protein ubiquitination
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom02g25800 pycom05g30910 pycom12g04310 pycom13g15270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 17 |
| AclWI | GGATC | 2 cut(s) | 27, 40 |
| AcsI | RAATTY | 2 cut(s) | 69, 98 |
| AgsI | TTSAA | 3 cut(s) | 63, 103, 217 |
| AjnI | CCWGG | 1 cut(s) | 208 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 24, 56 |
| AlwI | GGATC | 2 cut(s) | 27, 40 |
| ApoI | RAATTY | 2 cut(s) | 69, 98 |
| AsuHPI | GGTGA | 1 cut(s) | 143 |
| BamHI | GGATCC | 1 cut(s) | 32 |
| BccI | CCATC | 2 cut(s) | 128, 236 |
| BciT130I | CCWGG | 1 cut(s) | 210 |
| Bme1390I | CCNGG | 1 cut(s) | 210 |
| BmiI | GGNNCC | 1 cut(s) | 34 |
| BmrFI | CCNGG | 1 cut(s) | 210 |
| BmsI | GCATC | 2 cut(s) | 73, 214 |
| Bse1I | ACTGG | 1 cut(s) | 36 |
| BseBI | CCWGG | 1 cut(s) | 210 |
| BseGI | GGATG | 3 cut(s) | 175, 183, 228 |
| BseNI | ACTGG | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 32 |
| BspLI | GGNNCC | 1 cut(s) | 34 |
| BspPI | GGATC | 2 cut(s) | 27, 40 |
| BsrI | ACTGG | 1 cut(s) | 36 |
| BssMI | GATC | 1 cut(s) | 32 |
| Bst2UI | CCWGG | 1 cut(s) | 210 |
| Bst6I | CTCTTC | 1 cut(s) | 73 |
| BstF5I | GGATG | 3 cut(s) | 175, 183, 228 |
| BstKTI | GATC | 1 cut(s) | 35 |
| BstMBI | GATC | 1 cut(s) | 32 |
| BstNI | CCWGG | 1 cut(s) | 210 |
| BstSCI | CCNGG | 1 cut(s) | 208 |
| BstX2I | RGATCY | 1 cut(s) | 32 |
| BstYI | RGATCY | 1 cut(s) | 32 |
| BtsCI | GGATG | 3 cut(s) | 175, 183, 228 |
| BtsIMutI | CAGTG | 1 cut(s) | 43 |
| CviAII | CATG | 1 cut(s) | 95 |
| CviJI | RGCY | 1 cut(s) | 201 |
| CviKI_1 | RGCY | 1 cut(s) | 201 |
| DpnI | GATC | 1 cut(s) | 34 |
| DpnII | GATC | 1 cut(s) | 32 |
| Eam1104I | CTCTTC | 1 cut(s) | 73 |
| EarI | CTCTTC | 1 cut(s) | 73 |
| EcoRI | GAATTC | 1 cut(s) | 98 |
| EcoRII | CCWGG | 1 cut(s) | 208 |
| FaeI | CATG | 1 cut(s) | 98 |
| FaiI | YATR | 5 cut(s) | 17, 96, 158, 180, 256 |
| FatI | CATG | 1 cut(s) | 94 |
| FokI | GGATG | 3 cut(s) | 170, 182, 215 |
| Hin1II | CATG | 1 cut(s) | 98 |
| HphI | GGTGA | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 1 cut(s) | 11 |
| Hsp92II | CATG | 1 cut(s) | 98 |
| Kzo9I | GATC | 1 cut(s) | 32 |
| LpnPI | CCDG | 5 cut(s) | 49, 174, 195, 222, 245 |
| LweI | GCATC | 2 cut(s) | 73, 214 |
| MaeIII | GTNAC | 1 cut(s) | 172 |
| MalI | GATC | 1 cut(s) | 34 |
| MboI | GATC | 1 cut(s) | 32 |
| MboII | GAAGA | 2 cut(s) | 90, 158 |
| MflI | RGATCY | 1 cut(s) | 32 |
| MluCI | AATT | 4 cut(s) | 12, 26, 69, 98 |
| MnlI | CCTC | 2 cut(s) | 100, 115 |
| MspR9I | CCNGG | 1 cut(s) | 210 |
| MvaI | CCWGG | 1 cut(s) | 210 |
| NdeII | GATC | 1 cut(s) | 32 |
| NlaIII | CATG | 1 cut(s) | 98 |
| NlaIV | GGNNCC | 1 cut(s) | 34 |
| NmuCI | GTSAC | 1 cut(s) | 172 |
| PsiI | TTATAA | 1 cut(s) | 17 |
| Psp6I | CCWGG | 1 cut(s) | 208 |
| PspGI | CCWGG | 1 cut(s) | 208 |
| PspN4I | GGNNCC | 1 cut(s) | 34 |
| PsuI | RGATCY | 1 cut(s) | 32 |
| Sau3AI | GATC | 1 cut(s) | 32 |
| ScrFI | CCNGG | 1 cut(s) | 210 |
| SetI | ASST | 4 cut(s) | 111, 116, 126, 179 |
| SfaNI | GCATC | 2 cut(s) | 73, 214 |
| SgeI | CNNG | 7 cut(s) | 48, 75, 107, 173, 221, 222, 244 |
| Sse9I | AATT | 4 cut(s) | 12, 26, 69, 98 |
| StyD4I | CCNGG | 1 cut(s) | 208 |
| TasI | AATT | 4 cut(s) | 12, 26, 69, 98 |
| TscAI | CASTG | 1 cut(s) | 43 |
| TseFI | GTSAC | 1 cut(s) | 172 |
| Tsp45I | GTSAC | 1 cut(s) | 172 |
| TspDTI | ATGAA | 3 cut(s) | 37, 111, 159 |
| TspRI | CASTG | 1 cut(s) | 43 |
| XapI | RAATTY | 2 cut(s) | 69, 98 |