pycom13g26560

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0020393
Physical Location & Seq
Forward (+)
23154899 .. 23159056
4158 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3198 bp
ATGACTTTTGATATGTATCTTTATTATGCATTTCATATAGAGAACTTGAGAAAGATAATTTGGTTGCGATTTAATTTATGCTTTTCATGGTTAATTTGGGGCATTGTCATTCATAACTTTAACCCATTCAATTCACCTAATTTAGTTTCGTCCAAAGCAATTCCCCCCTTTATTAAGTGTGTTAGATTAGTTAGAAAAGTGTTTAAGTCTGTCCAATTTAGTGTTTTGAGTCTTACTATCTATTTGCTAGTATTGTGCTGTTTAGAGTCAGTTAGTGTTTCTAAGTCTAGTTTAGTGTTGTTTAGTCTTTTAAGTCAGGTTAAGTCTTATTTTCGTCAAAATCACTTGTTAGGTCTAGAATTGAGTCTTTTTGATTTAGCATCCCTAGTTAATCCCCGGTCTAGAACAATCCCTACTTGCATATTTAATTTTCACATCAAATTTTGGCGCCGTTGCCGGGTATTAGCAAACTTGCTAATCCCTTTTGTTTGTGTCGTGTTTAGGTGTGTCTTAAGGTCAAGTGTGTCATGTGTTTCTTTGTGTCTTTCTATTTGTATTGCCATGCCCTTTAAGAGTGGTTTTTTCAACCTATTCGTAAGAAAGAGGAAGCAACCAGAACCTAATCCACCTAGTTCAAGTTCAGAGTCCGAATCTAAATTTGAAGAAGAAGAAGGCATGGTTGCGGACAATCGAACAATCAAAGAACTTTCAGCCTCGGGATTAGACAATGTTGTGCCTTTATGCATTCAATATCCTATGGCAGCTCAAGGCAAGACCGATGAGTTGGAGTTTAGCTTGTTGCATCACATTCCCAAATACCATGGGTTGTCCATGGAAGATCGAACCAGTTTAGTCGATGGGAACATTTTGAAGATGAAGGCCTTTCCATTCTCTCTTTTGGAAAAGGCTAAAGATTGGCTTTATGAATTGGCATCTGGAACCGTCACTTCTTGGGAAAGCATGAATCTCTTGAGGAAGAGAATTAGTCGCATTCAACAAAATCAAGGAGAGACTTTTCCAGCGTACTATGAGCGTTTCAAGACTCTAGTTGCATCATGCACTCAACATGAAATGAAGGAAGAGCTTCTAATTCGATACTTTTACGAAGGACTCCTTCTAATTGAGAGACAAATGCTAGATGCCTCGGCAGGGGGTGCTTTGGTTGACAGAACACCGGTGGTTGCCAAGGTCTTAATTGCAAATCGAGCATTGAATGCACAACAATACGAAGGTGTTGGACAAAGAGACACCCCATGGCAGCAAGTCTATGAGGTAAGTTCAATAGCCGAAATTCAATCTCAATTAGCTAATCTCACTATGCTTGTATCTCAGGTTGCCGAAGGATGCAAAGTGCAAGGAATTACACCAAGTGTGTGTGGCGTGTGCTCTGTGCAAGGGCACCTCAATGATCAATGTCCTCAATTGATAGAGAATGGAGGATGGGAAAGCGCAAAGGCCATAGGTTATCAAGGCCAACATCAACAAAGGAATGATCCATACTTAAATACATACAATCCAAGATGGAGAGATCACCCAAATTTCAAGTGGAGGGAATATCAAAGTCCATTCGTACAATCTCAACCTCAATCACAAACTGCCCAACAAAACTCAAGTTCGCTAATTGATAATGATCAAACTATTCAATTACTAACTTCTATATCGCAAGGATTACAAAATCAAAATAATAGAATAACGAACCAAGAAAAAGAGATGAGTGACATAAAGAAGAAAATAGGGCAGATTTCTGAGTTCCTTGGGCAGTTTAGAGAACAAGGCAGTGAAGGGTTATTACTTTTGGAAAGAGAAATGGTTTTGAAAAGTTTTGTTTTTGCCTACTCGCACTTTCTGTTTTGCACTTCAAATAATCATGTTGGACTGCACTTAGGTTACCTGTGCTCTGAATATGTGTATTTACACCTTAAACACTTTCACTCGCACTTATATATTTATCTATTATCACTATCACTTCCGCACTGTGATAAGTCATATTTTGCATGCATGTATAGCTTTCTTATTTGGCGTTTTTGTATTTGTGCAACCAAGTGTGTAATAAGATCAATTGGAAGGCAAATGAAGGAATGTAGTGCAATTCGGCCATATTGGGTGAATCTAAACAAGGCAAAAAGATTGAAGCATGTCACAACCTTGGCCGTGTGTTTCCATATCATCCCATCATTTTATGCATTTCTAGCACCAAGTCAGATTGTGCATTCCACTACTTGTCCACCTCCCTTTTGCGCCAAAATCACTCATTTCCATCACTTAATTCATTTCAGCCATTTTGACACCAACAAACACAATCATTCCCTTCCGTGCAGATTCCATGTTTTAACACCCAAAACATCCCTCACATGCATGATTCACAATCTGACCTTACACTCCATTATCTTCTCCACTTCATATTTGCAGAAATTCACATGCATTGTGATTAAACAAACCACTCAAAGCAACCATCATTTCAGAAATCCAACTCATCCCTTTATCCATGCCGTGTGCCTATTTCACATTTCCAGAATTTGTACAAACAATTCACTTTTGGCAGATTCCACTCACTTGTTGCAGCAAGGACACATGCCATGCGTCCACTACCTCAGAAACCCATCATTCCAGCTGAATTATGCTCTGCCATCTGAGTTAAACAAATTCCAGATCCAATCTGAATGTTGGGGACACATTCCTTTCTATAAAACAAGTCTCACTTCACCAAGAAGTGGTTCCGCAAGTTTTCTTCTTGATTCAGTCCATTTACACACCCATAACCTCTCCCATTTCACTCCATTCTCTGTCCATTTTCTGTCCCAAGGGCAGAAACCATTCAACCAAGCCATTCTACCTTCATCCGCGCCACATTTGGAGAAGCAACACCAAGGAACTCTTCAAGGACTTCAACATCAGTTTTGCTTCAAGGGTTTTTCCTTCTTAATCTTATGTTCACTCATGTTATTTATTTTTATGTTAAACCTTTGTAAACATGAAGTAATTAAGTTAGAATGCTCAGTTTGTCCATCTATTTCTTGTTTCATTTTCTGTTTTAATGGTGACTTTGTTTGTGTAGCCAAGATTAGAACACACATCATGCATAATCTTGCCTGCCGAGTTATTCCCTTTGGTTTTATGAAAGTTTCTTGTACATTACATAATCTTGATTATGAACCAAAGTTGCACATCACAATTAGGTTCATGATTAGAGACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotrans_gag

Protein Analysis

1066

Amino Acids

122.36

Weight (kDa)

8.94

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotrans_gag PF03732 321 - 371 7.4e-07 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0020393)

Species Orthologous Gene IDs
malus_domestica MD00G1190000.v1.1
pyrus_communis pycom01g01650 pycom1341g00050 pycom13g26360 pycom13g26410 pycom13g26560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 447, 1398
AccB7I CCANNNNNTGG 1 cut(s) 2711
AccII CGCG 1 cut(s) 2843
AciI CCGC 4 cut(s) 683, 1970, 2718, 2841
AclWI GGATC 2 cut(s) 1487, 2644
AcoI YGGCCR 2 cut(s) 2093, 2148
AcsI RAATTY 7 cut(s) 440, 656, 1290, 1537, 2411, 2514, 2642
AcyI GRCGYC 1 cut(s) 448
AdeI CACNNNGTG 1 cut(s) 1370
AfaI GTAC 4 cut(s) 1025, 1572, 2521, 3130
AfiI CCNNNNNNNGG 3 cut(s) 457, 1149, 2711
AflII CTTAAG 1 cut(s) 511
AgeI ACCGGT 1 cut(s) 1174
