pycom13g14800

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
10720786 .. 10721148
363 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 363 bp
ATGGGAGATGGGCTAGATAGCCCAGATGAATATGTACGTGGTGGGCGACATGGTTCTCCTGCTACGCATAAAAACTCACCTGATTTCAGAAAAAGAGACCCCAATAGGGACTTGAATACCGGCGTAGAATTAGGGAGGATTGAAACTGGCACTGGGTCTGGGAGAAGATGGGGTTTAGATGGGTTGGAACGACAAGAGTCTCAGAGAGACAGCCCACAAAGTGCTGGGAGAGCACGGGAAACTCCAAGAAACCGTGATCTAGATAGAGAACGTGCAGTGGCTGAGGCAAAGGTTTGGGGCGAAAATTGGAGAGAAAAGAAGCGAGCAAATGCGATGGGTAGCTTTGACGGTACAAATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000187 GO:0001932 GO:0001934 GO:0002218 GO:0002221 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0002757 GO:0002758 GO:0002764 GO:0002831 GO:0002833 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009814 GO:0009816 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023052 GO:0023056 GO:0031224 GO:0031225 GO:0031226 GO:0031323 GO:0031325 GO:0031347 GO:0031349 GO:0031399 GO:0031401 GO:0032101 GO:0032103 GO:0032147 GO:0032268 GO:0032270 GO:0033674 GO:0035690 GO:0036211 GO:0038023 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0042742 GO:0043085 GO:0043170 GO:0043207 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043900 GO:0043902 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0045859 GO:0045860 GO:0045937 GO:0046658 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071323 GO:0071417 GO:0071495 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0098542 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

13.45

Weight (kDa)

8.14

Isoelectric Point (pI)

