pycom15g18910
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
13414586 .. 13421513
6928 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2901 bp
ATGTGGTTGCAGAGCACCATGTTTCTGATGGATCTGTTGGCAGCCTCCAAATGCTCTTTTGTGGCAGGGCTATTTCCTCCACTTCCAGAGGAATCATCCAAGTCATCTAAGTTTTCATCCATTGGATCACGCTTCAAGTTACAACTACAATCTTTGATGGAGACCTTGAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCGAACAGTGTCCTCAAGCCTGCCATTTTTGAGAACTTTAACATCATACAACAATTACGCTGTGGTGGTGTTCTTGAGGCAATTAGGATCAGCTGTGCTGGATATCCTACCCGACGTACATTTTATGAGTTTCTTCTCCGCTTTGGTGTTCTTGCTCCTGAAGTTTTGGAAGGAAACTGCGAGGACAAGGTTGCATGTCAAATGATCCTGGATAAACTGGGATTGACTGGTTATCAGATAGGCAAGACAAAGGTCTTTCTAAGAGCTGGTCAGATGGCTGAGTTGGATGCAAGGAGAGCAGAGGTACTTGGAAATGCAGCCAGAACTATACAAAGGCAAATTCGTACATATGTTGCACGCAAAGAGTTCTTTGCATTACGCAAAGCTGCCATTCAATTGCAATCATATGTGAGAGGAACATATGCTCGTGAGATATTTGAGCAGCTGCGACAACAAGCAGCAGCTGTCAAGATACAGAAAGATTTCCAACGATACATTGCCAGGAAATCCTACTTGACAGTACGATTGTCTGCAATCACAATACAGACAGGGTTGAGGGCAATGACTGCTCGAAATGAATTCAGATTCAGAAAGCAAACTAAGGCTGCGATTCTTCTCCAGACTCGTTTGCGTGGCCACGTAGCGTATTCTTATTATAGGAGTCTCCAGAAAGCTGCTTTATATACTCAGTGTGGGTGGAGGCGTAGGGTTGCCCGGAGAGAGCTCAGAAATCTCAAAATGGCTGCAAGAGAAACGGGGGCCCTAAAAGAAGCTAAAGACAAACTAGAAAAGCGTGTGGAAGAACTTACATGGCGCTTACAACTTGAGAAGCGATTAAGGACTGATTTAGAAGAGGAAAAAGCCCAAGAAACTGCTAAGTTGCAAGAAGCTTTGCATGCAATGCAAATACAAATACAAGAGGCAAATGCCAGAGCAATTAGAGAACGAGAAGAACTCGAGAAAGCTATTAAAGAAGCACCTCCTGTCATTAAGGAGACTCCTGTTATACTTCAAGACACTGAAAAAATCGACTCGTTATCAGCTGAGGTGGAGAGTTTGAAGGCCTTGTTGCTCTCAGAAAGAAAGGCAGCGGAAGAGGCAAGGAAAGCTTCTATTGATGCTGAGGCTAGAAATGCAGAGCTGGTCAAACAATTTGAAGATTCATGCAGAAAAATGGATCAGCTTCAGGAATCTGTACAGAGGCTAGAGGAGAAACTTTCTAACACAGAGTCGGAAAATCAAGTACTTCGTCAACAAGCATTGACTATGTCACCGACTGGAAAATCTCTATCATCAAGATCAAAGACGGTGATTATTCAGAGGACATCAGAGAATGGGAATCATCTAAATGGAGAATCCAAGGTCACATCGGAAATGACTCTTGCCCTACCAAATGCACGTGAACCTGAGTCAGAGGAAAAACCACAGAAATCTCTAAATGAAAAGCAGCTGGAGAACCAGGACTTGCTGGTCAAATGCATATCACAAGATTTGGGTTTTTTCGGGGGAAGACCAATTGCTGCTTGTGTCATATACAAATGTCTTCTTCACTGGAGGTCCTTTGAAGTGGAAAGGACTGGAATTTTCGACCGTGTAATTCAAACAATAGCTTCAGCCATAGAGGTCCTGGATAATAATGACGTATTAGCTTATTGGTTATCCAATACCTCAACTTTATTATTGTTGCTCCAACACACACTTAAGGCAAGTGGAGCAGCTAGCTTGACACCACAACGGCGGAGAACGACATCAGCATCTCTTTTTGGAAGGATGTCTCAGGGATTACGGGCTTCTCCTCAAAGTGGGGGGCTCTCATTTATTACTGGTCGAGGACTTGGTAGACTGGATGACTTACGGCAAGTTGAGGCCAAGTATCCTGCATTATTGTTTAAGCAGCAGCTTACTGCCTTCCTTGAGAAGATATATGGAATGATAAGAGACAATTTGAAGAAGGAGATATCACCATTACTCGGATTCTGTATCCAGGCCCCCAGGACGTCACGGGCAAGTTTAGTGAAAGGACGTGCCCAAGCTAATGCTGTCGCTCAGCAAGCTTTAATTGCTCATTGGCAAAGCATTGTGAAAAGCTTGGACAGTTGTTTGAAGACAATGAAAGCAAATTATGTGCCTCCCTTCTTGGTGCGCAAGGTGTTCACTCAGATATTTTCATTCATCAATGTCCAGCTATTCAATAGTCTTCTTTTGCGGCGCGAGTGTTGTTCATTCAGTAATGGGGAGTATGTAAAAGCGGGTTTGGCGGAATTAGAACAGTGGTGCTACGGGGCAGGCGAGGAATACGCAGGCTCAGCTTGGGATGAACTGAAGCATATTAGGCAGGCTGTTGGATTCCTTGTTATACATCAGAAACCAAAGAAGACCTTGAATGAAATAACAAAAGAACTGTGCCCGGTGCTTAGCATACAGCAGTTATACAGGATCAGTACAATGTACTGGGATGACAAGTACGGTACACACAGTGTTTCGTCAGATGTTATTTCAAGCATGAGAGTTCTAATGACTGAGGACTCCAACAATGCTGTGAGCAGCTCTTTCCTGTTAGATGACGACTCAAGCATACCATTCTCGGTGGACGACATCTCAAAGTCAATGCAACAAGTAGACATAACCGACATTGAACCTCCACCGTTGATTCGTGAAAACTCTGGGTTTGGCTTCTTACTCCCTCGGTCTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000146 GO:0000166 GO:0000331 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0005911 GO:0006928 GO:0007275 GO:0008092 GO:0008144 GO:0008150 GO:0009506 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009908 GO:0009932 GO:0009987 GO:0010015 GO:0010026 GO:0010053 GO:0010054 GO:0010090 GO:0010091 GO:0012505 GO:0015629 GO:0016043 GO:0016049 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0021700 GO:0022414 GO:0022622 GO:0030029 GO:0030048 GO:0030054 GO:0030133 GO:0030154 GO:0030554 GO:0030898 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0033275 GO:0035618 GO:0035619 GO:0035639 GO:0036094 GO:0040007 GO:0042623 GO:0042641 GO:0042995 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044463 GO:0044464 GO:0044877 GO:0048364 GO:0048366 GO:0048367 GO:0048438 GO:0048467 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048608 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048768 GO:0048827 GO:0048856 GO:0048869 GO:0051015 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051645 GO:0051646 GO:0051656 GO:0055044 GO:0060151 GO:0060560 GO:0061458 GO:0070252 GO:0071695 GO:0071840 GO:0080147 GO:0090436 GO:0090558 GO:0090567 GO:0090626 GO:0090627 GO:0097159 GO:0097367 GO:0097708 GO:0099402 GO:0120025 GO:0120038 GO:0140027 GO:1901265 GO:1901363 GO:1905392
