pycom14g14160

Quinolinate synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
16968294 .. 16972028
3735 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 312 bp
ATGGCGGTGTTACTGCGTACGGTCGGTACGTCGATCCTTGCAAGTGCGTTTGCAGCGGGTATATGTGATCTCGTCATCTTTGCTAGATCAGTAAAATCATCTGATGCCAAAGTAAAGCCAATTCCTCGACAAGGAAACGATAGTGGGACATGGATAGCTCGAATTGAGGCTTTTGTTCAAGTGCCAGATGCAAATATATGGTACGGGCCTGATTCCAACATGGGTGCAAATATTAGAGAATTACTCCAGCAGATGACTAAGATGACTGATGAAGCAATTGCTGAGATACATCCAGAACATAATAGAGACTGA

Protein Analysis

104

Amino Acids

11.25

Weight (kDa)

5.59

Isoelectric Point (pI)

44.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020428)

Species Orthologous Gene IDs
pyrus_communis pycom01g12280 pycom10g03800 pycom13g24390 pycom14g14160
rosa_chinensis RchiOBHm_Chr5g0014091
rosa_samantha Rh5CG118100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 56
AclWI GGATC 1 cut(s) 28
AfaI GTAC 3 cut(s) 19, 28, 203
AfiI CCNNNNNNNGG 1 cut(s) 131
AgsI TTSAA 1 cut(s) 179
AluBI AGCT 1 cut(s) 158
AluI AGCT 1 cut(s) 158
Alw26I GTCTC 1 cut(s) 300
AlwI GGATC 1 cut(s) 28
AoxI GGCC 1 cut(s) 206
ApeKI GCWGC 1 cut(s) 53
AspS9I GGNCC 1 cut(s) 206
BbvI GCAGC 1 cut(s) 65
BcoDI GTCTC 1 cut(s) 300
BfaI CTAG 1 cut(s) 84
BisI GCNGC 1 cut(s) 54
BlsI GCNGC 1 cut(s) 55
BmgT120I GGNCC 1 cut(s) 206
BmsI GCATC 2 cut(s) 94, 178
BplI GAGNNNNNCTC 2 cut(s) 228, 260
BpmI CTGGAG 1 cut(s) 230
Bsc4I CCNNNNNNNGG 1 cut(s) 131
BseGI GGATG 1 cut(s) 289
BseLI CCNNNNNNNGG 1 cut(s) 131
BseMII CTCAG 1 cut(s) 273
BseXI GCAGC 1 cut(s) 65
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 1 cut(s) 208
BsiEI CGRYCG 1 cut(s) 24
BsiWI CGTACG 1 cut(s) 17
BslFI GGGAC 1 cut(s) 160
BslI CCNNNNNNNGG 1 cut(s) 131
BsmAI GTCTC 1 cut(s) 300
BsmFI GGGAC 1 cut(s) 160
BsnI GGCC 1 cut(s) 208
Bsp143I GATC 3 cut(s) 33, 67, 86
BspACI CCGC 2 cut(s) 5, 56
BspANI GGCC 1 cut(s) 208
BspCNI CTCAG 1 cut(s) 274
BspPI GGATC 1 cut(s) 28
BssMI GATC 3 cut(s) 33, 67, 86
Bst4CI ACNGT 1 cut(s) 22
BstDEI CTNAG 2 cut(s) 258, 282
BstENI CCTNNNNNAGG 1 cut(s) 129
BstF5I GGATG 1 cut(s) 289
BstKTI GATC 3 cut(s) 36, 70, 89
BstMAI GTCTC 1 cut(s) 300
BstMBI GATC 3 cut(s) 33, 67, 86
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstV1I GCAGC 1 cut(s) 65
BsuRI GGCC 1 cut(s) 208
BtsCI GGATG 1 cut(s) 289
