pycom15g32310

glycerol-3-phosphate acyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
31267519 .. 31269447
1929 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1614 bp
ATGTCTGGAAATCTATGCTCCCTAGAAGCACTTTCCTCCTCTTTCCAAGTCCACAGCAAACCAAGCAACATATCATCATCCCCTCCAGAACACAAAGCCAGCCAGCCCCATGCAACCCACTTCAACTTTCAGAAGTTCAAAACCCTTGCTCAAAAGGCAAAAGTGCTTTCAAACAAAACAGTGCTTTTCCACTTTGAGGAAGCACTTTTGAAGTCATCAGCTTCACTGTTTCCTTACTTCCTGCTTGTGGCCTTTGAGGCTGGAGGGCTTTTGAGAGCTATGATCTTGTTTCTCTTGAGCCCTCTAGTTTTTTTGGTTGGTGGAGAGTTAGGCCTAAATATTATGGTTTTTTTGTGCTTTTGTGGGATTAGGAAGGATAGGATGAGGGTTGGGACAGCTGTCCTGCCCAAGTTCTTTTTGGAGGATGTTGGGAGTGAAGGGCTTGATGTGGTGATGAGATGTGGGAAAAAAGTGGGAGTGAGTGAGTTGCCTAGGGTGATGGTTGAAGGGTTGTTGAAGGATTATGTCGGGGTTGATGTTGTTGTTGCAAGAGAGCTAAAAGTTGTTGCTGGATACTTTGTGGGGTTGATGGAGGAAAAAAAGACTAACTGTTTTGATCCAAATGTAATTTTTGGAGAGGAGATCAAGACAGATTCTCAAACTATTGGCATAATTGGTTGCCAAGATAGTTTTTTGCAGCATGAGCAACTCTTTTCTCATTGCAAGGATGAGATTTACATGGTGACCGAAGCTGAGAAGCAAAACTGGAAAACCCTAGCAAAACAAAAATACCCAAAACCCTTGATTTTCCATGATGGAAGATTGGCCTTCTTCCCAACCCCAGCAGCCACCTTAGCCATGTTCATGTACTTCCCTCTAGGAATTTTCATCTGCATCATAAGATTCGTCACTGGCATTTTTCTCCCTCACAGCATTTCCTCTCCAATCTTGGCCTTCACAGGCACAATCACCACAATTTCAAAACCCAAATCCCCAATTTCCCTAACAAATGATGCCCAAAAACAAAGGGGAAGACTTTATGTCTGCAACCATAGAACCCTCCTAGATCCACCCTATGTCCAACTAGCCATTGACAAATCCCTCTCTGCTGTCACATACAGTTTGAGCAAAGTCAATGAGAAAATTGCCCCGATGAAAACCATCGGATTAACCAGAGATAGAGAGAGAGACGCAAAAACAATGGAGAAACTGTTGCAACAAGGAGACCTTGTGGTTTGCCCAGAAGGAACAACATGCCGAGAGCCATATTTGTTGAGGTTCAGCCCTTTGTTTGCAGAGCTCACTGATGACATTGTTCCTGTAGCCATTGATGTGAAAGTAAATATGTTTTATGGTACATGTGCTAGTGGGTTCAAAAGTTTGGATCCAGTTTTTCATTTCATGAATCCACATCCTGTTTACACCCTCCAGCTCCTTGATAAACTGCCTGAACAAGAAACACGCAATCTTGGAGGGAAATCAAGGTTTGAAGTTGCCAATCATGTACAAAATGAGATAGGCAAGGCTTTAGGGTTTGAGAGCACCGGTCTCACAAGGAAAGATAAGTATATGGTGTTGGCAGGTAATGATGGGAGCTTGAAAAGCTCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

538

Amino Acids

59.78

Weight (kDa)

8.74

Isoelectric Point (pI)

32.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HAD_RAM2_N PF23270 60 - 245 8e-62 Glycerol-3-phosphate acyltransferase RAM2-like, HAD-like domain
