Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0012584

Physical Location & Seq

Genomic Coordinates Reverse (-)

985074 .. 988915

Gene Structure 3842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGCATGTATTTGGTAATGGACTGGGGTTAGAAACTATAAGTCCCGCCAGCCCTCGGCTTCGTCCGTTGGACCGTTTGTCTCCCTCGCTCCCTCCCTCACTCGAGCTGCTTCTCCATTCGGATATGGCGTCTCTCATCTCCCCGCCACCGTCAACTTCCTACCTCTTCCGCCACAAATCCTCCTTCTACGGCACCGTTTTCCCCCAAAGGTGTGAGCAGGACTCGAACAAGTCCAAAAATGTCAGATTCTTATCAGTCAGCTGCCGAATTAGCACCAGAGCCAAGGAGTTATCTTCTGCTCAAAAACCCAATACTTTAATCAAGGAACCTCACAAGTACTTTGATCAGGTGATCATCACCGTTCGTTCCGGCGACGGAGGCCACGGCGCGGTCCTCGCCATGCCGAACCAGAGACCTCCCAGCAAGCCGCCGCAGGGGAAGCATGAGAAGGAGAAGCTGAGGAGGAAGAGCTTGCTGAAAAGGGATTTTGGTGGGGCCCTTGTTCTTCCTGTGGGTGGCCATGGAGGTGATGTTGTGATTTATGCTGATGAGGGTAAAGATTCGTTGTTGGAATTTCACGCGAAAAGCCGGTTCAATGCAAAACGCGGTGGAAATGTGGCTGCAATGGGGGTCTTGACATCCCAGTTGCACGATGGACTTTCTGCTCCGGCTCTGCGTATTCCTGTGCCGCCGGGTACGGTAGTGAAGCGTAAGCGAGGAACCTTGTTGGCTGATCTAGCACGGCCAGGGGACGAAATTCTTGTAGCGAGGGGCGGACAAGGAGGGATTAGCTTGGTAGAAACGCCGGAGCGTAGCAAGAAAAAGGTGATGGCTTTGACCACAAATGTGATGAGAGATGATAGTGATAAGGTTTTAGCTGTTGGTCAACCAGGAGAGGACGTTAGTTTGGAGTTGATCTTACGAGTTGTTGCTGACGTTGGTTTGGTTGGCCTTCCAAATGCTGGAAAATCAACCCTTTTGGCCGCCACTACACTTGCAAGACCTGATATTGCTGATTATCCTTTCACAACCTTAATGCCAAACCTTGGACGCCTTGATGGTGACCCAAGTTTAGGGCCAGGGATGTATTCTTCTGAAGCAACTTTGGCAGATTTGCCTGGTCTTATTGAAGGTGCTCATCTTGGGAAGGGTCTTGGTCGCAATTTCTTGAGGCATCTGAGGCGGACTCGGCTATTGGTCCATGTTGTTGATGCAGCAGCTGAGGATCCTGTGAATGACTACAGAACTGTCAAGGAAGAATTGCGAATGTATAATCCTGATTACCTTGATCGACCATATATAGTGGTGTTGAATAAAATTGACCTTCCCCAGGCAAAGGACAGGCTTCCATCTCTGACGGAAGAAATAATGAGGCTTGGTTGTGATACAGCATCCTCTGAGCCAGAAACGAGCACTGCAGGTGCAGTTAAACGGCCGGACCCTGAAGGTGAGAATGCCGATGTAAGTTCATCAAAAGCTCCGACCAAAGACAGAAAGGATAAAGATATTGAGGACTATCCACGACCCCTTGCTATTGTAGGAGTTAGTGTATTGAAAGGCATCAGAGTAAACGAAATGTTGAAGGCGATAAGGGCAGGTCTGCGAAAGTGCCGAGGCATAAACGAAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GTP1_OBG MMR_HSR1

Protein Analysis

544

Amino Acids

58.78

Weight (kDa)

9.39

Isoelectric Point (pI)

47.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP1_OBG	PF01018	172 - 267	8.2e-17	GTP1/OBG
MMR_HSR1	PF01926	312 - 439	1.8e-22	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012584)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g38870 FvH4_2g38870 FvH4_2g38870 FvH4_2g38870