52.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0022214)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g17410
pyrus_communis pycom13g14800
rosa_samantha Rh4AG231200 Rh4CG245600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 221
AfaI GTAC 2 cut(s) 36, 352
AfiI CCNNNNNNNGG 1 cut(s) 106
AgsI TTSAA 2 cut(s) 115, 143
AluBI AGCT 1 cut(s) 342
AluI AGCT 1 cut(s) 342
Alw21I GWGCWC 1 cut(s) 235
Alw26I GTCTC 3 cut(s) 90, 201, 204
AlwNI CAGNNNCTG 1 cut(s) 281
AsuHPI GGTGA 1 cut(s) 69
Bbv12I GWGCWC 1 cut(s) 235
BbvCI CCTCAGC 1 cut(s) 282
BccI CCATC 4 cut(s) 2, 162, 173, 328
BcoDI GTCTC 3 cut(s) 90, 201, 204
BfaI CTAG 2 cut(s) 14, 260
BmrI ACTGGG 1 cut(s) 162
BmuI ACTGGG 1 cut(s) 162
BoxI GACNNNNGTC 1 cut(s) 196
Bpu10I CCTNAGC 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 38
BsaI GGTCTC 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse118I RCCGGY 1 cut(s) 119
Bse1I ACTGG 2 cut(s) 151, 157
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMII CTCAG 2 cut(s) 215, 273
BseNI ACTGG 2 cut(s) 151, 157
BseYI CCCAGC 1 cut(s) 224
BsgI GTGCAG 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 235
BsiSI CCGG 1 cut(s) 120
BslFI GGGAC 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 3 cut(s) 90, 201, 204
BsmFI GGGAC 1 cut(s) 122
Bso31I GGTCTC 1 cut(s) 90
Bsp1286I GDGCHC 1 cut(s) 235
Bsp143I GATC 1 cut(s) 256
BspCNI CTCAG 2 cut(s) 214, 274
BspTNI GGTCTC 1 cut(s) 90
BsrFI RCCGGY 1 cut(s) 119
BsrI ACTGG 2 cut(s) 151, 157
BssAI RCCGGY 1 cut(s) 119
BssMI GATC 1 cut(s) 256
Bst4CI ACNGT 2 cut(s) 254, 350
BstBAI YACGTR 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 324
BstDEI CTNAG 2 cut(s) 201, 282
BstKTI GATC 1 cut(s) 259
BstMAI GTCTC 3 cut(s) 90, 201, 204
BstMBI GATC 1 cut(s) 256
BstMWI GCNNNNNNNGC 1 cut(s) 230
BstPAI GACNNNNGTC 1 cut(s) 196
BtgZI GCGATG 1 cut(s) 347
BtsI GCAGTG 1 cut(s) 282
BtsIMutI CAGTG 2 cut(s) 150, 282
Cac8I GCNNGC 1 cut(s) 324
CaiI CAGNNNCTG 1 cut(s) 281
Cfr10I RCCGGY 1 cut(s) 119
Csp6I GTAC 2 cut(s) 35, 351
CviAII CATG 1 cut(s) 50
CviJI RGCY 5 cut(s) 13, 21, 213, 281, 342
CviKI_1 RGCY 5 cut(s) 13, 21, 213, 281, 342
CviQI GTAC 2 cut(s) 35, 351
DdeI CTNAG 2 cut(s) 201, 282
DpnI GATC 1 cut(s) 258
DpnII GATC 1 cut(s) 256
DraIII CACNNNGTG 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 90
FaeI CATG 1 cut(s) 53
FaiI YATR 3 cut(s) 33, 51, 69
FaqI GGGAC 1 cut(s) 122
FatI CATG 1 cut(s) 49
FspBI CTAG 2 cut(s) 14, 260
GsaI CCCAGC 1 cut(s) 228
HapII CCGG 1 cut(s) 120
Hin1II CATG 1 cut(s) 53
HinfI GANTC 1 cut(s) 197
HpaII CCGG 1 cut(s) 120
HphI GGTGA 1 cut(s) 69
Hpy188I TCNGA 2 cut(s) 89, 204
Hpy188III TCNNGA 1 cut(s) 260
HpyCH4III ACNGT 2 cut(s) 254, 350
HpyCH4IV ACGT 2 cut(s) 37, 271
HpyCH4V TGCA 1 cut(s) 275
HpyF10VI GCNNNNNNNGC 1 cut(s) 230
HpyF3I CTNAG 2 cut(s) 201, 282
HpySE526I ACGT 2 cut(s) 37, 271
Hsp92II CATG 1 cut(s) 53
Kzo9I GATC 1 cut(s) 256
LpnPI CCDG 8 cut(s) 36, 72, 93, 132, 133, 138, 144, 210
MaeI CTAG 2 cut(s) 14, 260
MaeII ACGT 2 cut(s) 37, 271
MalI GATC 1 cut(s) 258
MboI GATC 1 cut(s) 256
MboII GAAGA 1 cut(s) 177
MhlI GDGCHC 1 cut(s) 235
MluCI AATT 2 cut(s) 128, 304
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 1 cut(s) 165
MnlI CCTC 2 cut(s) 129, 277
MspI CCGG 1 cut(s) 120
MwoI GCNNNNNNNGC 1 cut(s) 230
NdeII GATC 1 cut(s) 256
NlaIII CATG 1 cut(s) 53
PcsI WCGNNNNNNNCGW 1 cut(s) 43
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
Ppu21I YACGTR 1 cut(s) 38
PshAI GACNNNNGTC 1 cut(s) 196
PspFI CCCAGC 1 cut(s) 224
PstNI CAGNNNCTG 1 cut(s) 281
RsaI GTAC 2 cut(s) 36, 352
RsaNI GTAC 2 cut(s) 35, 351
Sau3AI GATC 1 cut(s) 256
SchI GAGTC 1 cut(s) 206
SduI GDGCHC 1 cut(s) 235
SetI ASST 5 cut(s) 40, 82, 274, 294, 344
Sse9I AATT 2 cut(s) 128, 304
SspMI CTAG 2 cut(s) 14, 260
TaaI ACNGT 2 cut(s) 254, 350
TaiI ACGT 2 cut(s) 40, 274
TasI AATT 2 cut(s) 128, 304
TscAI CASTG 2 cut(s) 157, 282
TspDTI ATGAA 1 cut(s) 42
TspRI CASTG 2 cut(s) 157, 282
XbaI TCTAGA 1 cut(s) 259
XspI CTAG 2 cut(s) 14, 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.