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

967

Amino Acids

109.4

Weight (kDa)

9.33

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_head PF00063 31 - 156 2.1e-33 Myosin head (motor domain)
DIL PF01843 784 - 888 2.1e-31 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1673
AatII GACGTC 1 cut(s) 2204
Acc16I TGCGCA 1 cut(s) 2348
AccI GTMKAC 2 cut(s) 2044, 2823
AccII CGCG 1 cut(s) 2415
AciI CCGC 6 cut(s) 343, 1295, 1942, 2410, 2453, 2462
AclWI GGATC 6 cut(s) 39, 133, 299, 403, 1389, 2648
AcoI YGGCCR 1 cut(s) 838
AcsI RAATTY 4 cut(s) 169, 543, 782, 1785
AcuI CTGAAG 4 cut(s) 384, 1373, 1800, 2546
AcvI CACGTG 1 cut(s) 1604
AcyI GRCGYC 1 cut(s) 2201
AdeI CACNNNGTG 1 cut(s) 2681
AfiI CCNNNNNNNGG 2 cut(s) 2006, 2174
AflII CTTAAG 1 cut(s) 1904
AjiI CACGTC 1 cut(s) 2228
AjnI CCWGG 6 cut(s) 411, 704, 1662, 1830, 2187, 2195
Alw21I GWGCWC 2 cut(s) 17, 930
Alw26I GTCTC 5 cut(s) 155, 872, 1193, 1983, 2136
AlwI GGATC 6 cut(s) 39, 133, 299, 403, 1389, 2648
AlwNI CAGNNNCTG 1 cut(s) 668
Ama87I CYCGRG 1 cut(s) 1160
AoxI GGCC 5 cut(s) 838, 963, 1266, 2070, 2190
ApaI GGGCCC 1 cut(s) 967
ApoI RAATTY 4 cut(s) 169, 543, 782, 1785
Asp700I GAANNNNTTC 1 cut(s) 686
AspLEI GCGC 3 cut(s) 1020, 2349, 2415
AspS9I GGNCC 5 cut(s) 963, 964, 1761, 1828, 2191
AsuC2I CCSGG 2 cut(s) 919, 2612
AsuHPI GGTGA 3 cut(s) 1467, 1525, 2157
AsuNHI GCTAGC 1 cut(s) 1922
AvaI CYCGRG 1 cut(s) 1160
AvaII GGWCC 2 cut(s) 1761, 1828
BaeGI GKGCMC 3 cut(s) 967, 2233, 2612
BalI TGGCCA 1 cut(s) 840
BanII GRGCYC 3 cut(s) 930, 967, 2016
BauI CACGAG 1 cut(s) 630
BbrPI CACGTG 1 cut(s) 1604
BbsI GAAGAC 5 cut(s) 1720, 1739, 2315, 2393, 2585
Bbv12I GWGCWC 2 cut(s) 17, 930
BbvCI CCTCAGC 2 cut(s) 1248, 1326
BccI CCATC 3 cut(s) 22, 151, 472
BceAI ACGGC 2 cut(s) 1955, 2075
BciT130I CCWGG 6 cut(s) 413, 706, 1664, 1832, 2189, 2197
BciVI GTATCC 2 cut(s) 2088, 2195
BcnI CCSGG 2 cut(s) 919, 2612
BcoDI GTCTC 5 cut(s) 155, 872, 1193, 1983, 2136
BfaI CTAG 4 cut(s) 989, 1332, 1409, 1923
BfoI RGCGCY 1 cut(s) 1021
BfrI CTTAAG 1 cut(s) 1904
BfuI GTATCC 2 cut(s) 2088, 2195
BlpI GCTNAGC 3 cut(s) 2250, 2509, 2618
BmcAI AGTACT 1 cut(s) 1449
Bme1390I CCNGG 8 cut(s) 413, 706, 919, 1664, 1832, 2189, 2197, 2612