malus_domestica	MD08G1022900.v1.1 MD15G1020600.v1.1
prunus_persica	Prupe.1G372200_v2.0.a1
pyrus_communis	pycom15g01690
rosa_chinensis	RchiOBHm_Chr6g0301971
rosa_laevigata	RLG00000011208
rosa_multiflora	Rmu_sc0006892.1_g000002 Rmu_sc0019189.1_g000003
rosa_roxburghii	Rroxscaffold_7G00166230
rosa_rugosa	Rorug06G0310700 Rorug06G0310700
rosa_samantha	Rh6BG429900 Rh6CG436300 Rh6DG423300
rosa_wichuraiana	Rw6G036660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1409
Acc36I	ACCTGC	2 cut(s)	1409, 1586
AccB1I	GGYRCC	1 cut(s)	191
AccB7I	CCANNNNNTGG	2 cut(s)	962, 1046
AccII	CGCG	3 cut(s)	389, 581, 606
AclWI	GGATC	2 cut(s)	1220, 1233
AcoI	YGGCCR	4 cut(s)	517, 743, 981, 1433
AcsI	RAATTY	2 cut(s)	572, 756
AcuI	CTGAAG	2 cut(s)	1116, 1464
AcyI	GRCGYC	2 cut(s)	128, 1051
AfaI	GTAC	2 cut(s)	338, 697
AfiI	CCNNNNNNNGG	9 cut(s)	54, 388, 434, 515, 962, 1046, 1073, 1330, 1336
AgsI	TTSAA	5 cut(s)	595, 1130, 1312, 1555, 1582
AhdI	GACNNNNNGTC	1 cut(s)	76
AjnI	CCWGG	5 cut(s)	745, 889, 1078, 1117, 1329
AleI	CACNNNNGTG	1 cut(s)	845
AluBI	AGCT	8 cut(s)	106, 261, 457, 471, 792, 878, 1220, 1478
AluI	AGCT	8 cut(s)	106, 261, 457, 471, 792, 878, 1220, 1478
Alw21I	GWGCWC	2 cut(s)	1138, 1415
Alw26I	GTCTC	3 cut(s)	84, 135, 406
AlwI	GGATC	2 cut(s)	1220, 1233
AlwNI	CAGNNNCTG	1 cut(s)	1220
Ama87I	CYCGRG	1 cut(s)	101
AoxI	GGCC	8 cut(s)	379, 495, 517, 743, 949, 981, 1076, 1433
ApaI	GGGCCC	1 cut(s)	499
ApeKI	GCWGC	5 cut(s)	106, 261, 620, 1214, 1217
ApoI	RAATTY	2 cut(s)	572, 756
AspLEI	GCGC	1 cut(s)	389
AspS9I	GGNCC	7 cut(s)	70, 391, 495, 496, 1076, 1198, 1438
AsuC2I	CCSGG	1 cut(s)	693
AsuHPI	GGTGA	6 cut(s)	349, 361, 539, 838, 1073, 1460
AvaI	CYCGRG	1 cut(s)	101
AvaII	GGWCC	4 cut(s)	70, 391, 1198, 1438
BaeGI	GKGCMC	1 cut(s)	499
BaeI	ACNNNNGTAYC	2 cut(s)	687, 720
BalI	TGGCCA	1 cut(s)	519
BamHI	GGATCC	1 cut(s)	1225
BanI	GGYRCC	1 cut(s)	191
BanII	GRGCYC	1 cut(s)	499
Bbv12I	GWGCWC	2 cut(s)	1138, 1415
BbvCI	CCTCAGC	2 cut(s)	458, 1221
BbvI	GCAGC	5 cut(s)	93, 248, 607, 1226, 1229
BccI	CCATC	4 cut(s)	647, 823, 1052, 1357
BceAI	ACGGC	4 cut(s)	205, 400, 758, 1448
BciT130I	CCWGG	5 cut(s)	747, 891, 1080, 1119, 1331
BclI	TGATCA	2 cut(s)	343, 351
BcnI	CCSGG	1 cut(s)	693
BcoDI	GTCTC	3 cut(s)	84, 135, 406
BfaI	CTAG	1 cut(s)	737
BfmI	CTRYAG	2 cut(s)	1240, 1416
BfuAI	ACCTGC	2 cut(s)	1409, 1586
BisI	GCNGC	9 cut(s)	107, 262, 428, 431, 621, 689, 984, 1215, 1218
