pycom14g20260

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
21328120 .. 21329137
1018 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g20260.3

Sequence Viewer

Length: 417 bp
ATGAGCTTTTGGGGTAAAAGGAGTCATCTACTTCTAGGATTTCGGGGCTATATTTGTGCGTTCGTCCAAGGATTTGCATGTTGTTCCATCGCATCAAAGAGGGCTTCTTTAAGCTTGGGTTTCTTGGCAGTGGCTTTCTCCATTGACCTCTACACCTGCGTCTCTCCTCGCTTTCCCACTTCCTCCGATTCGGTGAGTTTGATTTGGGTTTGTGAATGTCTTCCTGGCTTTTCCACTTCGGATTCACATAATAAGTTCAATGGTTGTAAACAGAACAGAATACTGACTTGCGAACAAGGCAATTCAAAGCTTGAAAATTTGTATGTTATGCATGAGCTGACTAATATTTTTTTGTGCACTTTATTCATGCCTGTTGTGGATAATAGCTTGAAAATTTGTATGTATTGCATGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

139

Amino Acids

15.41

Weight (kDa)

8.31

Isoelectric Point (pI)

60.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024366)

Species Orthologous Gene IDs
malus_domestica MD02G1203400.v1.1
pyrus_communis pycom06g09800 pycom14g20260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 164
Acc36I ACCTGC 1 cut(s) 164
AcsI RAATTY 2 cut(s) 316, 393
AgsI TTSAA 4 cut(s) 259, 306, 314, 391
AjnI CCWGG 1 cut(s) 223
AluBI AGCT 5 cut(s) 6, 114, 310, 337, 387
AluI AGCT 5 cut(s) 6, 114, 310, 337, 387
Alw21I GWGCWC 1 cut(s) 359
Alw26I GTCTC 1 cut(s) 166
Alw44I GTGCAC 1 cut(s) 355
ApaLI GTGCAC 1 cut(s) 355
ApoI RAATTY 2 cut(s) 316, 393
Asp700I GAANNNNTTC 1 cut(s) 219
AsuHPI GGTGA 1 cut(s) 205
BaeGI GKGCMC 1 cut(s) 359
BbsI GAAGAC 1 cut(s) 212
Bbv12I GWGCWC 1 cut(s) 359
BccI CCATC 1 cut(s) 95
BciT130I CCWGG 1 cut(s) 225
BcoDI GTCTC 1 cut(s) 166
BfaI CTAG 1 cut(s) 35
BfuAI ACCTGC 1 cut(s) 164
Bme1390I CCNGG 1 cut(s) 225
BmrFI CCNGG 1 cut(s) 225
BmsI GCATC 1 cut(s) 101
BpiI GAAGAC 1 cut(s) 212
BsaJI CCNNGG 1 cut(s) 67
BseBI CCWGG 1 cut(s) 225
BseDI CCNNGG 1 cut(s) 67
BseRI GAGGAG 1 cut(s) 156
BseSI GKGCMC 1 cut(s) 359
BsiHKAI GWGCWC 1 cut(s) 359
BsmAI GTCTC 1 cut(s) 166
BsmBI CGTCTC 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 359
BspMI ACCTGC 1 cut(s) 164
BssECI CCNNGG 1 cut(s) 67
BssT1I CCWWGG 1 cut(s) 67
Bst2UI CCWGG 1 cut(s) 225
BstMAI GTCTC 1 cut(s) 166
BstMWI GCNNNNNNNGC 1 cut(s) 297
BstNI CCWGG 1 cut(s) 225
BstNSI RCATGY 1 cut(s) 81
BstSCI CCNGG 1 cut(s) 223
BstSLI GKGCMC 1 cut(s) 359
BstV2I GAAGAC 1 cut(s) 212
BtgZI GCGATG 1 cut(s) 73
BtsI GCAGTG 1 cut(s) 135
BtsIMutI CAGTG 1 cut(s) 135
BveI ACCTGC 1 cut(s) 164