AjuI GAANNNNNNNTTGG 6 cut(s) 43, 75, 2698, 2730, 2859, 2891
AluBI AGCT 6 cut(s) 764, 795, 1084, 1307, 2007, 2611
AluI AGCT 6 cut(s) 764, 795, 1084, 1307, 2007, 2611
Alw21I GWGCWC 2 cut(s) 1388, 1898
Alw26I GTCTC 5 cut(s) 1004, 1120, 1239, 2699, 3183
AlwI GGATC 2 cut(s) 1487, 2644
Ama87I CYCGRG 1 cut(s) 715
AoxI GGCC 5 cut(s) 879, 1455, 1471, 2093, 2148
ApeKI GCWGC 3 cut(s) 761, 1258, 2560
ApoI RAATTY 7 cut(s) 440, 656, 1290, 1537, 2411, 2514, 2642
AsiGI ACCGGT 1 cut(s) 1174
Asp700I GAANNNNTTC 3 cut(s) 1083, 2713, 2813
AspLEI GCGC 4 cut(s) 450, 1451, 2240, 2845
AsuC2I CCSGG 2 cut(s) 397, 458
AsuHPI GGTGA 5 cut(s) 126, 1523, 2116, 2694, 3050
AvaI CYCGRG 1 cut(s) 715
BaeGI GKGCMC 1 cut(s) 1401
BanI GGYRCC 2 cut(s) 447, 1398
BarI GAAGNNNNNNTAC 2 cut(s) 1773, 1805
Bbv12I GWGCWC 2 cut(s) 1388, 1898
BbvI GCAGC 3 cut(s) 773, 1270, 2572
BccI CCATC 9 cut(s) 851, 1434, 1515, 2179, 2265, 2460, 2608, 2635, 3013
BceAI ACGGC 3 cut(s) 435, 2135, 2474
BclI TGATCA 2 cut(s) 1408, 1630
BcnI CCSGG 2 cut(s) 397, 458
BcoDI GTCTC 5 cut(s) 1004, 1120, 1239, 2699, 3183
BfaI CTAG 9 cut(s) 248, 288, 356, 386, 402, 630, 1046, 1136, 2189
BfoI RGCGCY 1 cut(s) 451
BfrI CTTAAG 1 cut(s) 511
BisI GCNGC 3 cut(s) 762, 1259, 2561
BlsI GCNGC 3 cut(s) 763, 1260, 2562
Bme1390I CCNGG 2 cut(s) 397, 458
BmeT110I CYCGRG 1 cut(s) 715
BmiI GGNNCC 4 cut(s) 449, 940, 1400, 2716
BmrFI CCNGG 2 cut(s) 397, 458
BmsI GCATC 6 cut(s) 389, 811, 941, 1061, 1129, 1334
BpuEI CTTGAG 4 cut(s) 67, 750, 991, 1594
BpuMI CCSGG 2 cut(s) 397, 458
BsaBI GATNNNNATC 2 cut(s) 15, 1629
BsaHI GRCGYC 1 cut(s) 448
BsaWI WCCGGW 1 cut(s) 1174
Bsc4I CCNNNNNNNGG 3 cut(s) 457, 1149, 2711
Bse118I RCCGGY 1 cut(s) 1174
Bse1I ACTGG 1 cut(s) 846
Bse8I GATNNNNATC 2 cut(s) 15, 1629
BseGI GGATG 7 cut(s) 380, 1349, 1445, 2166, 2342, 2473, 2837
BseJI GATNNNNATC 2 cut(s) 15, 1629
BseLI CCNNNNNNNGG 3 cut(s) 457, 1149, 2711
BseMII CTCAG 5 cut(s) 1343, 1737, 2605, 2622, 3009
BseNI ACTGG 1 cut(s) 846
BseSI GKGCMC 1 cut(s) 1401
BseXI GCAGC 3 cut(s) 773, 1270, 2572
BsgI GTGCAG 2 cut(s) 1862, 2335
Bsh1236I CGCG 1 cut(s) 2843
BshFI GGCC 5 cut(s) 881, 1457, 1473, 2095, 2150
BshNI GGYRCC 2 cut(s) 447, 1398