Bme18I GGWCC 2 cut(s) 1761, 1828
BmeT110I CYCGRG 1 cut(s) 1160
BmgBI CACGTC 1 cut(s) 2228
BmgT120I GGNCC 5 cut(s) 963, 964, 1761, 1828, 2191
BmiI GGNNCC 3 cut(s) 964, 965, 2193
BmrFI CCNGG 8 cut(s) 413, 706, 919, 1664, 1832, 2189, 2197, 2612
BmrI ACTGGG 2 cut(s) 431, 2665
BmsI GCATC 3 cut(s) 481, 1312, 1967
BmtI GCTAGC 1 cut(s) 1926
BmuI ACTGGG 2 cut(s) 431, 2665
BoxI GACNNNNGTC 1 cut(s) 455
BpiI GAAGAC 5 cut(s) 1720, 1739, 2315, 2393, 2585
BplI GAGNNNNNCTC 2 cut(s) 1143, 1175
BpmI CTGGAG 4 cut(s) 806, 854, 1676, 1777
Bpu10I CCTNAGC 2 cut(s) 1248, 1326
Bpu1102I GCTNAGC 3 cut(s) 2250, 2509, 2618
BpuEI CTTGAG 5 cut(s) 203, 299, 1049, 2138, 2758
BpuMI CCSGG 2 cut(s) 919, 2612
BsaAI YACGTR 2 cut(s) 844, 1604
BsaHI GRCGYC 1 cut(s) 2201
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 3 cut(s) 1563, 2195, 2888
Bsc4I CCNNNNNNNGG 2 cut(s) 2006, 2174
Bse1I ACTGG 8 cut(s) 426, 436, 1486, 1760, 1786, 2032, 2052, 2660
Bse3DI GCAATG 3 cut(s) 699, 771, 1110
BseBI CCWGG 6 cut(s) 413, 706, 1664, 1832, 2189, 2197
BseDI CCNNGG 3 cut(s) 1563, 2195, 2888
BseGI GGATG 7 cut(s) 95, 116, 496, 1980, 2056, 2524, 2665
BseLI CCNNNNNNNGG 2 cut(s) 2006, 2174
BseMI GCAATG 3 cut(s) 699, 771, 1110
BseNI ACTGG 8 cut(s) 426, 436, 1486, 1760, 1786, 2032, 2052, 2660
BseRI GAGGAG 2 cut(s) 1427, 1989
BseSI GKGCMC 3 cut(s) 967, 2233, 2612
Bsh1236I CGCG 1 cut(s) 2415
Bsh1285I CGRYCG 1 cut(s) 1795
BshFI GGCC 5 cut(s) 840, 965, 1268, 2072, 2192
BsiEI CGRYCG 1 cut(s) 1795
BsiHKAI GWGCWC 2 cut(s) 17, 930
BsiHKCI CYCGRG 1 cut(s) 1160
BsiSI CCGG 2 cut(s) 919, 2612
BslI CCNNNNNNNGG 2 cut(s) 2006, 2174
BsmAI GTCTC 5 cut(s) 155, 872, 1193, 1983, 2136
BsnI GGCC 5 cut(s) 840, 965, 1268, 2072, 2192
Bso31I GGTCTC 1 cut(s) 155
BsoBI CYCGRG 1 cut(s) 1160
Bsp120I GGGCCC 1 cut(s) 963
Bsp1286I GDGCHC 6 cut(s) 17, 930, 967, 2016, 2233, 2612
Bsp1407I TGTACA 1 cut(s) 1399
Bsp143I GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
Bsp1720I GCTNAGC 3 cut(s) 2250, 2509, 2618
BspACI CCGC 6 cut(s) 343, 1295, 1942, 2410, 2453, 2462
BspANI GGCC 5 cut(s) 840, 965, 1268, 2072, 2192
BspFNI CGCG 1 cut(s) 2415
BspLI GGNNCC 3 cut(s) 964, 965, 2193
BspOI GCTAGC 1 cut(s) 1926
BspPI GGATC 6 cut(s) 39, 133, 299, 403, 1389, 2648
BspTI CTTAAG 1 cut(s) 1904