CseI GACGC 1 cut(s) 148
CviAII CATG 4 cut(s) 78, 332, 367, 409
CviJI RGCY 9 cut(s) 6, 48, 104, 114, 134, 228, 310, 337, 387
CviKI_1 RGCY 9 cut(s) 6, 48, 104, 114, 134, 228, 310, 337, 387
Eco130I CCWWGG 1 cut(s) 67
EcoRII CCWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 67
EcoT22I ATGCAT 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 67
Esp3I CGTCTC 1 cut(s) 166
FaeI CATG 4 cut(s) 81, 335, 370, 412
FaiI YATR 9 cut(s) 51, 79, 249, 324, 329, 333, 368, 401, 410
FatI CATG 4 cut(s) 77, 331, 366, 408
FspBI CTAG 1 cut(s) 35
HgaI GACGC 1 cut(s) 148
Hin1II CATG 4 cut(s) 81, 335, 370, 412
HindIII AAGCTT 2 cut(s) 112, 308
HinfI GANTC 3 cut(s) 22, 188, 242
HphI GGTGA 1 cut(s) 205
Hpy166II GTNNAC 2 cut(s) 269, 357
Hpy188I TCNGA 2 cut(s) 187, 241
Hpy8I GTNNAC 2 cut(s) 269, 357
HpyCH4V TGCA 4 cut(s) 77, 331, 357, 408
HpyF10VI GCNNNNNNNGC 1 cut(s) 297
Hsp92II CATG 4 cut(s) 81, 335, 370, 412
LpnPI CCDG 4 cut(s) 169, 210, 237, 384
LweI GCATC 1 cut(s) 101
MaeI CTAG 1 cut(s) 35
MboII GAAGA 1 cut(s) 212
MhlI GDGCHC 1 cut(s) 359
MluCI AATT 3 cut(s) 301, 316, 393
MlyI GAGTC 1 cut(s) 31
MnlI CCTC 4 cut(s) 93, 158, 177, 193
Mph1103I ATGCAT 1 cut(s) 333
MroXI GAANNNNTTC 1 cut(s) 219
MseI TTAA 1 cut(s) 110
MspR9I CCNGG 1 cut(s) 225
MvaI CCWGG 1 cut(s) 225
MwoI GCNNNNNNNGC 1 cut(s) 297
NlaIII CATG 4 cut(s) 81, 335, 370, 412
NsiI ATGCAT 1 cut(s) 333
NspI RCATGY 1 cut(s) 81
PaqCI CACCTGC 1 cut(s) 164
PdmI GAANNNNTTC 1 cut(s) 219
PfeI GAWTC 2 cut(s) 188, 242
PleI GAGTC 1 cut(s) 30
PpsI GAGTC 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 223
PspGI CCWGG 1 cut(s) 223
SaqAI TTAA 1 cut(s) 110
SchI GAGTC 1 cut(s) 31
ScrFI CCNGG 1 cut(s) 225
SduI GDGCHC 1 cut(s) 359
SetI ASST 7 cut(s) 8, 116, 150, 158, 312, 339, 389
SfaNI GCATC 1 cut(s) 101
Sse9I AATT 3 cut(s) 301, 316, 393
SspI AATATT 1 cut(s) 346
SspMI CTAG 1 cut(s) 35
StyD4I CCNGG 1 cut(s) 223
StyI CCWWGG 1 cut(s) 67
TasI AATT 3 cut(s) 301, 316, 393
TfiI GAWTC 2 cut(s) 188, 242
Tru1I TTAA 1 cut(s) 110
Tru9I TTAA 1 cut(s) 110
TscAI CASTG 1 cut(s) 135
TspDTI ATGAA 1 cut(s) 355
TspRI CASTG 1 cut(s) 135
VneI GTGCAC 1 cut(s) 355
XapI RAATTY 2 cut(s) 316, 393
XceI RCATGY 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 219
XspI CTAG 1 cut(s) 35
Zsp2I ATGCAT 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.