BlsI	GCNGC	9 cut(s)	108, 263, 429, 432, 622, 690, 985, 1216, 1219
BmcAI	AGTACT	1 cut(s)	338
Bme1390I	CCNGG	6 cut(s)	693, 747, 891, 1080, 1119, 1331
Bme18I	GGWCC	4 cut(s)	70, 391, 1198, 1438
BmeRI	GACNNNNNGTC	1 cut(s)	76
BmeT110I	CYCGRG	1 cut(s)	101
BmgT120I	GGNCC	7 cut(s)	70, 391, 495, 496, 1076, 1198, 1438
BmiI	GGNNCC	7 cut(s)	193, 327, 496, 497, 721, 1227, 1440
BmrFI	CCNGG	6 cut(s)	693, 747, 891, 1080, 1119, 1331
BmrI	ACTGGG	2 cut(s)	32, 637
BmsI	GCATC	4 cut(s)	1183, 1201, 1400, 1569
BmuI	ACTGGG	2 cut(s)	32, 637
BplI	GAGNNNNNCTC	4 cut(s)	206, 238, 1171, 1203
Bpu10I	CCTNAGC	2 cut(s)	458, 1221
BpuEI	CTTGAG	1 cut(s)	1189
BpuMI	CCSGG	1 cut(s)	693
BsaBI	GATNNNNATC	1 cut(s)	250
BsaHI	GRCGYC	2 cut(s)	128, 1051
BsaI	GGTCTC	1 cut(s)	406
BsaJI	CCNNGG	9 cut(s)	53, 282, 382, 520, 746, 1045, 1079, 1329, 1612
BsaXI	ACNNNNNCTCC	8 cut(s)	164, 194, 516, 546, 885, 915, 1533, 1563
Bsc4I	CCNNNNNNNGG	9 cut(s)	54, 388, 434, 515, 962, 1046, 1073, 1330, 1336
Bse118I	RCCGGY	1 cut(s)	588
Bse1I	ACTGG	2 cut(s)	27, 643
Bse3DI	GCAATG	1 cut(s)	630
Bse8I	GATNNNNATC	1 cut(s)	250
BseBI	CCWGG	5 cut(s)	747, 891, 1080, 1119, 1331
BseDI	CCNNGG	9 cut(s)	53, 282, 382, 520, 746, 1045, 1079, 1329, 1612
BseGI	GGATG	3 cut(s)	638, 1089, 1391
BseJI	GATNNNNATC	1 cut(s)	250
BseLI	CCNNNNNNNGG	9 cut(s)	54, 388, 434, 515, 962, 1046, 1073, 1330, 1336
BseMI	GCAATG	1 cut(s)	630
BseMII	CTCAG	4 cut(s)	449, 1169, 1212, 1389
BseNI	ACTGG	2 cut(s)	27, 643
BseRI	GAGGAG	1 cut(s)	475
BseSI	GKGCMC	1 cut(s)	499
BseX3I	CGGCCG	1 cut(s)	1433
BseXI	GCAGC	5 cut(s)	93, 248, 607, 1226, 1229
BseYI	CCCAGC	1 cut(s)	419
BsgI	GTGCAG	1 cut(s)	1443
Bsh1236I	CGCG	3 cut(s)	389, 581, 606
Bsh1285I	CGRYCG	1 cut(s)	1436
BshFI	GGCC	8 cut(s)	381, 497, 519, 745, 951, 983, 1078, 1435
BshNI	GGYRCC	1 cut(s)	191
BsiEI	CGRYCG	1 cut(s)	1436
BsiHKAI	GWGCWC	2 cut(s)	1138, 1415
BsiHKCI	CYCGRG	1 cut(s)	101
BsiSI	CCGG	6 cut(s)	369, 589, 668, 692, 806, 1436
BslFI	GGGAC	2 cut(s)	27, 764
BslI	CCNNNNNNNGG	9 cut(s)	54, 388, 434, 515, 962, 1046, 1073, 1330, 1336
BsmAI	GTCTC	3 cut(s)	84, 135, 406
BsmBI	CGTCTC	1 cut(s)	135
BsmFI	GGGAC	2 cut(s)	27, 764
BsmI	GAATGC	1 cut(s)	1459
BsnI	GGCC	8 cut(s)	381, 497, 519, 745, 951, 983, 1078, 1435
Bso31I	GGTCTC	1 cut(s)	406
BsoBI	CYCGRG	1 cut(s)	101
Bsp120I	GGGCCC	1 cut(s)	495
Bsp1286I	GDGCHC	3 cut(s)	499, 1138, 1415
