | 851, 1116 |
| Bsp1286I | GDGCHC | 2 cut(s) | 855, 1120 |
| BspACI | CCGC | 5 cut(s) | 1124, 1592, 2186, 2629, 2653 |
| BspANI | GGCC | 4 cut(s) | 599, 853, 1118, 2632 |
| BspCNI | CTCAG | 3 cut(s) | 219, 636, 1447 |
| BspDI | ATCGAT | 1 cut(s) | 2512 |
| BspFNI | CGCG | 1 cut(s) | 2364 |
| BspHI | TCATGA | 2 cut(s) | 279, 1104 |
| BspLI | GGNNCC | 7 cut(s) | 826, 853, 1117, 1118, 1147, 1173, 1411 |
| BspOI | GCTAGC | 1 cut(s) | 1650 |
| BspPI | GGATC | 8 cut(s) | 732, 1140, 1153, 1166, 1179, 1256, 1409, 1937 |
| BspT107I | GGYRCC | 1 cut(s) | 1409 |
| BspTI | CTTAAG | 1 cut(s) | 2032 |
| BsrDI | GCAATG | 1 cut(s) | 2356 |
| BsrI | ACTGG | 4 cut(s) | 896, 1314, 1421, 2207 |
| BssECI | CCNNGG | 3 cut(s) | 150, 1119, 2685 |
| BssNAI | GTATAC | 2 cut(s) | 2220, 2278 |
| BssNI | GRCGYC | 1 cut(s) | 1002 |
| BssT1I | CCWWGG | 1 cut(s) | 150 |
| Bst1107I | GTATAC | 2 cut(s) | 2220, 2278 |
| Bst2UI | CCWGG | 2 cut(s) | 1121, 2687 |
| Bst4CI | ACNGT | 6 cut(s) | 1015, 1381, 1841, 1861, 2135, 2255 |
| Bst6I | CTCTTC | 1 cut(s) | 1817 |
| BstACI | GRCGYC | 1 cut(s) | 1002 |
| BstAFI | CTTAAG | 1 cut(s) | 2032 |
| BstC8I | GCNNGC | 6 cut(s) | 601, 868, 1648, 2362, 2431, 2435 |
| BstDEI | CTNAG | 5 cut(s) | 227, 521, 644, 1434, 1925 |
| BstF5I | GGATG | 1 cut(s) | 2073 |
| BstFNI | CGCG | 1 cut(s) | 2364 |
| BstMAI | GTCTC | 2 cut(s) | 882, 993 |
| BstMCI | CGRYCG | 1 cut(s) | 2512 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 804, 910 |
| BstNI | CCWGG | 2 cut(s) | 1121, 2687 |
| BstNSI | RCATGY | 2 cut(s) | 870, 1920 |
| BstSCI | CCNGG | 2 cut(s) | 1119, 2685 |
| BstSFI | CTRYAG | 1 cut(s) | 1857 |
| BstSLI | GKGCMC | 2 cut(s) | 855, 1120 |
| BstUI | CGCG | 1 cut(s) | 2364 |
| BstV1I | GCAGC | 1 cut(s) | 2424 |
| BstV2I | GAAGAC | 3 cut(s) | 1463, 1835, 2092 |
| BstX2I | RGATCY | 4 cut(s) | 1145, 1156, 1171, 1261 |
| BstYI | RGATCY | 4 cut(s) | 1145, 1156, 1171, 1261 |
| BstZ17I | GTATAC | 2 cut(s) | 2220, 2278 |
| Bsu15I | ATCGAT | 1 cut(s) | 2512 |
| BsuRI | GGCC | 4 cut(s) | 599, 853, 1118, 2632 |
| BsuTUI | ATCGAT | 1 cut(s) | 2512 |
| BtrI | CACGTC | 2 cut(s) | 1141, 2546 |
| BtsCI | GGATG | 1 cut(s) | 2073 |
| BtsI | GCAGTG | 1 cut(s) | 1139 |
| BtsIMutI | CAGTG | 4 cut(s) | 896, 1020, 1139, 2131 |
| Cac8I | GCNNGC | 6 cut(s) | 601, 868, 1648, 2362, 2431, 2435 |
