pycom14g14290

Protein DEHYDRATION-INDUCED 19 homolog 5-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
17028087 .. 17031718
3632 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 627 bp
ATGGACGTTGACTTGTGGGCTTGCAGGGTTCATGCAGCTAAGAGCCTCTCTGCTGCTCATGCTGCAAGGCTTCACTATGATAATCATATGGGTTTGGAAGATTCTGAAGGAGATGACGACACAAAATCGTGTTTTCCATGCCCTTTCTGTTATGTGGATATTGAAGTCCCAGTGCTTTGCAGCCACTTGGAGGAAGAACACTGCTTTGACGTTAAAAATGCAGTTTGTCCTTTGTGTGCTGCGAATCTGGGGAAAGATGTAATTGGACATTTTATGGTGCACCATGGAAGCTCCTTCAAGCACAGGAGAAAATCTCAAAAATCCGGTTTGTGGACTGGTAGTTCAGCAATGCTGGGGAAGGCAATGCTTAAACATGGAAGGACATATGCACAGGAAACTGCACCTGATCCTCTCCTCTCACCATTTATCTGCAATATATCATTTTCAGACCCTACAGGTATTCCAGAAGATCTTTGTTCGGATATGGATTCCCCTATCACTTCCGGCATGAAAAGCGCCGATCCATCTCCCCCAGATGAAGCTTGTGAAAAGGATAAAGAAGAGAGAAGGCAGAGGGCGGCATTCGTGCAAGGGCTGATTGCATCAACCATATTCTTGGACATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

209

Amino Acids

22.83

Weight (kDa)

5.37

Isoelectric Point (pI)