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 3 cut(s) 699, 771, 1110
BsrGI TGTACA 1 cut(s) 1399
BsrI ACTGG 8 cut(s) 426, 436, 1486, 1760, 1786, 2032, 2052, 2660
BssECI CCNNGG 3 cut(s) 1563, 2195, 2888
BssMI GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
BssNI GRCGYC 1 cut(s) 2201
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 1 cut(s) 1563
Bst2BI CACGAG 1 cut(s) 630
Bst2UI CCWGG 6 cut(s) 413, 706, 1664, 1832, 2189, 2197
Bst6I CTCTTC 2 cut(s) 1050, 1293
BstACI GRCGYC 1 cut(s) 2201
BstAFI CTTAAG 1 cut(s) 1904
BstAPI GCANNNNNTGC 2 cut(s) 770, 1105
BstAUI TGTACA 1 cut(s) 1399
BstBAI YACGTR 2 cut(s) 844, 1604
BstC8I GCNNGC 8 cut(s) 225, 562, 1101, 1924, 2256, 2491, 2506, 2541
BstF5I GGATG 7 cut(s) 95, 116, 496, 1980, 2056, 2524, 2665
BstFNI CGCG 1 cut(s) 2415
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 3 cut(s) 1020, 2349, 2415
BstKTI GATC 7 cut(s) 34, 128, 294, 411, 1384, 1505, 2643
BstMAI GTCTC 5 cut(s) 155, 872, 1193, 1983, 2136
BstMBI GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
BstMCI CGRYCG 1 cut(s) 1795
BstNI CCWGG 6 cut(s) 413, 706, 1664, 1832, 2189, 2197
BstNSI RCATGY 2 cut(s) 402, 1103
BstPAI GACNNNNGTC 1 cut(s) 455
BstSCI CCNGG 8 cut(s) 411, 704, 917, 1662, 1830, 2187, 2195, 2610
BstSLI GKGCMC 3 cut(s) 967, 2233, 2612
BstUI CGCG 1 cut(s) 2415
BstV2I GAAGAC 5 cut(s) 1720, 1739, 2315, 2393, 2585
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BsuI GTATCC 2 cut(s) 2088, 2195
BsuRI GGCC 5 cut(s) 840, 965, 1268, 2072, 2192
BtrI CACGTC 1 cut(s) 2228
BtsCI GGATG 7 cut(s) 95, 116, 496, 1980, 2056, 2524, 2665
BtsIMutI CAGTG 6 cut(s) 217, 899, 1221, 1753, 2480, 2686
Cac8I GCNNGC 8 cut(s) 225, 562, 1101, 1924, 2256, 2491, 2506, 2541
CaiI CAGNNNCTG 1 cut(s) 668
CfoI GCGC 3 cut(s) 1020, 2349, 2415
Cfr13I GGNCC 5 cut(s) 963, 964, 1761, 1828, 2191
CviAII CATG 6 cut(s) 19, 399, 1014, 1100, 1368, 2707
DpnI GATC 7 cut(s) 33, 127, 293, 410, 1383, 1504, 2642
DpnII GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
DraIII CACNNNGTG 1 cut(s) 2681
DrdI GACNNNNNNGTC 1 cut(s) 1673
DseDI GACNNNNNNGTC 1 cut(s) 1673
EaeI YGGCCR 1 cut(s) 838
Eam1104I CTCTTC 2 cut(s) 1050, 1293
EarI CTCTTC 2 cut(s) 1050, 1293
EciI GGCGGA 2 cut(s) 1957, 2477