| CaiI | CAGNNNCTG | 1 cut(s) | 891 |
| CciI | TCATGA | 2 cut(s) | 279, 1104 |
| Cfr13I | GGNCC | 5 cut(s) | 825, 851, 852, 1116, 1117 |
| ClaI | ATCGAT | 1 cut(s) | 2512 |
| CseI | GACGC | 1 cut(s) | 1010 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2670, 2705 |
| CviAII | CATG | 8 cut(s) | 280, 821, 867, 1105, 1583, 1696, 1917, 2261 |
| DdeI | CTNAG | 5 cut(s) | 227, 521, 644, 1434, 1925 |
| DraI | TTTAAA | 6 cut(s) | 79, 321, 529, 1732, 1987, 2478 |
| EaeI | YGGCCR | 1 cut(s) | 2630 |
| Eam1104I | CTCTTC | 1 cut(s) | 1817 |
| EarI | CTCTTC | 1 cut(s) | 1817 |
| Eco130I | CCWWGG | 1 cut(s) | 150 |
| Eco24I | GRGCYC | 2 cut(s) | 855, 1120 |
| Eco32I | GATATC | 1 cut(s) | 1102 |
| Eco47I | GGWCC | 1 cut(s) | 825 |
| Eco57I | CTGAAG | 2 cut(s) | 920, 1211 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1116 |
| EcoRI | GAATTC | 1 cut(s) | 1185 |
| EcoRII | CCWGG | 2 cut(s) | 1119, 2685 |
| EcoRV | GATATC | 1 cut(s) | 1102 |
| EcoT14I | CCWWGG | 1 cut(s) | 150 |
| EcoT22I | ATGCAT | 1 cut(s) | 1588 |
| EcoT38I | GRGCYC | 2 cut(s) | 855, 1120 |
| ErhI | CCWWGG | 1 cut(s) | 150 |
| Esp3I | CGTCTC | 1 cut(s) | 993 |
| FaeI | CATG | 8 cut(s) | 283, 824, 870, 1108, 1586, 1699, 1920, 2264 |
| FatI | CATG | 8 cut(s) | 279, 820, 866, 1104, 1582, 1695, 1916, 2260 |
| FauI | CCCGC | 1 cut(s) | 1117 |
| FauNDI | CATATG | 2 cut(s) | 423, 2332 |
| FbaI | TGATCA | 1 cut(s) | 2257 |
| FblI | GTMKAC | 3 cut(s) | 94, 2219, 2277 |
| Fnu4HI | GCNGC | 3 cut(s) | 2438, 2630, 2654 |
| FokI | GGATG | 1 cut(s) | 2060 |
| FriOI | GRGCYC | 2 cut(s) | 855, 1120 |
| Fsp4HI | GCNGC | 3 cut(s) | 2438, 2630, 2654 |
| FspBI | CTAG | 6 cut(s) | 879, 1154, 1647, 2345, 2426, 2529 |
| GluI | GCNGC | 3 cut(s) | 2438, 2630, 2654 |
| GsaI | CCCAGC | 1 cut(s) | 1302 |
| HaeIII | GGCC | 4 cut(s) | 599, 853, 1118, 2632 |
| HapII | CCGG | 1 cut(s) | 1063 |
| HgaI | GACGC | 1 cut(s) | 1010 |
| Hin1I | GRCGYC | 1 cut(s) | 1002 |
| Hin1II | CATG | 8 cut(s) | 283, 824, 870, 1108, 1586, 1699, 1920, 2264 |
| HindIII | AAGCTT | 1 cut(s) | 796 |
| HinfI | GANTC | 5 cut(s) | 111, 401, 1195, 2247, 2489 |
| HpaII | CCGG | 1 cut(s) | 1063 |
| HphI | GGTGA | 2 cut(s) | 498, 916 |
| Hpy166II | GTNNAC | 8 cut(s) | 95, 115, 481, 587, 1073, 1394, 2220, 2278 |
| Hpy188III | TCNNGA | 7 cut(s) | 280, 701, 1105, 1259, 1670, 2237, 2705 |