BshTI ACCGGT 1 cut(s) 1174
BsiHKAI GWGCWC 2 cut(s) 1388, 1898
BsiHKCI CYCGRG 1 cut(s) 715
BsiSI CCGG 3 cut(s) 397, 457, 1175
BslFI GGGAC 2 cut(s) 2682, 2782
BslI CCNNNNNNNGG 3 cut(s) 457, 1149, 2711
BsmAI GTCTC 5 cut(s) 1004, 1120, 1239, 2699, 3183
BsmFI GGGAC 2 cut(s) 2682, 2782
BsmI GAATGC 5 cut(s) 744, 990, 1219, 2209, 2996
BsnI GGCC 5 cut(s) 881, 1457, 1473, 2095, 2150
BsoBI CYCGRG 1 cut(s) 715
Bsp1286I GDGCHC 3 cut(s) 1388, 1401, 1898
Bsp1407I TGTACA 2 cut(s) 2519, 3128
Bsp143I GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
Bsp19I CCATGG 3 cut(s) 820, 831, 1253
BspACI CCGC 4 cut(s) 683, 1970, 2718, 2841
BspANI GGCC 5 cut(s) 881, 1457, 1473, 2095, 2150
BspCNI CTCAG 5 cut(s) 1342, 1738, 2604, 2623, 3008
BspFNI CGCG 1 cut(s) 2843
BspHI TCATGA 1 cut(s) 3180
BspLI GGNNCC 4 cut(s) 449, 940, 1400, 2716
BspPI GGATC 2 cut(s) 1487, 2644
BspQI GCTCTTC 1 cut(s) 1074
BspT107I GGYRCC 2 cut(s) 447, 1398
BspTI CTTAAG 1 cut(s) 511
BsrFI RCCGGY 1 cut(s) 1174
BsrGI TGTACA 2 cut(s) 2519, 3128
BsrI ACTGG 1 cut(s) 846
BssAI RCCGGY 1 cut(s) 1174
BssMI GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
BssNI GRCGYC 1 cut(s) 448
BssT1I CCWWGG 8 cut(s) 820, 831, 1185, 1253, 1753, 2145, 2800, 2866
Bst4CI ACNGT 2 cut(s) 943, 1976
Bst6I CTCTTC 3 cut(s) 971, 1074, 2880
BstACI GRCGYC 1 cut(s) 448
BstAFI CTTAAG 1 cut(s) 511
BstAPI GCANNNNNTGC 2 cut(s) 1154, 1214
BstAUI TGTACA 2 cut(s) 2519, 3128
BstC8I GCNNGC 2 cut(s) 1996, 3091
BstDEI CTNAG 7 cut(s) 282, 1329, 1746, 1882, 2591, 2631, 2995
BstDSI CCRYGG 3 cut(s) 820, 831, 1253
BstEII GGTNACC 1 cut(s) 1886
BstF5I GGATG 7 cut(s) 380, 1349, 1445, 2166, 2342, 2473, 2837
BstFNI CGCG 1 cut(s) 2843
BstH2I RGCGCY 1 cut(s) 451
BstHHI GCGC 4 cut(s) 450, 1451, 2240, 2845
BstKTI GATC 7 cut(s) 841, 1411, 1495, 1531, 1633, 2057, 2652
BstMAI GTCTC 5 cut(s) 1004, 1120, 1239, 2699, 3183
BstMBI GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
BstMWI GCNNNNNNNGC 5 cut(s) 1154, 1205, 1214, 2004, 2189
BstNSI RCATGY 6 cut(s) 1998, 2002, 2138, 2355, 2421, 2575
BstPI GGTNACC 1 cut(s) 1886
BstSCI CCNGG 2 cut(s) 395, 456
BstSLI GKGCMC 1 cut(s) 1401
BstUI CGCG 1 cut(s) 2843