Acyltransferase PF01553 338 - 443 3.3e-07 Acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014754)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1571
AclWI GGATC 4 cut(s) 611, 1061, 1379, 1392
AcsI RAATTY 1 cut(s) 882
AfaI GTAC 3 cut(s) 869, 1357, 1506
AfiI CCNNNNNNNGG 2 cut(s) 196, 247
AflIII ACRYGT 1 cut(s) 1358
AgeI ACCGGT 1 cut(s) 1544
AhdI GACNNNNNGTC 1 cut(s) 1040
AluBI AGCT 9 cut(s) 221, 278, 398, 556, 752, 1300, 1432, 1596, 1605
AluI AGCT 9 cut(s) 221, 278, 398, 556, 752, 1300, 1432, 1596, 1605
Alw21I GWGCWC 2 cut(s) 1302, 1544
Alw26I GTCTC 3 cut(s) 1182, 1218, 1553
AlwI GGATC 4 cut(s) 611, 1061, 1379, 1392
AoxI GGCC 4 cut(s) 249, 331, 825, 951
ApeKI GCWGC 2 cut(s) 697, 845
ApoI RAATTY 1 cut(s) 882
AsiGI ACCGGT 1 cut(s) 1544
AspA2I CCTAGG 1 cut(s) 491
AsuHPI GGTGA 4 cut(s) 463, 508, 754, 961
AvrII CCTAGG 1 cut(s) 491
BamHI GGATCC 1 cut(s) 1384
BanII GRGCYC 2 cut(s) 302, 1302
BbsI GAAGAC 1 cut(s) 1039
Bbv12I GWGCWC 2 cut(s) 1302, 1544
BbvI GCAGC 2 cut(s) 709, 857
BccI CCATC 5 cut(s) 493, 583, 809, 1169, 1583
BciVI GTATCC 1 cut(s) 566
BcoDI GTCTC 3 cut(s) 1182, 1218, 1553
BfaI CTAG 8 cut(s) 23, 305, 492, 776, 878, 1064, 1085, 1365
BfmI CTRYAG 1 cut(s) 1320
BfuAI ACCTGC 1 cut(s) 1571
BfuI GTATCC 1 cut(s) 566
BglI GCCNNNNNGGC 1 cut(s) 257
BisI GCNGC 2 cut(s) 698, 846
BlnI CCTAGG 1 cut(s) 491
BlsI GCNGC 2 cut(s) 699, 847
BmeRI GACNNNNNGTC 1 cut(s) 1040
BmiI GGNNCC 1 cut(s) 1386
BmsI GCATC 2 cut(s) 903, 1003
BoxI GACNNNNGTC 1 cut(s) 398
BpiI GAAGAC 1 cut(s) 1039
BpmI CTGGAG 3 cut(s) 69, 282, 1412
Bpu10I CCTNAGC 1 cut(s) 853
BpuEI CTTGAG 2 cut(s) 316, 1591
BsaI GGTCTC 2 cut(s) 1218, 1553
BsaJI CCNNGG 1 cut(s) 491
BsaWI WCCGGW 1 cut(s) 1544
BsaXI ACNNNNNCTCC 4 cut(s) 1196, 1215, 1226, 1245
Bsc4I CCNNNNNNNGG 2 cut(s) 196, 247
Bse118I RCCGGY 1 cut(s) 1544
Bse1I ACTGG 3 cut(s) 770, 916, 1388
Bse3DI GCAATG 1 cut(s) 718
BseDI CCNNGG 1 cut(s) 491
BseGI GGATG 5 cut(s) 77, 387, 430, 733, 1411
BseLI CCNNNNNNNGG 2 cut(s) 196, 247
BseMI GCAATG 1 cut(s) 718
BseMII CTCAG 1 cut(s) 744
BseNI ACTGG 3 cut(s) 770, 916, 1388
BseRI GAGGAG 2 cut(s) 28, 653
