Peptidyl-prolyl cis-trans isomerase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g24280 |
| rosa_multiflora | Rmu_co8355393.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 359 |
| AciI | CCGC | 1 cut(s) | 145 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 144, 359 |
| AgsI | TTSAA | 4 cut(s) | 33, 193, 323, 331 |
| AluBI | AGCT | 6 cut(s) | 109, 135, 177, 182, 327, 379 |
| AluI | AGCT | 6 cut(s) | 109, 135, 177, 182, 327, 379 |
| Alw21I | GWGCWC | 1 cut(s) | 137 |
| Alw26I | GTCTC | 2 cut(s) | 162, 195 |
| AoxI | GGCC | 3 cut(s) | 11, 57, 280 |
| ApeKI | GCWGC | 1 cut(s) | 314 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 215, 247 |
| AspLEI | GCGC | 1 cut(s) | 87 |
| AspS9I | GGNCC | 1 cut(s) | 58 |
| BanII | GRGCYC | 1 cut(s) | 137 |
| BbsI | GAAGAC | 2 cut(s) | 155, 258 |
| Bbv12I | GWGCWC | 1 cut(s) | 137 |
| BbvI | GCAGC | 1 cut(s) | 301 |
| BccI | CCATC | 2 cut(s) | 49, 353 |
| BcoDI | GTCTC | 2 cut(s) | 162, 195 |
| BfaI | CTAG | 1 cut(s) | 206 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BisI | GCNGC | 1 cut(s) | 315 |
| BlpI | GCTNAGC | 1 cut(s) | 178 |
| BlsI | GCNGC | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 1 cut(s) | 58 |
| BmiI | GGNNCC | 1 cut(s) | 351 |
| BmrI | ACTGGG | 1 cut(s) | 256 |
| BmuI | ACTGGG | 1 cut(s) | 256 |
| BpiI | GAAGAC | 2 cut(s) | 155, 258 |
| BpmI | CTGGAG | 1 cut(s) | 362 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 178 |
| BsaAI | YACGTR | 1 cut(s) | 91 |
| BsaI | GGTCTC | 1 cut(s) | 195 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 144, 359 |
| Bse1I | ACTGG | 2 cut(s) | 251, 345 |
| Bse3DI | GCAATG | 1 cut(s) | 236 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 144, 359 |
| BseMI | GCAATG | 1 cut(s) | 236 |
| BseMII | CTCAG | 2 cut(s) | 173, 192 |
| BseNI | ACTGG | 2 cut(s) | 251, 345 |
| BseRI | GAGGAG | 1 cut(s) | 127 |
| BseXI | GCAGC | 1 cut(s) | 301 |
| BseYI | CCCAGC | 1 cut(s) | 102 |
| BshFI | GGCC | 3 cut(s) | 13, 59, 282 |
| BsiHKAI | GWGCWC | 1 cut(s) | 137 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 144, 359 |
| BsmAI | GTCTC | 2 cut(s) | 162, 195 |
| BsnI | GGCC | 3 cut(s) | 13, 59, 282 |
| Bso31I | GGTCTC | 1 cut(s) | 195 |
| Bsp1286I | GDGCHC | 1 cut(s) | 137 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 178 |
| BspACI | CCGC | 1 cut(s) | 145 |
| BspANI | GGCC | 3 cut(s) | 13, 59, 282 |
| BspCNI | CTCAG | 2 cut(s) | 172, 191 |
| BspLI | GGNNCC | 1 cut(s) | 351 |
| BspMAI | CTGCAG | 1 cut(s) | 319 |
| BspTNI | GGTCTC | 1 cut(s) | 195 |
| BsrDI | GCAATG | 1 cut(s) | 236 |
| BsrI | ACTGG | 2 cut(s) | 251, 345 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssT1I | CCWWGG | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| BstBAI | YACGTR | 1 cut(s) | 91 |
| BstDEI | CTNAG | 4 cut(s) | 62, 159, 178, 390 |
| BstEII | GGTNACC | 1 cut(s) | 400 |
| BstHHI | GCGC | 1 cut(s) | 87 |
| BstMAI | GTCTC | 2 cut(s) | 162, 195 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 10 |
| BstPI | GGTNACC | 1 cut(s) | 400 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstV1I | GCAGC | 1 cut(s) | 301 |
| BstV2I | GAAGAC | 2 cut(s) | 155, 258 |
| BsuRI | GGCC | 3 cut(s) | 13, 59, 282 |
| BtsIMutI | CAGTG | 2 cut(s) | 225, 338 |
| CfoI | GCGC | 1 cut(s) | 87 |
| Cfr13I | GGNCC | 1 cut(s) | 58 |
| CseI | GACGC | 1 cut(s) | 320 |
| DdeI | CTNAG | 4 cut(s) | 62, 159, 178, 390 |
| Ecl136II | GAGCTC | 1 cut(s) | 135 |
| Eco130I | CCWWGG | 1 cut(s) | 277 |