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 1 cut(s) 1563
Eco147I AGGCCT 1 cut(s) 1268
Eco24I GRGCYC 3 cut(s) 930, 967, 2016
Eco31I GGTCTC 1 cut(s) 155
Eco32I GATATC 2 cut(s) 308, 2163
Eco47I GGWCC 2 cut(s) 1761, 1828
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 4 cut(s) 384, 1373, 1800, 2546
Eco72I CACGTG 1 cut(s) 1604
Eco88I CYCGRG 1 cut(s) 1160
EcoICRI GAGCTC 1 cut(s) 928
EcoO109I RGGNCCY 5 cut(s) 963, 964, 1761, 1828, 2191
EcoRI GAATTC 2 cut(s) 169, 782
EcoRII CCWGG 6 cut(s) 411, 704, 1662, 1830, 2187, 2195
EcoRV GATATC 2 cut(s) 308, 2163
EcoT14I CCWWGG 1 cut(s) 1563
EcoT22I ATGCAT 1 cut(s) 1685
EcoT38I GRGCYC 3 cut(s) 930, 967, 2016
ErhI CCWWGG 1 cut(s) 1563
FaeI CATG 6 cut(s) 22, 402, 1017, 1103, 1371, 2710
FalI AAGNNNNNCTT 4 cut(s) 1297, 1329, 2567, 2599
FatI CATG 6 cut(s) 18, 398, 1013, 1099, 1367, 2706
FauI CCCGC 1 cut(s) 2446
FauNDI CATATG 3 cut(s) 553, 610, 625
FblI GTMKAC 2 cut(s) 2044, 2823
FokI GGATG 7 cut(s) 82, 103, 503, 1987, 2063, 2531, 2672
FriOI GRGCYC 3 cut(s) 930, 967, 2016
FspBI CTAG 4 cut(s) 989, 1332, 1409, 1923
FspI TGCGCA 1 cut(s) 2348
GlaI GCGC 3 cut(s) 1019, 2348, 2414
GsuI CTGGAG 4 cut(s) 806, 854, 1676, 1777
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 5 cut(s) 840, 965, 1268, 2072, 2192
HapII CCGG 2 cut(s) 919, 2612
HhaI GCGC 3 cut(s) 1020, 2349, 2415
Hin1I GRCGYC 1 cut(s) 2201
Hin1II CATG 6 cut(s) 22, 402, 1017, 1103, 1371, 2710
Hin6I GCGC 3 cut(s) 1018, 2347, 2413
HinP1I GCGC 3 cut(s) 1018, 2347, 2413
HincII GTYRAC 1 cut(s) 1457
HindII GTYRAC 1 cut(s) 1457
HindIII AAGCTT 4 cut(s) 1092, 1311, 2256, 2290
HpaII CCGG 2 cut(s) 919, 2612
HphI GGTGA 3 cut(s) 1467, 1525, 2157
Hpy166II GTNNAC 7 cut(s) 1457, 1607, 2045, 2358, 2675, 2794, 2824
Hpy8I GTNNAC 7 cut(s) 1457, 1607, 2045, 2358, 2675, 2794, 2824
Hpy99I CGWCG 1 cut(s) 321
HpyAV CCTTC 6 cut(s) 368, 1258, 1965, 2122, 2149, 2347
HpyCH4IV ACGT 6 cut(s) 319, 843, 1603, 1845, 2201, 2227
HpySE526I ACGT 6 cut(s) 319, 843, 1603, 1845, 2201, 2227
Hsp92I GRCGYC 1 cut(s) 2201
Hsp92II CATG 6 cut(s) 22, 402, 1017, 1103, 1371, 2710
HspAI GCGC 3 cut(s) 1018, 2347, 2413
Kzo9I GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
LmnI GCTCC 3 cut(s) 364, 1896, 1916