BseXI GCAGC 2 cut(s) 709, 857
BseYI CCCAGC 1 cut(s) 841
BshFI GGCC 4 cut(s) 251, 333, 827, 953
BshTI ACCGGT 1 cut(s) 1544
BsiHKAI GWGCWC 2 cut(s) 1302, 1544
BsiSI CCGG 1 cut(s) 1545
BslFI GGGAC 1 cut(s) 406
BslI CCNNNNNNNGG 2 cut(s) 196, 247
BsmAI GTCTC 3 cut(s) 1182, 1218, 1553
BsmBI CGTCTC 1 cut(s) 1182
BsmFI GGGAC 1 cut(s) 406
BsnI GGCC 4 cut(s) 251, 333, 827, 953
Bso31I GGTCTC 2 cut(s) 1218, 1553
Bsp1286I GDGCHC 3 cut(s) 302, 1302, 1544
Bsp1407I TGTACA 1 cut(s) 1504
Bsp143I GATC 5 cut(s) 282, 616, 642, 1066, 1384
BspANI GGCC 4 cut(s) 251, 333, 827, 953
BspCNI CTCAG 1 cut(s) 745
BspHI TCATGA 1 cut(s) 1401
BspLI GGNNCC 1 cut(s) 1386
BspMI ACCTGC 1 cut(s) 1571
BspPI GGATC 4 cut(s) 611, 1061, 1379, 1392
BspTNI GGTCTC 2 cut(s) 1218, 1553
BsrDI GCAATG 1 cut(s) 718
BsrFI RCCGGY 1 cut(s) 1544
BsrGI TGTACA 1 cut(s) 1504
BsrI ACTGG 3 cut(s) 770, 916, 1388
BssAI RCCGGY 1 cut(s) 1544
BssECI CCNNGG 1 cut(s) 491
BssMI GATC 5 cut(s) 282, 616, 642, 1066, 1384
BssT1I CCWWGG 1 cut(s) 491
Bst4CI ACNGT 5 cut(s) 181, 228, 611, 1121, 1212
BstAUI TGTACA 1 cut(s) 1504
BstC8I GCNNGC 2 cut(s) 100, 104
BstDEI CTNAG 2 cut(s) 753, 853
BstEII GGTNACC 1 cut(s) 742
BstF5I GGATG 5 cut(s) 77, 387, 430, 733, 1411
BstKTI GATC 5 cut(s) 285, 619, 645, 1069, 1387
BstMAI GTCTC 3 cut(s) 1182, 1218, 1553
BstMBI GATC 5 cut(s) 282, 616, 642, 1066, 1384
BstMWI GCNNNNNNNGC 6 cut(s) 63, 155, 257, 703, 854, 1602
BstNSI RCATGY 2 cut(s) 1257, 1362
BstPAI GACNNNNGTC 1 cut(s) 398
BstPI GGTNACC 1 cut(s) 742
BstSFI CTRYAG 1 cut(s) 1320
BstV1I GCAGC 2 cut(s) 709, 857
BstV2I GAAGAC 1 cut(s) 1039
BstX2I RGATCY 2 cut(s) 1066, 1384
BstYI RGATCY 2 cut(s) 1066, 1384
BsuI GTATCC 1 cut(s) 566
BsuRI GGCC 4 cut(s) 251, 333, 827, 953
BtsCI GGATG 5 cut(s) 77, 387, 430, 733, 1411
BtsIMutI CAGTG 4 cut(s) 186, 224, 909, 1302
BveI ACCTGC 1 cut(s) 1571
Cac8I GCNNGC 2 cut(s) 100, 104
CciI TCATGA 1 cut(s) 1401
Cfr10I RCCGGY 1 cut(s) 1544
CseI GACGC 1 cut(s) 1199
Csp6I GTAC 3 cut(s) 868, 1356, 1505
CspAI ACCGGT 1 cut(s) 1544
CviQI GTAC 3 cut(s) 868, 1356, 1505
DdeI CTNAG 2 cut(s) 753, 853
