pycom13g27910

Bifunctional protein FolD

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
23982285 .. 23982692
408 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGTTTGATCCTGCAGAGAACAATCGTCTTCCTCTGAGAAAATCGTTCGGTGCATGTCCTTCGAGAGGCCTTATTGTTATTCCCAACATCGATTTTGTCGATTATGCCTATCAATTCAAGTGGTTTATACCATTCATCAAGCTTTGGCGACTTGAAACTTTTCACTCGAGCTTCCAGCCTATGTAA

Protein Analysis

62

Amino Acids

7.3

Weight (kDa)

9.03

Isoelectric Point (pI)

47.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0024276)

Species Orthologous Gene IDs
malus_domestica MD03G1201000.v1.1 MD15G1073100.v1.1
pyrus_communis pycom13g27910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 2
AfiI CCNNNNNNNGG 1 cut(s) 65
AgsI TTSAA 2 cut(s) 118, 155
AluBI AGCT 2 cut(s) 142, 171
AluI AGCT 2 cut(s) 142, 171
AlwI GGATC 1 cut(s) 2
Ama87I CYCGRG 1 cut(s) 166
AoxI GGCC 1 cut(s) 67
Asp700I GAANNNNTTC 1 cut(s) 159
AvaI CYCGRG 1 cut(s) 166
BbsI GAAGAC 1 cut(s) 20
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BfmI CTRYAG 1 cut(s) 12
BmeT110I CYCGRG 1 cut(s) 166
BpiI GAAGAC 1 cut(s) 20
Bsa29I ATCGAT 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 65
BseCI ATCGAT 1 cut(s) 90
BseLI CCNNNNNNNGG 1 cut(s) 65
BseMII CTCAG 1 cut(s) 26
BshFI GGCC 1 cut(s) 69
BshVI ATCGAT 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 166
BslI CCNNNNNNNGG 1 cut(s) 65
BsnI GGCC 1 cut(s) 69
BsoBI CYCGRG 1 cut(s) 166
Bsp143I GATC 1 cut(s) 7
BspANI GGCC 1 cut(s) 69
BspCNI CTCAG 1 cut(s) 27
BspDI ATCGAT 1 cut(s) 90
BspMAI CTGCAG 1 cut(s) 16
BspPI GGATC 1 cut(s) 2
BssMI GATC 1 cut(s) 7
BstDEI CTNAG 1 cut(s) 35
BstENI CCTNNNNNAGG 1 cut(s) 63
BstKTI GATC 1 cut(s) 10
BstMBI GATC 1 cut(s) 7
BstNSI RCATGY 1 cut(s) 57
BstSFI CTRYAG 1 cut(s) 12
BstV2I GAAGAC 1 cut(s) 20
Bsu15I ATCGAT 1 cut(s) 90
BsuRI GGCC 1 cut(s) 69
BsuTUI ATCGAT 1 cut(s) 90
ClaI ATCGAT 1 cut(s) 90
CspCI CAANNNNNGTGG 2 cut(s) 101, 136
CviAII CATG 1 cut(s) 54
CviJI RGCY 4 cut(s) 69, 142, 171, 178
CviKI_1 RGCY 4 cut(s) 69, 142, 171, 178
DdeI CTNAG 1 cut(s) 35
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
Eco147I AGGCCT 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 166
EcoNI CCTNNNNNAGG 1 cut(s) 63
FaeI CATG 1 cut(s) 57
FaiI YATR 4 cut(s) 55, 105, 128, 182
FatI CATG 1 cut(s) 53
HaeIII GGCC 1 cut(s) 69
Hin1II CATG 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 140
Hpy188I TCNGA 1 cut(s) 36
Hpy188III TCNNGA 1 cut(s) 63
HpyAV CCTTC 1 cut(s) 69
HpyCH4V TGCA 2 cut(s) 14, 53
HpyF3I CTNAG 1 cut(s) 35
Hsp92II CATG 1 cut(s) 57
Kzo9I GATC 1 cut(s) 7
LpnPI CCDG 1 cut(s) 24
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MboII GAAGA 1 cut(s) 20
MluCI AATT 1 cut(s) 113
MnlI CCTC 2 cut(s) 42, 59
MroXI GAANNNNTTC 1 cut(s) 159
NdeII GATC 1 cut(s) 7
NlaIII CATG 1 cut(s) 57
NspI RCATGY 1 cut(s) 57
PaeR7I CTCGAG 1 cut(s) 166
PceI AGGCCT 1 cut(s) 69
PcsI WCGNNNNNNNCGW 1 cut(s) 96
PdmI GAANNNNTTC 1 cut(s) 159
PspXI VCTCGAGB 1 cut(s) 166
PstI CTGCAG 1 cut(s) 16
Sau3AI GATC 1 cut(s) 7
SetI ASST 2 cut(s) 144, 173
SfcI CTRYAG 1 cut(s) 12
Sfr274I CTCGAG 1 cut(s) 166
SgeI CNNG 8 cut(s) 23, 66, 75, 130, 151, 164, 178, 180
SlaI CTCGAG 1 cut(s) 166
SmlI CTYRAG 1 cut(s) 166
SmoI CTYRAG 1 cut(s) 166
Sse9I AATT 1 cut(s) 113
SseBI AGGCCT 1 cut(s) 69
StuI AGGCCT 1 cut(s) 69
TaqI TCGA 4 cut(s) 62, 90, 99, 167
TasI AATT 1 cut(s) 113
TspDTI ATGAA 1 cut(s) 124
XagI CCTNNNNNAGG 1 cut(s) 63
XceI RCATGY 1 cut(s) 57
XhoI CTCGAG 1 cut(s) 166
XmnI GAANNNNTTC 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.