LweI GCATC 3 cut(s) 481, 1312, 1967
MaeI CTAG 4 cut(s) 989, 1332, 1409, 1923
MaeII ACGT 6 cut(s) 319, 843, 1603, 1845, 2201, 2227
MaeIII GTNAC 4 cut(s) 138, 1473, 1567, 2202
MalI GATC 7 cut(s) 33, 127, 293, 410, 1383, 1504, 2642
MboI GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
MfeI CAATTG 2 cut(s) 599, 1719
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 6 cut(s) 17, 930, 967, 2016, 2233, 2612
MlsI TGGCCA 1 cut(s) 840
MluNI TGGCCA 1 cut(s) 840
MlyI GAGTC 9 cut(s) 820, 874, 1195, 1229, 1442, 1576, 1622, 2723, 2765
MmeI TCCRAC 6 cut(s) 468, 715, 1416, 1918, 2527, 2757
Mox20I TGGCCA 1 cut(s) 840
Mph1103I ATGCAT 1 cut(s) 1685
MroXI GAANNNNTTC 1 cut(s) 686
MscI TGGCCA 1 cut(s) 840
MseI TTAA 7 cut(s) 243, 1040, 1173, 1194, 1905, 2094, 2261
MslI CAYNNNNRTG 1 cut(s) 1551
Msp20I TGGCCA 1 cut(s) 840
MspA1I CMGCKG 6 cut(s) 297, 649, 668, 1247, 1295, 1654
MspCI CTTAAG 1 cut(s) 1904
MspI CCGG 2 cut(s) 919, 2612
MspR9I CCNGG 8 cut(s) 413, 706, 919, 1664, 1832, 2189, 2197, 2612
MunI CAATTG 2 cut(s) 599, 1719
MvaI CCWGG 6 cut(s) 413, 706, 1664, 1832, 2189, 2197
MvnI CGCG 1 cut(s) 2415
NciI CCSGG 2 cut(s) 919, 2612
NdeI CATATG 3 cut(s) 553, 610, 625
NdeII GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
NheI GCTAGC 1 cut(s) 1922
NlaIII CATG 6 cut(s) 22, 402, 1017, 1103, 1371, 2710
NlaIV GGNNCC 3 cut(s) 964, 965, 2193
NmuCI GTSAC 3 cut(s) 1473, 1567, 2202
NsbI TGCGCA 1 cut(s) 2348
NsiI ATGCAT 1 cut(s) 1685
NspI RCATGY 2 cut(s) 402, 1103
PaeI GCATGC 1 cut(s) 1103
PaeR7I CTCGAG 1 cut(s) 1160
PceI AGGCCT 1 cut(s) 1268
PcsI WCGNNNNNNNCGW 1 cut(s) 2490
PdmI GAANNNNTTC 1 cut(s) 686
PflFI GACNNNGTC 1 cut(s) 1471
PfoI TCCNGGA 2 cut(s) 411, 1830
PleI GAGTC 9 cut(s) 820, 873, 1195, 1229, 1441, 1576, 1621, 2723, 2765
PmaCI CACGTG 1 cut(s) 1604
PmlI CACGTG 1 cut(s) 1604
PpsI GAGTC 9 cut(s) 820, 873, 1195, 1229, 1441, 1576, 1621, 2723, 2765
Ppu21I YACGTR 2 cut(s) 844, 1604
PpuMI RGGWCCY 2 cut(s) 1761, 1828
PshAI GACNNNNGTC 1 cut(s) 455
Psp124BI GAGCTC 1 cut(s) 930
Psp5II RGGWCCY 2 cut(s) 1761, 1828
Psp6I CCWGG 6 cut(s) 411, 704, 1662, 1830, 2187, 2195
PspCI CACGTG 1 cut(s) 1604
PspGI CCWGG 6 cut(s) 411, 704, 1662, 1830, 2187, 2195
PspN4I GGNNCC 3 cut(s) 964, 965, 2193