Bsp143I	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
Bsp19I	CCATGG	1 cut(s)	520
BspANI	GGCC	8 cut(s)	381, 497, 519, 745, 951, 983, 1078, 1435
BspCNI	CTCAG	4 cut(s)	450, 1170, 1213, 1390
BspFNI	CGCG	3 cut(s)	389, 581, 606
BspLI	GGNNCC	7 cut(s)	193, 327, 496, 497, 721, 1227, 1440
BspMAI	CTGCAG	1 cut(s)	1420
BspMI	ACCTGC	2 cut(s)	1409, 1586
BspPI	GGATC	2 cut(s)	1220, 1233
BspQI	GCTCTTC	1 cut(s)	461
BspT107I	GGYRCC	1 cut(s)	191
BspTNI	GGTCTC	1 cut(s)	406
BsrDI	GCAATG	1 cut(s)	630
BsrFI	RCCGGY	1 cut(s)	588
BsrI	ACTGG	2 cut(s)	27, 643
BssAI	RCCGGY	1 cut(s)	588
BssECI	CCNNGG	9 cut(s)	53, 282, 382, 520, 746, 1045, 1079, 1329, 1612
BssMI	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
BssNI	GRCGYC	2 cut(s)	128, 1051
BssT1I	CCWWGG	3 cut(s)	282, 520, 1045
Bst2UI	CCWGG	5 cut(s)	747, 891, 1080, 1119, 1331
Bst4CI	ACNGT	6 cut(s)	74, 150, 196, 361, 700, 1249
Bst6I	CTCTTC	2 cut(s)	170, 461
BstACI	GRCGYC	2 cut(s)	128, 1051
BstC8I	GCNNGC	3 cut(s)	49, 425, 473
BstDEI	CTNAG	4 cut(s)	458, 1178, 1221, 1398
BstDSI	CCRYGG	2 cut(s)	382, 520
BstEII	GGTNACC	1 cut(s)	1061
BstENI	CCTNNNNNAGG	1 cut(s)	1328
BstF5I	GGATG	3 cut(s)	638, 1089, 1391
BstFNI	CGCG	3 cut(s)	389, 581, 606
BstHHI	GCGC	1 cut(s)	389
BstKTI	GATC	6 cut(s)	346, 354, 736, 918, 1228, 1291
BstMAI	GTCTC	3 cut(s)	84, 135, 406
BstMBI	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
BstMCI	CGRYCG	1 cut(s)	1436
BstMWI	GCNNNNNNNGC	9 cut(s)	270, 378, 395, 439, 737, 1106, 1180, 1189, 1592
BstNI	CCWGG	5 cut(s)	747, 891, 1080, 1119, 1331
BstNSI	RCATGY	1 cut(s)	8
BstPI	GGTNACC	1 cut(s)	1061
BstSCI	CCNGG	6 cut(s)	691, 745, 889, 1078, 1117, 1329
BstSFI	CTRYAG	2 cut(s)	1240, 1416
BstSLI	GKGCMC	1 cut(s)	499
BstUI	CGCG	3 cut(s)	389, 581, 606
BstV1I	GCAGC	5 cut(s)	93, 248, 607, 1226, 1229
BstX2I	RGATCY	1 cut(s)	1225
BstYI	RGATCY	1 cut(s)	1225
BstZI	CGGCCG	1 cut(s)	1433
BsuRI	GGCC	8 cut(s)	381, 497, 519, 745, 951, 983, 1078, 1435
BtgI	CCRYGG	2 cut(s)	382, 520
BtsCI	GGATG	3 cut(s)	638, 1089, 1391
BtsI	GCAGTG	1 cut(s)	1413
BtsIMutI	CAGTG	1 cut(s)	1413
BveI	ACCTGC	2 cut(s)	1409, 1586
Cac8I	GCNNGC	3 cut(s)	49, 425, 473
CaiI	CAGNNNCTG	1 cut(s)	1220
CfoI	GCGC	1 cut(s)	389
Cfr10I	RCCGGY	1 cut(s)	588
Cfr13I	GGNCC	7 cut(s)	70, 391, 495, 496, 1076, 1198, 1438
CseI	GACGC	2 cut(s)	117, 1059
Csp6I	GTAC	2 cut(s)	337, 696