DpnI GATC 5 cut(s) 284, 618, 644, 1068, 1386
DpnII GATC 5 cut(s) 282, 616, 642, 1066, 1384
DriI GACNNNNNGTC 1 cut(s) 1040
Eam1105I GACNNNNNGTC 1 cut(s) 1040
Ecl136II GAGCTC 1 cut(s) 1300
Eco130I CCWWGG 1 cut(s) 491
Eco147I AGGCCT 1 cut(s) 333
Eco24I GRGCYC 2 cut(s) 302, 1302
Eco31I GGTCTC 2 cut(s) 1218, 1553
Eco53kI GAGCTC 1 cut(s) 1300
Eco91I GGTNACC 1 cut(s) 742
EcoICRI GAGCTC 1 cut(s) 1300
EcoO65I GGTNACC 1 cut(s) 742
EcoT14I CCWWGG 1 cut(s) 491
EcoT38I GRGCYC 2 cut(s) 302, 1302
ErhI CCWWGG 1 cut(s) 491
Esp3I CGTCTC 1 cut(s) 1182
FalI AAGNNNNNCTT 2 cut(s) 1212, 1244
FaqI GGGAC 1 cut(s) 406
Fnu4HI GCNGC 2 cut(s) 698, 846
FokI GGATG 5 cut(s) 64, 394, 437, 740, 1398
FriOI GRGCYC 2 cut(s) 302, 1302
Fsp4HI GCNGC 2 cut(s) 698, 846
FspBI CTAG 8 cut(s) 23, 305, 492, 776, 878, 1064, 1085, 1365
GluI GCNGC 2 cut(s) 698, 846
GsaI CCCAGC 1 cut(s) 845
GsuI CTGGAG 3 cut(s) 69, 282, 1412
HaeIII GGCC 4 cut(s) 251, 333, 827, 953
HapII CCGG 1 cut(s) 1545
HgaI GACGC 1 cut(s) 1199
HinfI GANTC 3 cut(s) 653, 903, 1405
HpaII CCGG 1 cut(s) 1545
HphI GGTGA 4 cut(s) 463, 508, 754, 961
Hpy166II GTNNAC 2 cut(s) 52, 1420
Hpy188I TCNGA 2 cut(s) 132, 1166
Hpy188III TCNNGA 5 cut(s) 6, 86, 295, 646, 1402
Hpy8I GTNNAC 2 cut(s) 52, 1420
HpyAV CCTTC 7 cut(s) 367, 431, 500, 511, 838, 964, 1238
HpyCH4III ACNGT 5 cut(s) 181, 228, 611, 1121, 1212
HpyCH4V TGCA 8 cut(s) 113, 548, 697, 723, 894, 1047, 1216, 1295
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 155, 257, 703, 854, 1602
HpyF3I CTNAG 2 cut(s) 753, 853
Kzo9I GATC 5 cut(s) 282, 616, 642, 1066, 1384
LmnI GCTCC 3 cut(s) 23, 1437, 1593
Lsp1109I GCAGC 2 cut(s) 709, 857
LweI GCATC 2 cut(s) 903, 1003
MaeI CTAG 8 cut(s) 23, 305, 492, 776, 878, 1064, 1085, 1365
MaeIII GTNAC 3 cut(s) 742, 907, 1111
MalI GATC 5 cut(s) 284, 618, 644, 1068, 1386
MboI GATC 5 cut(s) 282, 616, 642, 1066, 1384
MboII GAAGA 3 cut(s) 823, 831, 1044
MflI RGATCY 2 cut(s) 1066, 1384
MhlI GDGCHC 3 cut(s) 302, 1302, 1544
MluCI AATT 6 cut(s) 627, 672, 882, 975, 996, 1143
MmeI TCCRAC 1 cut(s) 1105
MseI TTAA 1 cut(s) 1169
MslI CAYNNNNRTG 2 cut(s) 863, 1331