Cfr13I GGNCC 1 cut(s) 206
Csp6I GTAC 3 cut(s) 18, 27, 202
CviAII CATG 2 cut(s) 150, 220
CviJI RGCY 4 cut(s) 118, 158, 170, 208
CviKI_1 RGCY 4 cut(s) 118, 158, 170, 208
CviQI GTAC 3 cut(s) 18, 27, 202
DdeI CTNAG 2 cut(s) 258, 282
DpnI GATC 3 cut(s) 35, 69, 88
DpnII GATC 3 cut(s) 33, 67, 86
EcoNI CCTNNNNNAGG 1 cut(s) 129
FaeI CATG 2 cut(s) 153, 223
FaiI YATR 7 cut(s) 62, 64, 151, 197, 199, 221, 300
FaqI GGGAC 1 cut(s) 160
FatI CATG 2 cut(s) 149, 219
FauI CCCGC 1 cut(s) 49
Fnu4HI GCNGC 1 cut(s) 54
FokI GGATG 1 cut(s) 276
Fsp4HI GCNGC 1 cut(s) 54
FspBI CTAG 1 cut(s) 84
GluI GCNGC 1 cut(s) 54
GsuI CTGGAG 1 cut(s) 230
HaeIII GGCC 1 cut(s) 208
Hin1II CATG 2 cut(s) 153, 223
HinfI GANTC 1 cut(s) 212
Hpy188I TCNGA 1 cut(s) 103
Hpy188III TCNNGA 1 cut(s) 293
Hpy99I CGWCG 1 cut(s) 34
HpyCH4III ACNGT 1 cut(s) 22
HpyCH4IV ACGT 1 cut(s) 29
HpyCH4V TGCA 4 cut(s) 41, 53, 191, 227
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 2 cut(s) 258, 282
HpySE526I ACGT 1 cut(s) 29
Hsp92II CATG 2 cut(s) 153, 223
Kzo9I GATC 3 cut(s) 33, 67, 86
LpnPI CCDG 4 cut(s) 198, 222, 260, 306
Lsp1109I GCAGC 1 cut(s) 65
LweI GCATC 2 cut(s) 94, 178
MaeI CTAG 1 cut(s) 84
MaeII ACGT 1 cut(s) 29
MaeIII GTNAC 1 cut(s) 9
MalI GATC 3 cut(s) 35, 69, 88
MboI GATC 3 cut(s) 33, 67, 86
MfeI CAATTG 1 cut(s) 276
MluCI AATT 4 cut(s) 120, 162, 239, 276
MmeI TCCRAC 1 cut(s) 240
MnlI CCTC 2 cut(s) 135, 160
MspA1I CMGCKG 1 cut(s) 56
MunI CAATTG 1 cut(s) 276
MwoI GCNNNNNNNGC 1 cut(s) 53
NdeII GATC 3 cut(s) 33, 67, 86
NlaIII CATG 2 cut(s) 153, 223
PcsI WCGNNNNNNNCGW 1 cut(s) 26
PfeI GAWTC 1 cut(s) 212
Pfl23II CGTACG 1 cut(s) 17
PkrI GCNGC 1 cut(s) 55
PspLI CGTACG 1 cut(s) 17
PspPI GGNCC 1 cut(s) 206
RsaI GTAC 3 cut(s) 19, 28, 203
RsaNI GTAC 3 cut(s) 18, 27, 202
SatI GCNGC 1 cut(s) 54
Sau3AI GATC 3 cut(s) 33, 67, 86
Sau96I GGNCC 1 cut(s) 206
SetI ASST 2 cut(s) 32, 160
SfaNI GCATC 2 cut(s) 94, 178
Sse9I AATT 4 cut(s) 120, 162, 239, 276
SsiI CCGC 2 cut(s) 5, 56
SspI AATATT 1 cut(s) 232
SspMI CTAG 1 cut(s) 84
TaaI ACNGT 1 cut(s) 22
TaiI ACGT 1 cut(s) 32
TaqI TCGA 3 cut(s) 32, 127, 160
TasI AATT 4 cut(s) 120, 162, 239, 276
TfiI GAWTC 1 cut(s) 212
TseI GCWGC 1 cut(s) 53
TspDTI ATGAA 1 cut(s) 285
XagI CCTNNNNNAGG 1 cut(s) 129
XspI CTAG 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.