BstV1I GCAGC 3 cut(s) 773, 1270, 2572
BstX2I RGATCY 1 cut(s) 2649
BstYI RGATCY 1 cut(s) 2649
BsuRI GGCC 5 cut(s) 881, 1457, 1473, 2095, 2150
BtgI CCRYGG 3 cut(s) 820, 831, 1253
BtsCI GGATG 7 cut(s) 380, 1349, 1445, 2166, 2342, 2473, 2837
BtsI GCAGTG 1 cut(s) 1783
BtsIMutI CAGTG 2 cut(s) 1783, 1972
Cac8I GCNNGC 2 cut(s) 1996, 3091
CciI TCATGA 1 cut(s) 3180
CfoI GCGC 4 cut(s) 450, 1451, 2240, 2845
Cfr10I RCCGGY 1 cut(s) 1174
CseI GACGC 1 cut(s) 2569
Csp6I GTAC 4 cut(s) 1024, 1571, 2520, 3129
CspAI ACCGGT 1 cut(s) 1174
CviQI GTAC 4 cut(s) 1024, 1571, 2520, 3129
DdeI CTNAG 7 cut(s) 282, 1329, 1746, 1882, 2591, 2631, 2995
DinI GGCGCC 1 cut(s) 449
DpnI GATC 7 cut(s) 840, 1410, 1494, 1530, 1632, 2056, 2651
DpnII GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
DraIII CACNNNGTG 1 cut(s) 1370
EaeI YGGCCR 2 cut(s) 2093, 2148
Eam1104I CTCTTC 3 cut(s) 971, 1074, 2880
EarI CTCTTC 3 cut(s) 971, 1074, 2880
Eco130I CCWWGG 8 cut(s) 820, 831, 1185, 1253, 1753, 2145, 2800, 2866
Eco147I AGGCCT 1 cut(s) 881
Eco88I CYCGRG 1 cut(s) 715
Eco91I GGTNACC 1 cut(s) 1886
EcoO65I GGTNACC 1 cut(s) 1886
EcoT14I CCWWGG 8 cut(s) 820, 831, 1185, 1253, 1753, 2145, 2800, 2866
EcoT22I ATGCAT 7 cut(s) 31, 746, 2000, 2185, 2357, 2423, 3081
EgeI GGCGCC 1 cut(s) 449
EheI GGCGCC 1 cut(s) 449
ErhI CCWWGG 8 cut(s) 820, 831, 1185, 1253, 1753, 2145, 2800, 2866
FalI AAGNNNNNCTT 8 cut(s) 903, 935, 1098, 1130, 2683, 2715, 2859, 2891
FaqI GGGAC 2 cut(s) 2682, 2782
FbaI TGATCA 2 cut(s) 1408, 1630
Fnu4HI GCNGC 3 cut(s) 762, 1259, 2561
FokI GGATG 7 cut(s) 367, 1356, 1452, 2153, 2329, 2460, 2824
Fsp4HI GCNGC 3 cut(s) 762, 1259, 2561
FspBI CTAG 9 cut(s) 248, 288, 356, 386, 402, 630, 1046, 1136, 2189
GlaI GCGC 4 cut(s) 449, 1450, 2239, 2844
GluI GCNGC 3 cut(s) 762, 1259, 2561
HaeII RGCGCY 1 cut(s) 451
HaeIII GGCC 5 cut(s) 881, 1457, 1473, 2095, 2150
HapII CCGG 3 cut(s) 397, 457, 1175
HgaI GACGC 1 cut(s) 2569
HhaI GCGC 4 cut(s) 450, 1451, 2240, 2845
Hin1I GRCGYC 1 cut(s) 448
Hin6I GCGC 4 cut(s) 448, 1449, 2238, 2843
HinP1I GCGC 4 cut(s) 448, 1449, 2238, 2843
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HpaII CCGG 3 cut(s) 397, 457, 1175
HphI GGTGA 5 cut(s) 126, 1523, 2116, 2694, 3050