CspCI	CAANNNNNGTGG	2 cut(s)	976, 1011
CviAII	CATG	5 cut(s)	5, 400, 443, 521, 1202
CviQI	GTAC	2 cut(s)	337, 696
DdeI	CTNAG	4 cut(s)	458, 1178, 1221, 1398
DpnI	GATC	6 cut(s)	345, 353, 735, 917, 1227, 1290
DpnII	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
DriI	GACNNNNNGTC	1 cut(s)	76
EaeI	YGGCCR	4 cut(s)	517, 743, 981, 1433
EagI	CGGCCG	1 cut(s)	1433
Eam1104I	CTCTTC	2 cut(s)	170, 461
Eam1105I	GACNNNNNGTC	1 cut(s)	76
EarI	CTCTTC	2 cut(s)	170, 461
EciI	GGCGGA	3 cut(s)	158, 789, 1198
EclXI	CGGCCG	1 cut(s)	1433
Eco130I	CCWWGG	3 cut(s)	282, 520, 1045
Eco24I	GRGCYC	1 cut(s)	499
Eco31I	GGTCTC	1 cut(s)	406
Eco47I	GGWCC	4 cut(s)	70, 391, 1198, 1438
Eco52I	CGGCCG	1 cut(s)	1433
Eco57I	CTGAAG	2 cut(s)	1116, 1464
Eco88I	CYCGRG	1 cut(s)	101
Eco91I	GGTNACC	1 cut(s)	1061
EcoNI	CCTNNNNNAGG	1 cut(s)	1328
EcoO109I	RGGNCCY	2 cut(s)	495, 496
EcoO65I	GGTNACC	1 cut(s)	1061
EcoRII	CCWGG	5 cut(s)	745, 889, 1078, 1117, 1329
EcoT14I	CCWWGG	3 cut(s)	282, 520, 1045
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	499
ErhI	CCWWGG	3 cut(s)	282, 520, 1045
Esp3I	CGTCTC	1 cut(s)	135
FaeI	CATG	5 cut(s)	8, 403, 446, 524, 1205
FaqI	GGGAC	2 cut(s)	27, 764
FatI	CATG	5 cut(s)	4, 399, 442, 520, 1201
FauI	CCCGC	2 cut(s)	52, 150
FbaI	TGATCA	2 cut(s)	343, 351
Fnu4HI	GCNGC	9 cut(s)	107, 262, 428, 431, 621, 689, 984, 1215, 1218
FokI	GGATG	3 cut(s)	625, 1096, 1378
FriOI	GRGCYC	1 cut(s)	499
Fsp4HI	GCNGC	9 cut(s)	107, 262, 428, 431, 621, 689, 984, 1215, 1218
FspBI	CTAG	1 cut(s)	737
GlaI	GCGC	1 cut(s)	388
GluI	GCNGC	9 cut(s)	107, 262, 428, 431, 621, 689, 984, 1215, 1218
GsaI	CCCAGC	1 cut(s)	423
HaeIII	GGCC	8 cut(s)	381, 497, 519, 745, 951, 983, 1078, 1435
HapII	CCGG	6 cut(s)	369, 589, 668, 692, 806, 1436
HgaI	GACGC	2 cut(s)	117, 1059
HhaI	GCGC	1 cut(s)	389
Hin1I	GRCGYC	2 cut(s)	128, 1051
Hin1II	CATG	5 cut(s)	8, 403, 446, 524, 1205
Hin6I	GCGC	1 cut(s)	387
HinP1I	GCGC	1 cut(s)	387
HincII	GTYRAC	2 cut(s)	153, 887
HindII	GTYRAC	2 cut(s)	153, 887
HinfI	GANTC	4 cut(s)	221, 246, 560, 1186
HpaII	CCGG	6 cut(s)	369, 589, 668, 692, 806, 1436
HphI	GGTGA	6 cut(s)	349, 361, 539, 838, 1073, 1460
Hpy166II	GTNNAC	3 cut(s)	153, 887, 1570
Hpy188I	TCNGA	8 cut(s)	121, 245, 1096, 1179, 1356, 1399, 1482, 1565
Hpy188III	TCNNGA	3 cut(s)	634, 1168, 1277
Hpy8I	GTNNAC	3 cut(s)	153, 887, 1570
Hpy99I	CGWCG	1 cut(s)	377