MspA1I CMGCKG 1 cut(s) 398
MspI CCGG 1 cut(s) 1545
MwoI GCNNNNNNNGC 6 cut(s) 63, 155, 257, 703, 854, 1602
NdeII GATC 5 cut(s) 282, 616, 642, 1066, 1384
NlaIV GGNNCC 1 cut(s) 1386
NmeAIII GCCGAG 1 cut(s) 1283
NmuCI GTSAC 3 cut(s) 742, 907, 1111
NspI RCATGY 2 cut(s) 1257, 1362
PagI TCATGA 1 cut(s) 1401
PceI AGGCCT 1 cut(s) 333
PciI ACATGT 1 cut(s) 1358
PfeI GAWTC 3 cut(s) 653, 903, 1405
PinAI ACCGGT 1 cut(s) 1544
PkrI GCNGC 2 cut(s) 699, 847
PscI ACATGT 1 cut(s) 1358
PshAI GACNNNNGTC 1 cut(s) 398
Psp124BI GAGCTC 1 cut(s) 1302
PspEI GGTNACC 1 cut(s) 742
PspFI CCCAGC 1 cut(s) 841
PspN4I GGNNCC 1 cut(s) 1386
PsuI RGATCY 2 cut(s) 1066, 1384
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 3 cut(s) 869, 1357, 1506
RsaNI GTAC 3 cut(s) 868, 1356, 1505
RseI CAYNNNNRTG 2 cut(s) 863, 1331
SacI GAGCTC 1 cut(s) 1302
SaqAI TTAA 1 cut(s) 1169
SatI GCNGC 2 cut(s) 698, 846
Sau3AI GATC 5 cut(s) 282, 616, 642, 1066, 1384
SduI GDGCHC 3 cut(s) 302, 1302, 1544
SfaNI GCATC 2 cut(s) 903, 1003
SfcI CTRYAG 1 cut(s) 1320
SmiMI CAYNNNNRTG 2 cut(s) 863, 1331
SmlI CTYRAG 2 cut(s) 295, 1606
SmoI CTYRAG 2 cut(s) 295, 1606
Sse9I AATT 6 cut(s) 627, 672, 882, 975, 996, 1143
SseBI AGGCCT 1 cut(s) 333
SspI AATATT 1 cut(s) 340
SspMI CTAG 8 cut(s) 23, 305, 492, 776, 878, 1064, 1085, 1365
SstI GAGCTC 1 cut(s) 1302
StuI AGGCCT 1 cut(s) 333
StyI CCWWGG 1 cut(s) 491
TaaI ACNGT 5 cut(s) 181, 228, 611, 1121, 1212
TaqII GACCGA 1 cut(s) 761
TasI AATT 6 cut(s) 627, 672, 882, 975, 996, 1143
TatI WGTACW 2 cut(s) 867, 1504
TfiI GAWTC 3 cut(s) 653, 903, 1405
Tru1I TTAA 1 cut(s) 1169
Tru9I TTAA 1 cut(s) 1169
TscAI CASTG 4 cut(s) 186, 231, 916, 1309
TseFI GTSAC 3 cut(s) 742, 907, 1111
TseI GCWGC 2 cut(s) 697, 845
Tsp45I GTSAC 3 cut(s) 742, 907, 1111
TspDTI ATGAA 6 cut(s) 853, 877, 1169, 1385, 1390, 1418
TspRI CASTG 4 cut(s) 186, 231, 916, 1309
XapI RAATTY 1 cut(s) 882
XceI RCATGY 2 cut(s) 1257, 1362
XcmI CCANNNNNNNNNTGG 1 cut(s) 415
XmaJI CCTAGG 1 cut(s) 491
XspI CTAG 8 cut(s) 23, 305, 492, 776, 878, 1064, 1085, 1365
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.