Hpy166II GTNNAC 5 cut(s) 1165, 2225, 2584, 2933, 2969
Hpy8I GTNNAC 5 cut(s) 1165, 2225, 2584, 2933, 2969
HpyCH4III ACNGT 2 cut(s) 943, 1976
HpyF10VI GCNNNNNNNGC 5 cut(s) 1154, 1205, 1214, 2004, 2189
HpyF3I CTNAG 7 cut(s) 282, 1329, 1746, 1882, 2591, 2631, 2995
Hsp92I GRCGYC 1 cut(s) 448
HspAI GCGC 4 cut(s) 448, 1449, 2238, 2843
KasI GGCGCC 1 cut(s) 447
Ksp22I TGATCA 2 cut(s) 1408, 1630
Kzo9I GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
LguI GCTCTTC 1 cut(s) 1074
Lsp1109I GCAGC 3 cut(s) 773, 1270, 2572
LweI GCATC 6 cut(s) 389, 811, 941, 1061, 1129, 1334
MaeI CTAG 9 cut(s) 248, 288, 356, 386, 402, 630, 1046, 1136, 2189
MaeIII GTNAC 5 cut(s) 943, 1715, 1886, 2137, 3038
MalI GATC 7 cut(s) 840, 1410, 1494, 1530, 1632, 2056, 2651
MboI GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
MfeI CAATTG 2 cut(s) 1421, 2058
MflI RGATCY 1 cut(s) 2649
MhlI GDGCHC 3 cut(s) 1388, 1401, 1898
Mly113I GGCGCC 1 cut(s) 448
MlyI GAGTC 6 cut(s) 238, 275, 373, 653, 1036, 1104
MmeI TCCRAC 4 cut(s) 765, 1216, 1852, 2492
Mph1103I ATGCAT 7 cut(s) 31, 746, 2000, 2185, 2357, 2423, 3081
MroXI GAANNNNTTC 3 cut(s) 1083, 2713, 2813
MslI CAYNNNNRTG 2 cut(s) 1404, 2354
MspA1I CMGCKG 1 cut(s) 2611
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 3 cut(s) 397, 457, 1175
MspR9I CCNGG 2 cut(s) 397, 458
MunI CAATTG 2 cut(s) 1421, 2058
Mva1269I GAATGC 5 cut(s) 744, 990, 1219, 2209, 2996
MvnI CGCG 1 cut(s) 2843
MwoI GCNNNNNNNGC 5 cut(s) 1154, 1205, 1214, 2004, 2189
NarI GGCGCC 1 cut(s) 448
NciI CCSGG 2 cut(s) 397, 458
NcoI CCATGG 3 cut(s) 820, 831, 1253
NdeII GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
NlaIV GGNNCC 4 cut(s) 449, 940, 1400, 2716
NmeAIII GCCGAG 2 cut(s) 1124, 3119
NmuCI GTSAC 4 cut(s) 943, 1715, 2137, 3038
NsiI ATGCAT 7 cut(s) 31, 746, 2000, 2185, 2357, 2423, 3081
NspI RCATGY 6 cut(s) 1998, 2002, 2138, 2355, 2421, 2575
PaeI GCATGC 1 cut(s) 1998
PagI TCATGA 1 cut(s) 3180
PceI AGGCCT 1 cut(s) 881
PciSI GCTCTTC 1 cut(s) 1074
PctI GAATGC 5 cut(s) 744, 990, 1219, 2209, 2996
PdmI GAANNNNTTC 3 cut(s) 1083, 2713, 2813
PfeI GAWTC 7 cut(s) 650, 964, 2107, 2319, 2359, 2543, 2735
PflMI CCANNNNNTGG 1 cut(s) 2711