51.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-Di19 PF05605 44 - 96 1.2e-18 Drought induced 19 protein (Di19), zinc-binding
Di19_C PF14571 123 - 204 5.6e-14 Stress-induced protein Di19, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017301)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g06340
malus_domestica MD06G1165500.v1.1 MD14G1171000.v1.1
prunus_persica Prupe.5G165100_v2.0.a1
pyrus_communis pycom06g14790 pycom14g14290
rosa_chinensis RchiOBHm_Chr7g0192501
rosa_laevigata RLG00000004360
rosa_multiflora Rmu_sc0003108.1_g000030
rosa_roxburghii Rroxscaffold_3G00262970
rosa_rugosa Rorug07G0001800
rosa_samantha Rh7AG126000
rosa_wichuraiana Rw7G010850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 578
AclWI GGATC 2 cut(s) 401, 515
AcuI CTGAAG 1 cut(s) 126
AfiI CCNNNNNNNGG 2 cut(s) 190, 330
AgsI TTSAA 2 cut(s) 164, 298
AloI GAACNNNNNNTCC 2 cut(s) 325, 357
AluBI AGCT 3 cut(s) 38, 291, 542
AluI AGCT 3 cut(s) 38, 291, 542
Alw21I GWGCWC 1 cut(s) 282
Alw44I GTGCAC 1 cut(s) 278
AlwI GGATC 2 cut(s) 401, 515
ApaLI GTGCAC 1 cut(s) 278
ApeKI GCWGC 5 cut(s) 35, 53, 62, 180, 239
AspLEI GCGC 1 cut(s) 518
AsuHPI GGTGA 1 cut(s) 411
BaeGI GKGCMC 1 cut(s) 282
Bbv12I GWGCWC 1 cut(s) 282
BbvI GCAGC 5 cut(s) 40, 47, 49, 192, 226
BccI CCATC 1 cut(s) 532
BfmI CTRYAG 1 cut(s) 453
BfoI RGCGCY 1 cut(s) 519
BglII AGATCT 1 cut(s) 469
BisI GCNGC 6 cut(s) 36, 54, 63, 181, 240, 579
BlsI GCNGC 6 cut(s) 37, 55, 64, 182, 241, 580
BmrI ACTGGG 1 cut(s) 164
BmsI GCATC 1 cut(s) 611
BmuI ACTGGG 1 cut(s) 164
BplI GAGNNNNNCTC 2 cut(s) 298, 330
BsaJI CCNNGG 1 cut(s) 283
BsaWI WCCGGW 1 cut(s) 323
Bsc4I CCNNNNNNNGG 2 cut(s) 190, 330
Bse1I ACTGG 2 cut(s) 170, 340
Bse3DI GCAATG 2 cut(s) 354, 369
BseDI CCNNGG 1 cut(s) 283
BseLI CCNNNNNNNGG 2 cut(s) 190, 330
BseMI GCAATG 2 cut(s) 354, 369
BseNI ACTGG 2 cut(s) 170, 340
BseRI GAGGAG 1 cut(s) 404
BseSI GKGCMC 1 cut(s) 282
BseXI GCAGC 5 cut(s) 40, 47, 49, 192, 226
BseYI CCCAGC 1 cut(s) 352
BsgI GTGCAG 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 282
BsiSI CCGG 2 cut(s) 324, 504
BslFI GGGAC 1 cut(s) 152
BslI CCNNNNNNNGG 2 cut(s) 190, 330
BsmFI GGGAC 1 cut(s) 152
BsmI GAATGC 1 cut(s) 581
Bsp1286I GDGCHC 1 cut(s) 282
Bsp143I GATC 3 cut(s) 406, 469, 520
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 1 cut(s) 578
BspPI GGATC 2 cut(s) 401, 515
BsrDI GCAATG 2 cut(s) 354, 369
BsrI ACTGG 2 cut(s) 170, 340
BssECI CCNNGG 1 cut(s) 283
BssMI GATC 3 cut(s) 406, 469, 520
BssT1I CCWWGG 1 cut(s) 283
Bst6I CTCTTC 1 cut(s) 555
BstC8I GCNNGC 1 cut(s) 22
BstDEI CTNAG 1 cut(s) 39
BstDSI CCRYGG 1 cut(s) 283
BstH2I RGCGCY 1 cut(s) 519
BstHHI GCGC 1 cut(s) 518
BstKTI GATC 3 cut(s) 409, 472, 523
BstMBI GATC 3 cut(s) 406, 469, 520
BstMWI GCNNNNNNNGC 3 cut(s) 59, 62, 513
BstSFI CTRYAG 1 cut(s) 453
BstSLI GKGCMC 1 cut(s) 282
BstV1I GCAGC 5 cut(s) 40, 47, 49, 192, 226
BstX2I RGATCY 1 cut(s) 469
BstXI CCANNNNNNTGG 1 cut(s) 616
BstYI RGATCY 1 cut(s) 469
BtgI CCRYGG 1 cut(s) 283
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 2 cut(s) 177, 199
Cac8I GCNNGC 1 cut(s) 22