HpyAV	CCTTC	8 cut(s)	193, 442, 962, 1124, 1141, 1334, 1439, 1576
HpyCH4III	ACNGT	6 cut(s)	74, 150, 196, 361, 700, 1249
HpyCH4IV	ACGT	2 cut(s)	900, 936
HpyCH4V	TGCA	8 cut(s)	4, 599, 623, 649, 998, 1214, 1418, 1424
HpyF10VI	GCNNNNNNNGC	9 cut(s)	270, 378, 395, 439, 737, 1106, 1180, 1189, 1592
HpyF3I	CTNAG	4 cut(s)	458, 1178, 1221, 1398
HpySE526I	ACGT	2 cut(s)	900, 936
Hsp92I	GRCGYC	2 cut(s)	128, 1051
Hsp92II	CATG	5 cut(s)	8, 403, 446, 524, 1205
HspAI	GCGC	1 cut(s)	387
Ksp22I	TGATCA	2 cut(s)	343, 351
Kzo9I	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
LguI	GCTCTTC	1 cut(s)	461
LmnI	GCTCC	4 cut(s)	93, 670, 808, 1483
Lsp1109I	GCAGC	5 cut(s)	93, 248, 607, 1226, 1229
LweI	GCATC	4 cut(s)	1183, 1201, 1400, 1569
MaeI	CTAG	1 cut(s)	737
MaeII	ACGT	2 cut(s)	900, 936
MaeIII	GTNAC	1 cut(s)	1061
MalI	GATC	6 cut(s)	345, 353, 735, 917, 1227, 1290
MboI	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
MboII	GAAGA	7 cut(s)	157, 285, 478, 497, 1083, 1268, 1373
MflI	RGATCY	1 cut(s)	1225
MhlI	GDGCHC	3 cut(s)	499, 1138, 1415
MlsI	TGGCCA	1 cut(s)	519
MluCI	AATT	6 cut(s)	267, 572, 756, 1162, 1259, 1317
MluNI	TGGCCA	1 cut(s)	519
MlyI	GAGTC	2 cut(s)	215, 1180
MmeI	TCCRAC	3 cut(s)	48, 549, 1505
Mox20I	TGGCCA	1 cut(s)	519
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	519
MseI	TTAA	3 cut(s)	317, 1034, 1428
MslI	CAYNNNNRTG	2 cut(s)	525, 845
Msp20I	TGGCCA	1 cut(s)	519
MspA1I	CMGCKG	2 cut(s)	261, 1220
MspI	CCGG	6 cut(s)	369, 589, 668, 692, 806, 1436
MspR9I	CCNGG	6 cut(s)	693, 747, 891, 1080, 1119, 1331
Mva1269I	GAATGC	1 cut(s)	1459
MvaI	CCWGG	5 cut(s)	747, 891, 1080, 1119, 1331
MvnI	CGCG	3 cut(s)	389, 581, 606
MwoI	GCNNNNNNNGC	9 cut(s)	270, 378, 395, 439, 737, 1106, 1180, 1189, 1592
NciI	CCSGG	1 cut(s)	693
NcoI	CCATGG	1 cut(s)	520
NdeII	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
NlaIII	CATG	5 cut(s)	8, 403, 446, 524, 1205
NlaIV	GGNNCC	7 cut(s)	193, 327, 496, 497, 721, 1227, 1440
NmeAIII	GCCGAG	2 cut(s)	34, 1168
NmuCI	GTSAC	1 cut(s)	1061
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	8
OliI	CACNNNNGTG	1 cut(s)	845
PaeR7I	CTCGAG	1 cut(s)	101
PaqCI	CACCTGC	1 cut(s)	1409
PciSI	GCTCTTC	1 cut(s)	461
PcsI	WCGNNNNNNNCGW	1 cut(s)	125
PctI	GAATGC	1 cut(s)	1459
PfeI	GAWTC	2 cut(s)	246, 560
PflMI	CCANNNNNTGG	2 cut(s)	962, 1046
PkrI	GCNGC	9 cut(s)	108, 263, 429, 432, 622, 690, 985, 1216, 1219