| Eco24I | GRGCYC | 1 cut(s) | 137 |
| Eco31I | GGTCTC | 1 cut(s) | 195 |
| Eco53kI | GAGCTC | 1 cut(s) | 135 |
| Eco91I | GGTNACC | 1 cut(s) | 400 |
| EcoICRI | GAGCTC | 1 cut(s) | 135 |
| EcoO65I | GGTNACC | 1 cut(s) | 400 |
| EcoT14I | CCWWGG | 1 cut(s) | 277 |
| EcoT38I | GRGCYC | 1 cut(s) | 137 |
| ErhI | CCWWGG | 1 cut(s) | 277 |
| FaiI | YATR | 6 cut(s) | 51, 98, 100, 291, 293, 424 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 389, 421 |
| Fnu4HI | GCNGC | 1 cut(s) | 315 |
| FriOI | GRGCYC | 1 cut(s) | 137 |
| Fsp4HI | GCNGC | 1 cut(s) | 315 |
| FspBI | CTAG | 1 cut(s) | 206 |
| GlaI | GCGC | 1 cut(s) | 86 |
| GluI | GCNGC | 1 cut(s) | 315 |
| GsaI | CCCAGC | 1 cut(s) | 106 |
| GsuI | CTGGAG | 1 cut(s) | 362 |
| HaeIII | GGCC | 3 cut(s) | 13, 59, 282 |
| HgaI | GACGC | 1 cut(s) | 320 |
| HhaI | GCGC | 1 cut(s) | 87 |
| Hin6I | GCGC | 1 cut(s) | 85 |
| HinP1I | GCGC | 1 cut(s) | 85 |
| HindIII | AAGCTT | 1 cut(s) | 325 |
| Hpy188I | TCNGA | 1 cut(s) | 162 |
| Hpy188III | TCNNGA | 2 cut(s) | 33, 331 |
| HpyAV | CCTTC | 3 cut(s) | 256, 391, 421 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 1 cut(s) | 90 |
| HpyCH4V | TGCA | 2 cut(s) | 236, 317 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 10 |
| HpyF3I | CTNAG | 4 cut(s) | 62, 159, 178, 390 |
| HpySE526I | ACGT | 1 cut(s) | 90 |
| HspAI | GCGC | 1 cut(s) | 85 |
| LmnI | GCTCC | 3 cut(s) | 106, 140, 212 |
| LpnPI | CCDG | 6 cut(s) | 88, 95, 232, 296, 326, 368 |
| Lsp1109I | GCAGC | 1 cut(s) | 301 |
| MaeI | CTAG | 1 cut(s) | 206 |
| MaeII | ACGT | 1 cut(s) | 90 |
| MaeIII | GTNAC | 2 cut(s) | 242, 400 |
| MboII | GAAGA | 5 cut(s) | 125, 137, 160, 263, 406 |
| MhlI | GDGCHC | 1 cut(s) | 137 |
| MluCI | AATT | 3 cut(s) | 117, 194, 366 |
| MmeI | TCCRAC | 2 cut(s) | 201, 327 |
| MnlI | CCTC | 2 cut(s) | 148, 356 |
| MseI | TTAA | 2 cut(s) | 8, 369 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 10 |
| NlaIV | GGNNCC | 1 cut(s) | 351 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| PflFI | GACNNNGTC | 1 cut(s) | 154 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 359 |
| PkrI | GCNGC | 1 cut(s) | 316 |
| Ppu21I | YACGTR | 1 cut(s) | 91 |
| Psp124BI | GAGCTC | 1 cut(s) | 137 |
| PspEI | GGTNACC | 1 cut(s) | 400 |
| PspFI | CCCAGC | 1 cut(s) | 102 |
| PspN4I | GGNNCC | 1 cut(s) | 351 |
| PspPI | GGNCC | 1 cut(s) | 58 |
| PstI | CTGCAG | 1 cut(s) | 319 |
| PsyI | GACNNNGTC | 1 cut(s) | 154 |
| SacI | GAGCTC | 1 cut(s) | 137 |
| SaqAI | TTAA | 2 cut(s) | 8, 369 |
| SatI | GCNGC | 1 cut(s) | 315 |
| Sau96I | GGNCC | 1 cut(s) | 58 |
| SduI | GDGCHC | 1 cut(s) | 137 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| Sse9I | AATT | 3 cut(s) | 117, 194, 366 |
| SsiI | CCGC | 1 cut(s) | 145 |
| SspMI | CTAG | 1 cut(s) | 206 |
| SstI | GAGCTC | 1 cut(s) | 137 |
| StyI | CCWWGG | 1 cut(s) | 277 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaiI | ACGT | 1 cut(s) | 93 |
| TasI | AATT | 3 cut(s) | 117, 194, 366 |
| Tru1I | TTAA | 2 cut(s) | 8, 369 |
| Tru9I | TTAA | 2 cut(s) | 8, 369 |
| TscAI | CASTG | 2 cut(s) | 232, 345 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| TseI | GCWGC | 1 cut(s) | 314 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 1 cut(s) | 138 |
| TspGWI | ACGGA | 1 cut(s) | 225 |
| TspRI | CASTG | 2 cut(s) | 232, 345 |
| Tth111I | GACNNNGTC | 1 cut(s) | 154 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 359 |
| XspI | CTAG | 1 cut(s) | 206 |