CfoI GCGC 1 cut(s) 518
CviAII CATG 6 cut(s) 32, 59, 138, 284, 374, 508
CviJI RGCY 8 cut(s) 20, 38, 45, 70, 183, 291, 542, 595
CviKI_1 RGCY 8 cut(s) 20, 38, 45, 70, 183, 291, 542, 595
DdeI CTNAG 1 cut(s) 39
DpnI GATC 3 cut(s) 408, 471, 522
DpnII GATC 3 cut(s) 406, 469, 520
Eam1104I CTCTTC 1 cut(s) 555
EarI CTCTTC 1 cut(s) 555
Eco130I CCWWGG 1 cut(s) 283
Eco57I CTGAAG 1 cut(s) 126
EcoT14I CCWWGG 1 cut(s) 283
ErhI CCWWGG 1 cut(s) 283
FaeI CATG 6 cut(s) 35, 62, 141, 287, 377, 511
FaqI GGGAC 1 cut(s) 152
FatI CATG 6 cut(s) 31, 58, 137, 283, 373, 507
FauNDI CATATG 3 cut(s) 87, 385, 623
Fnu4HI GCNGC 6 cut(s) 36, 54, 63, 181, 240, 579
Fsp4HI GCNGC 6 cut(s) 36, 54, 63, 181, 240, 579
GlaI GCGC 1 cut(s) 517
GluI GCNGC 6 cut(s) 36, 54, 63, 181, 240, 579
GsaI CCCAGC 1 cut(s) 356
HaeII RGCGCY 1 cut(s) 519
HapII CCGG 2 cut(s) 324, 504
HhaI GCGC 1 cut(s) 518
Hin1II CATG 6 cut(s) 35, 62, 141, 287, 377, 511
Hin6I GCGC 1 cut(s) 516
HinP1I GCGC 1 cut(s) 516
HincII GTYRAC 1 cut(s) 10
HindII GTYRAC 1 cut(s) 10
HindIII AAGCTT 1 cut(s) 540
HinfI GANTC 3 cut(s) 101, 244, 488
HpaII CCGG 2 cut(s) 324, 504
HphI GGTGA 1 cut(s) 411
Hpy166II GTNNAC 3 cut(s) 10, 280, 333
Hpy188I TCNGA 3 cut(s) 106, 448, 481
Hpy188III TCNNGA 1 cut(s) 464
Hpy8I GTNNAC 3 cut(s) 10, 280, 333
HpyAV CCTTC 5 cut(s) 101, 304, 352, 372, 561
HpyCH4IV ACGT 2 cut(s) 6, 210
HpyF10VI GCNNNNNNNGC 3 cut(s) 59, 62, 513
HpyF3I CTNAG 1 cut(s) 39
HpySE526I ACGT 2 cut(s) 6, 210
Hsp92II CATG 6 cut(s) 35, 62, 141, 287, 377, 511
HspAI GCGC 1 cut(s) 516
Kzo9I GATC 3 cut(s) 406, 469, 520
LmnI GCTCC 1 cut(s) 296
Lsp1109I GCAGC 5 cut(s) 40, 47, 49, 192, 226
LweI GCATC 1 cut(s) 611
MaeII ACGT 2 cut(s) 6, 210
MalI GATC 3 cut(s) 408, 471, 522
MboI GATC 3 cut(s) 406, 469, 520
MboII GAAGA 4 cut(s) 110, 206, 479, 572
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 1 cut(s) 282
MluCI AATT 1 cut(s) 261
MnlI CCTC 5 cut(s) 56, 184, 420, 425, 567
MseI TTAA 2 cut(s) 213, 369
MspI CCGG 2 cut(s) 324, 504
Mva1269I GAATGC 1 cut(s) 581
MwoI GCNNNNNNNGC 3 cut(s) 59, 62, 513
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 3 cut(s) 87, 385, 623
NdeII GATC 3 cut(s) 406, 469, 520
NlaIII CATG 6 cut(s) 35, 62, 141, 287, 377, 511
PctI GAATGC 1 cut(s) 581
PfeI GAWTC 3 cut(s) 101, 244, 488
PkrI GCNGC 6 cut(s) 37, 55, 64, 182, 241, 580
PspFI CCCAGC 1 cut(s) 352
PsuI RGATCY 1 cut(s) 469
SaqAI TTAA 2 cut(s) 213, 369
SatI GCNGC 6 cut(s) 36, 54, 63, 181, 240, 579
Sau3AI GATC 3 cut(s) 406, 469, 520
SduI GDGCHC 1 cut(s) 282
SetI ASST 7 cut(s) 9, 40, 213, 293, 406, 460, 544
SfaNI GCATC 1 cut(s) 611
SfcI CTRYAG 1 cut(s) 453
Sse9I AATT 1 cut(s) 261
SsiI CCGC 1 cut(s) 578
StyI CCWWGG 1 cut(s) 283
TaiI ACGT 2 cut(s) 9, 213
TasI AATT 1 cut(s) 261
TauI GCSGC 1 cut(s) 581
TfiI GAWTC 3 cut(s) 101, 244, 488
Tru1I TTAA 2 cut(s) 213, 369
Tru9I TTAA 2 cut(s) 213, 369
TscAI CASTG 2 cut(s) 177, 206
TseI GCWGC 5 cut(s) 35, 53, 62, 180, 239
TspDTI ATGAA 3 cut(s) 20, 524, 552
TspRI CASTG 2 cut(s) 177, 206
VneI GTGCAC 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.