PleI	GAGTC	2 cut(s)	215, 1180
PpsI	GAGTC	2 cut(s)	215, 1180
Psp6I	CCWGG	5 cut(s)	745, 889, 1078, 1117, 1329
PspEI	GGTNACC	1 cut(s)	1061
PspFI	CCCAGC	1 cut(s)	419
PspGI	CCWGG	5 cut(s)	745, 889, 1078, 1117, 1329
PspN4I	GGNNCC	7 cut(s)	193, 327, 496, 497, 721, 1227, 1440
PspOMI	GGGCCC	1 cut(s)	495
PspPI	GGNCC	7 cut(s)	70, 391, 495, 496, 1076, 1198, 1438
PspXI	VCTCGAGB	1 cut(s)	101
PstI	CTGCAG	1 cut(s)	1420
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	1 cut(s)	1225
PvuII	CAGCTG	2 cut(s)	261, 1220
RsaI	GTAC	2 cut(s)	338, 697
RsaNI	GTAC	2 cut(s)	337, 696
RseI	CAYNNNNRTG	2 cut(s)	525, 845
SapI	GCTCTTC	1 cut(s)	461
SaqAI	TTAA	3 cut(s)	317, 1034, 1428
SatI	GCNGC	9 cut(s)	107, 262, 428, 431, 621, 689, 984, 1215, 1218
Sau3AI	GATC	6 cut(s)	343, 351, 733, 915, 1225, 1288
Sau96I	GGNCC	7 cut(s)	70, 391, 495, 496, 1076, 1198, 1438
ScaI	AGTACT	1 cut(s)	338
SchI	GAGTC	2 cut(s)	215, 1180
ScrFI	CCNGG	6 cut(s)	693, 747, 891, 1080, 1119, 1331
SduI	GDGCHC	3 cut(s)	499, 1138, 1415
SfaNI	GCATC	4 cut(s)	1183, 1201, 1400, 1569
SfcI	CTRYAG	2 cut(s)	1240, 1416
Sfr274I	CTCGAG	1 cut(s)	101
SinI	GGWCC	4 cut(s)	70, 391, 1198, 1438
SlaI	CTCGAG	1 cut(s)	101
SmiMI	CAYNNNNRTG	2 cut(s)	525, 845
SmlI	CTYRAG	2 cut(s)	101, 1168
SmoI	CTYRAG	2 cut(s)	101, 1168
Sse9I	AATT	6 cut(s)	267, 572, 756, 1162, 1259, 1317
SspMI	CTAG	1 cut(s)	737
StyD4I	CCNGG	6 cut(s)	691, 745, 889, 1078, 1117, 1329
StyI	CCWWGG	3 cut(s)	282, 520, 1045
TaaI	ACNGT	6 cut(s)	74, 150, 196, 361, 700, 1249
TaiI	ACGT	2 cut(s)	903, 939
TaqI	TCGA	3 cut(s)	102, 224, 1291
TasI	AATT	6 cut(s)	267, 572, 756, 1162, 1259, 1317
TatI	WGTACW	1 cut(s)	336
TauI	GCSGC	4 cut(s)	430, 433, 691, 986
TfiI	GAWTC	2 cut(s)	246, 560
Tru1I	TTAA	3 cut(s)	317, 1034, 1428
Tru9I	TTAA	3 cut(s)	317, 1034, 1428
TscAI	CASTG	1 cut(s)	1420
TseFI	GTSAC	1 cut(s)	1061
TseI	GCWGC	5 cut(s)	106, 261, 620, 1214, 1217
Tsp45I	GTSAC	1 cut(s)	1061
TspDTI	ATGAA	1 cut(s)	1458
TspGWI	ACGGA	3 cut(s)	54, 390, 1373
TspRI	CASTG	1 cut(s)	1420
Van91I	CCANNNNNTGG	2 cut(s)	962, 1046
VpaK11BI	GGWCC	4 cut(s)	70, 391, 1198, 1438
XagI	CCTNNNNNAGG	1 cut(s)	1328
XapI	RAATTY	2 cut(s)	572, 756
XceI	RCATGY	1 cut(s)	8
XcmI	CCANNNNNNNNNTGG	1 cut(s)	650
XhoI	CTCGAG	1 cut(s)	101
XspI	CTAG	1 cut(s)	737
ZrmI	AGTACT	1 cut(s)	338
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.