Belongs to the universal ribosomal protein uS3 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g09470 |
| rosa_rugosa | RorugPtG0000300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 73, 86, 187 |
| AcsI | RAATTY | 1 cut(s) | 140 |
| AlwI | GGATC | 3 cut(s) | 73, 86, 187 |
| ApoI | RAATTY | 1 cut(s) | 140 |
| AseI | ATTAAT | 1 cut(s) | 203 |
| BamHI | GGATCC | 1 cut(s) | 78 |
| BccI | CCATC | 1 cut(s) | 44 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BmiI | GGNNCC | 1 cut(s) | 80 |
| Bse3DI | GCAATG | 1 cut(s) | 18 |
| BseMI | GCAATG | 1 cut(s) | 18 |
| Bsp143I | GATC | 3 cut(s) | 78, 123, 192 |
| BspLI | GGNNCC | 1 cut(s) | 80 |
| BspPI | GGATC | 3 cut(s) | 73, 86, 187 |
| BsrDI | GCAATG | 1 cut(s) | 18 |
| BssMI | GATC | 3 cut(s) | 78, 123, 192 |
| BstKTI | GATC | 3 cut(s) | 81, 126, 195 |
| BstMBI | GATC | 3 cut(s) | 78, 123, 192 |
| BstNSI | RCATGY | 1 cut(s) | 69 |
| BstX2I | RGATCY | 1 cut(s) | 78 |
| BstYI | RGATCY | 1 cut(s) | 78 |
| CviAII | CATG | 1 cut(s) | 66 |
| DpnI | GATC | 3 cut(s) | 80, 125, 194 |
| DpnII | GATC | 3 cut(s) | 78, 123, 192 |
| FaeI | CATG | 1 cut(s) | 69 |
| FaiI | YATR | 1 cut(s) | 67 |
| FatI | CATG | 1 cut(s) | 65 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| Hin1II | CATG | 1 cut(s) | 69 |
| HinfI | GANTC | 1 cut(s) | 114 |
| Hpy188I | TCNGA | 1 cut(s) | 192 |
| Hpy188III | TCNNGA | 1 cut(s) | 222 |
| HpyAV | CCTTC | 1 cut(s) | 181 |
| HpyCH4V | TGCA | 1 cut(s) | 18 |
| Hsp92II | CATG | 1 cut(s) | 69 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 3 cut(s) | 78, 123, 192 |
| MaeIII | GTNAC | 1 cut(s) | 39 |
| MalI | GATC | 3 cut(s) | 80, 125, 194 |
| MboI | GATC | 3 cut(s) | 78, 123, 192 |
| MflI | RGATCY | 1 cut(s) | 78 |
| MluCI | AATT | 4 cut(s) | 140, 166, 204, 210 |
| MlyI | GAGTC | 1 cut(s) | 123 |
| MnlI | CCTC | 4 cut(s) | 108, 144, 185, 196 |
| MseI | TTAA | 1 cut(s) | 203 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| NdeII | GATC | 3 cut(s) | 78, 123, 192 |
| NlaIII | CATG | 1 cut(s) | 69 |
| NlaIV | GGNNCC | 1 cut(s) | 80 |
| NspI | RCATGY | 1 cut(s) | 69 |
| PleI | GAGTC | 1 cut(s) | 122 |
| PpsI | GAGTC | 1 cut(s) | 122 |
| PshBI | ATTAAT | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 1 cut(s) | 80 |
| PsuI | RGATCY | 1 cut(s) | 78 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| SaqAI | TTAA | 1 cut(s) | 203 |
| Sau3AI | GATC | 3 cut(s) | 78, 123, 192 |
| SchI | GAGTC | 1 cut(s) | 123 |
| SgeI | CNNG | 6 cut(s) | 24, 48, 78, 95, 125, 168 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| Sse9I | AATT | 4 cut(s) | 140, 166, 204, 210 |
| TaqI | TCGA | 1 cut(s) | 112 |
| TasI | AATT | 4 cut(s) | 140, 166, 204, 210 |
| Tru1I | TTAA | 1 cut(s) | 203 |
| Tru9I | TTAA | 1 cut(s) | 203 |
| TspGWI | ACGGA | 1 cut(s) | 204 |
| VspI | ATTAAT | 1 cut(s) | 203 |
| XapI | RAATTY | 1 cut(s) | 140 |
| XceI | RCATGY | 1 cut(s) | 69 |