| Hpy8I | GTNNAC | 8 cut(s) | 95, 115, 481, 587, 1073, 1394, 2220, 2278 |
| Hpy99I | CGWCG | 3 cut(s) | 474, 1145, 2243 |
| HpyAV | CCTTC | 5 cut(s) | 931, 1302, 1517, 2314, 2637 |
| HpyCH4III | ACNGT | 6 cut(s) | 1015, 1381, 1841, 1861, 2135, 2255 |
| HpyCH4IV | ACGT | 6 cut(s) | 164, 472, 933, 1140, 1620, 2545 |
| HpyCH4V | TGCA | 9 cut(s) | 427, 1586, 2003, 2088, 2131, 2168, 2211, 2419, 2696 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 804, 910 |
| HpyF3I | CTNAG | 5 cut(s) | 227, 521, 644, 1434, 1925 |
| HpySE526I | ACGT | 6 cut(s) | 164, 472, 933, 1140, 1620, 2545 |
| Hsp92I | GRCGYC | 1 cut(s) | 1002 |
| Hsp92II | CATG | 8 cut(s) | 283, 824, 870, 1108, 1586, 1699, 1920, 2264 |
| Ksp22I | TGATCA | 1 cut(s) | 2257 |
| Lsp1109I | GCAGC | 1 cut(s) | 2424 |
| LweI | GCATC | 2 cut(s) | 2039, 2428 |
| MaeI | CTAG | 6 cut(s) | 879, 1154, 1647, 2345, 2426, 2529 |
| MaeII | ACGT | 6 cut(s) | 164, 472, 933, 1140, 1620, 2545 |
| MaeIII | GTNAC | 4 cut(s) | 894, 1822, 1912, 2314 |
| MfeI | CAATTG | 1 cut(s) | 1473 |
| MflI | RGATCY | 4 cut(s) | 1145, 1156, 1171, 1261 |
| MhlI | GDGCHC | 2 cut(s) | 855, 1120 |
| MluI | ACGCGT | 1 cut(s) | 2362 |
| MlyI | GAGTC | 1 cut(s) | 120 |
| MmeI | TCCRAC | 4 cut(s) | 137, 1123, 2106, 2488 |
| Mph1103I | ATGCAT | 1 cut(s) | 1588 |
| MroXI | GAANNNNTTC | 2 cut(s) | 634, 1544 |
| MspCI | CTTAAG | 1 cut(s) | 2032 |
| MspI | CCGG | 1 cut(s) | 1063 |
| MspR9I | CCNGG | 2 cut(s) | 1121, 2687 |
| MunI | CAATTG | 1 cut(s) | 1473 |
| MvaI | CCWGG | 2 cut(s) | 1121, 2687 |
| MvnI | CGCG | 1 cut(s) | 2364 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 804, 910 |
| NdeI | CATATG | 2 cut(s) | 423, 2332 |
| NheI | GCTAGC | 1 cut(s) | 1646 |
| NlaIII | CATG | 8 cut(s) | 283, 824, 870, 1108, 1586, 1699, 1920, 2264 |
| NlaIV | GGNNCC | 7 cut(s) | 826, 853, 1117, 1118, 1147, 1173, 1411 |
| NmuCI | GTSAC | 1 cut(s) | 894 |
| NsiI | ATGCAT | 1 cut(s) | 1588 |
| NspI | RCATGY | 2 cut(s) | 870, 1920 |
| PaeI | GCATGC | 1 cut(s) | 870 |
| PagI | TCATGA | 2 cut(s) | 279, 1104 |
| PdmI | GAANNNNTTC | 2 cut(s) | 634, 1544 |
| PfeI | GAWTC | 4 cut(s) | 401, 1195, 2247, 2489 |
| PkrI | GCNGC | 3 cut(s) | 2439, 2631, 2655 |
| Ple19I | CGATCG | 1 cut(s) | 2512 |
| PleI | GAGTC | 1 cut(s) | 119 |
| PpsI | GAGTC | 1 cut(s) | 119 |