PinAI ACCGGT 1 cut(s) 1174
PkrI GCNGC 3 cut(s) 763, 1260, 2562
PleI GAGTC 6 cut(s) 237, 274, 372, 652, 1036, 1104
PluTI GGCGCC 1 cut(s) 451
PpsI GAGTC 6 cut(s) 237, 274, 372, 652, 1036, 1104
PspEI GGTNACC 1 cut(s) 1886
PspN4I GGNNCC 4 cut(s) 449, 940, 1400, 2716
PsrI GAACNNNNNNTAC 2 cut(s) 397, 429
PsuI RGATCY 1 cut(s) 2649
PvuII CAGCTG 1 cut(s) 2611
RsaI GTAC 4 cut(s) 1025, 1572, 2521, 3130
RsaNI GTAC 4 cut(s) 1024, 1571, 2520, 3129
RseI CAYNNNNRTG 2 cut(s) 1404, 2354
SapI GCTCTTC 1 cut(s) 1074
SatI GCNGC 3 cut(s) 762, 1259, 2561
Sau3AI GATC 7 cut(s) 838, 1408, 1492, 1528, 1630, 2054, 2649
SchI GAGTC 6 cut(s) 238, 275, 373, 653, 1036, 1104
ScrFI CCNGG 2 cut(s) 397, 458
SduI GDGCHC 3 cut(s) 1388, 1401, 1898
SfaNI GCATC 6 cut(s) 389, 811, 941, 1061, 1129, 1334
SfoI GGCGCC 1 cut(s) 449
SgrAI CRCCGGYG 1 cut(s) 1174
SmiMI CAYNNNNRTG 2 cut(s) 1404, 2354
SmlI CTYRAG 5 cut(s) 46, 511, 765, 970, 1609
SmoI CTYRAG 5 cut(s) 46, 511, 765, 970, 1609
SphI GCATGC 1 cut(s) 1998
SseBI AGGCCT 1 cut(s) 881
SsiI CCGC 4 cut(s) 683, 1970, 2718, 2841
SspDI GGCGCC 1 cut(s) 447
SspMI CTAG 9 cut(s) 248, 288, 356, 386, 402, 630, 1046, 1136, 2189
StuI AGGCCT 1 cut(s) 881
StyD4I CCNGG 2 cut(s) 395, 456
StyI CCWWGG 8 cut(s) 820, 831, 1185, 1253, 1753, 2145, 2800, 2866
TaaI ACNGT 2 cut(s) 943, 1976
TaqI TCGA 5 cut(s) 691, 841, 855, 1093, 1204
TaqII GACCGA 1 cut(s) 791
TatI WGTACW 2 cut(s) 2519, 3128
TfiI GAWTC 7 cut(s) 650, 964, 2107, 2319, 2359, 2543, 2735
TscAI CASTG 2 cut(s) 1783, 1979
TseFI GTSAC 4 cut(s) 943, 1715, 2137, 3038
TseI GCWGC 3 cut(s) 761, 1258, 2560
Tsp45I GTSAC 4 cut(s) 943, 1715, 2137, 3038
TspGWI ACGGA 1 cut(s) 2301
TspRI CASTG 2 cut(s) 1783, 1979
Van91I CCANNNNNTGG 1 cut(s) 2711
Vha464I CTTAAG 1 cut(s) 511
XapI RAATTY 7 cut(s) 440, 656, 1290, 1537, 2411, 2514, 2642
XbaI TCTAGA 2 cut(s) 355, 401
XceI RCATGY 6 cut(s) 1998, 2002, 2138, 2355, 2421, 2575
XcmI CCANNNNNNNNNTGG 1 cut(s) 1542
XmnI GAANNNNTTC 3 cut(s) 1083, 2713, 2813
XspI CTAG 9 cut(s) 248, 288, 356, 386, 402, 630, 1046, 1136, 2189
Zsp2I ATGCAT 7 cut(s) 31, 746, 2000, 2185, 2357, 2423, 3081
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.