PspOMI GGGCCC 1 cut(s) 963
PspPI GGNCC 5 cut(s) 963, 964, 1761, 1828, 2191
PspPPI RGGWCCY 2 cut(s) 1761, 1828
PstNI CAGNNNCTG 1 cut(s) 668
PsuI RGATCY 1 cut(s) 31
PsyI GACNNNGTC 1 cut(s) 1471
PvuII CAGCTG 5 cut(s) 297, 649, 668, 1247, 1654
RseI CAYNNNNRTG 1 cut(s) 1551
SacI GAGCTC 1 cut(s) 930
SaqAI TTAA 7 cut(s) 243, 1040, 1173, 1194, 1905, 2094, 2261
Sau3AI GATC 7 cut(s) 31, 125, 291, 408, 1381, 1502, 2640
Sau96I GGNCC 5 cut(s) 963, 964, 1761, 1828, 2191
ScaI AGTACT 1 cut(s) 1449
SchI GAGTC 9 cut(s) 820, 874, 1195, 1229, 1442, 1576, 1622, 2723, 2765
ScrFI CCNGG 8 cut(s) 413, 706, 919, 1664, 1832, 2189, 2197, 2612
SduI GDGCHC 6 cut(s) 17, 930, 967, 2016, 2233, 2612
SfaNI GCATC 3 cut(s) 481, 1312, 1967
Sfr274I CTCGAG 1 cut(s) 1160
SinI GGWCC 2 cut(s) 1761, 1828
SlaI CTCGAG 1 cut(s) 1160
SmiMI CAYNNNNRTG 1 cut(s) 1551
SmlI CTYRAG 7 cut(s) 218, 278, 1028, 1160, 1904, 2117, 2773
SmoI CTYRAG 7 cut(s) 218, 278, 1028, 1160, 1904, 2117, 2773
SphI GCATGC 1 cut(s) 1103
SseBI AGGCCT 1 cut(s) 1268
SsiI CCGC 6 cut(s) 343, 1295, 1942, 2410, 2453, 2462
SspMI CTAG 4 cut(s) 989, 1332, 1409, 1923
SstI GAGCTC 1 cut(s) 930
StuI AGGCCT 1 cut(s) 1268
StyD4I CCNGG 8 cut(s) 411, 704, 917, 1662, 1830, 2187, 2195, 2610
StyI CCWWGG 1 cut(s) 1563
TaiI ACGT 6 cut(s) 322, 846, 1606, 1848, 2204, 2230
TaqI TCGA 5 cut(s) 775, 1161, 1233, 1791, 2032
TaqII GACCGA 1 cut(s) 2880
TatI WGTACW 4 cut(s) 1399, 1447, 2645, 2652
TauI GCSGC 1 cut(s) 2413
Tru1I TTAA 7 cut(s) 243, 1040, 1173, 1194, 1905, 2094, 2261
Tru9I TTAA 7 cut(s) 243, 1040, 1173, 1194, 1905, 2094, 2261
TscAI CASTG 6 cut(s) 217, 899, 1228, 1760, 2480, 2686
TseFI GTSAC 3 cut(s) 1473, 1567, 2202
Tsp45I GTSAC 3 cut(s) 1473, 1567, 2202
TspRI CASTG 6 cut(s) 217, 899, 1228, 1760, 2480, 2686
Tth111I GACNNNGTC 1 cut(s) 1471
Vha464I CTTAAG 1 cut(s) 1904
VpaK11BI GGWCC 2 cut(s) 1761, 1828
XapI RAATTY 4 cut(s) 169, 543, 782, 1785
XceI RCATGY 2 cut(s) 402, 1103
XcmI CCANNNNNNNNNTGG 2 cut(s) 25, 1828
XhoI CTCGAG 1 cut(s) 1160
XmiI GTMKAC 2 cut(s) 2044, 2823
XmnI GAANNNNTTC 1 cut(s) 686
XspI CTAG 4 cut(s) 989, 1332, 1409, 1923
ZraI GACGTC 1 cut(s) 2202
ZrmI AGTACT 1 cut(s) 1449
Zsp2I ATGCAT 1 cut(s) 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.