| PshBI | ATTAAT | 2 cut(s) | 1661, 2604 |
| PsiI | TTATAA | 3 cut(s) | 365, 788, 1559 |
| Psp6I | CCWGG | 2 cut(s) | 1119, 2685 |
| PspFI | CCCAGC | 1 cut(s) | 1298 |
| PspGI | CCWGG | 2 cut(s) | 1119, 2685 |
| PspN4I | GGNNCC | 7 cut(s) | 826, 853, 1117, 1118, 1147, 1173, 1411 |
| PspOMI | GGGCCC | 2 cut(s) | 851, 1116 |
| PspPI | GGNCC | 5 cut(s) | 825, 851, 852, 1116, 1117 |
| PstNI | CAGNNNCTG | 1 cut(s) | 891 |
| PsuI | RGATCY | 4 cut(s) | 1145, 1156, 1171, 1261 |
| PvuI | CGATCG | 1 cut(s) | 2512 |
| SatI | GCNGC | 3 cut(s) | 2438, 2630, 2654 |
| Sau96I | GGNCC | 5 cut(s) | 825, 851, 852, 1116, 1117 |
| ScaI | AGTACT | 1 cut(s) | 1599 |
| SchI | GAGTC | 1 cut(s) | 120 |
| ScrFI | CCNGG | 2 cut(s) | 1121, 2687 |
| SduI | GDGCHC | 2 cut(s) | 855, 1120 |
| SfaNI | GCATC | 2 cut(s) | 2039, 2428 |
| SfcI | CTRYAG | 1 cut(s) | 1857 |
| SinI | GGWCC | 1 cut(s) | 825 |
| SmlI | CTYRAG | 1 cut(s) | 2032 |
| SmoI | CTYRAG | 1 cut(s) | 2032 |
| SphI | GCATGC | 1 cut(s) | 870 |
| SsiI | CCGC | 5 cut(s) | 1124, 1592, 2186, 2629, 2653 |
| SspI | AATATT | 3 cut(s) | 1230, 1337, 2141 |
| SspMI | CTAG | 6 cut(s) | 879, 1154, 1647, 2345, 2426, 2529 |
| StyD4I | CCNGG | 2 cut(s) | 1119, 2685 |
| StyI | CCWWGG | 1 cut(s) | 150 |
| TaaI | ACNGT | 6 cut(s) | 1015, 1381, 1841, 1861, 2135, 2255 |
| TaiI | ACGT | 6 cut(s) | 167, 475, 936, 1143, 1623, 2548 |
| TaqI | TCGA | 9 cut(s) | 433, 469, 1548, 1846, 1868, 2119, 2238, 2446, 2512 |
| TatI | WGTACW | 6 cut(s) | 442, 586, 1305, 1597, 2114, 2659 |
| TauI | GCSGC | 2 cut(s) | 2632, 2656 |
| TfiI | GAWTC | 4 cut(s) | 401, 1195, 2247, 2489 |
| TscAI | CASTG | 4 cut(s) | 903, 1020, 1139, 2138 |
| TseFI | GTSAC | 1 cut(s) | 894 |
| TseI | GCWGC | 1 cut(s) | 2437 |
| Tsp45I | GTSAC | 1 cut(s) | 894 |
| TspGWI | ACGGA | 1 cut(s) | 2066 |
| TspRI | CASTG | 4 cut(s) | 903, 1020, 1139, 2138 |
| Vha464I | CTTAAG | 1 cut(s) | 2032 |
| VpaK11BI | GGWCC | 1 cut(s) | 825 |
| VspI | ATTAAT | 2 cut(s) | 1661, 2604 |
| XceI | RCATGY | 2 cut(s) | 870, 1920 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1435 |
| XmiI | GTMKAC | 3 cut(s) | 94, 2219, 2277 |
| XmnI | GAANNNNTTC | 2 cut(s) | 634, 1544 |
| XspI | CTAG | 6 cut(s) | 879, 1154, 1647, 2345, 2426, 2529 |
| ZrmI | AGTACT | 1 cut(s) | 1599 |
| Zsp2I | ATGCAT | 1 cut(s) | 1588 |