pycom16g05980

Histidine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0022566
Physical Location & Seq
Forward (+)
3823154 .. 3828467
5314 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1827 bp
ATGAGTTTCTTCCCTGTATTTGGGTTCGGTTTGAAGGTGGGGTGTCTGTTTTGGATGCTATGTTGCTCGATTATATTTGTAATTTACATGAACTGGTACCTCACTGATGGGATTGTGACAGACACCAAGCTACGTTTGCTTGGTGAAGCTGCCAATATGTGCCTCAAATGGTGGAAGAAAATCCCACTGAACATCAGCAAGACCCGCCAGCATTACTACCAGTATATCGGGCTGAAGAGAGTCCGAAAAACGTGGTGGAGGAAGCTTGTGTTTTTGTGGGTGGTTGGGTGGACAATTGTGAGCCTCTGGATCTTCCCGTTCATCAGCTCACAGGCCAGTGAGAAGAAGAAGGTGACTCTTGAAAGGATGTGTGATGAGAGGGCGAGGATGTTGGAGGATCAATTTAATGTCAGCATGAATCATATTCAGGCCATGTCGATGCTGATCTCGACATTCCACGACGGAAAGTACCCTTCGGCCATTGATCAGAAAACTTTTGCGCGGTACATTGAAGGAACTGCTTTCGAGAGACCCCTCACAAGCGGCGTGGCATATGCTGTAAGGGTGCTCCGCTCGGAAAAAGAAGAATTTGAGAAGCAGCAGGGCTGGACTATCAAGAGAATGGATACCCTCGAACAAAGCCTGGTTCATAAGAATGACTATGCCCCAGAAGCCTTGGAACCTTTCCCAGTTCAGGAAGAATATGCTCCTGTTATATTTGCACAGGATACCATTAAACATGTCATCTCTTTTGATATGCTGTCCGGGAAGGAAGATCGACAAAACGTGTTGCGTGCAAGAGAATCAGGAAAGGGGGTTCTAACTGCTCCTTTTCGGCTGCTTAAAACAAAGAGACTTGGAGTAATACTGACGTTTGCCGTCTACAAAAGCTATCTGCCCTCAAATGCAACTCCAAATGAAAGAATTCAAGCGACTGTTGGGTATCTCGGTGGAGTCTTTCATATTGAGTCACTAGTGGAGAAGTTACTTCAACAACTCGCTAGCAAGCAAACCATCCTTGTGAACGTGTATGACACAACCAATCAGTCGCATCCAATCAGGATGTATGGTTCAAATGTGTCGGATGATGGATTGCAGCACATCAGCTCCTTAAGTTTTGGAGATCCCTTAAGGAACCATGAGATGCGGTGCAGGTTCAAACATAAGCCACCATGGCCGTGGTTGGCCATTACGACTAACATTAGGATCCTCACAATTGCATTGCTTGTTGGCTACATTTTCTATGCAACTGTAAACAGGATTGCCAACGTGGAGAATGATTTCCATAACATGACGGAGCTCGAGAAACAGGCCAAGGCAGCTGAGATGATGGAGCTCAAGAAACAGGCCGAGGCAGCTGATATTGCCTATTTTCAGTTTCTTGCAACTGTATTTCACGGGATCAGAACCCAAGTGAATCATGTCCTAGGAAAGTCACAAATGCTAATGGACAAAAACCTGGATGATACTCAACTAGATTATATCCAAACTGCCCAGAGTTGTGGAAGACGTGTACTCTCACTTGCAAAAGGATTCCCGGAATCACTTGCAATTGGACTCCTGGACCCGAAGCTTGAGGCAGTGCGTTTTTATCTGCGACCTATTCTGGATGATGTTCTGTCCTGCTTTAAGACGGAGTATCATGAAAAAGTAGAGTGGGCGGTATACATCTCAGATCAGGTTCCTGATATGCTTATTGGTCGATCCCAGAAGGTTTCGGAATGTTATCACCAATCTCATGTGGAATTCAATCAAATTAACAGAGGAAGGACACATCTTTGTCACGGTTCATCTTGTCGAGGAGCTGATCGGCTCAATAGATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009266 GO:0009267 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009737 GO:0009743 GO:0009744 GO:0009755 GO:0009884 GO:0009888 GO:0009894 GO:0009909 GO:0009987 GO:0009991 GO:0010029 GO:0010033 GO:0010035 GO:0010087 GO:0010150 GO:0010271 GO:0010959 GO:0012505 GO:0016020 GO:0016036 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0018106 GO:0018193 GO:0018202 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031329 GO:0031667 GO:0031668 GO:0031669 GO:0031984 GO:0032501 GO:0032502 GO:0032870 GO:0032879 GO:0033554 GO:0033993 GO:0034285 GO:0034756 GO:0034757 GO:0036211 GO:0038023 GO:0040007 GO:0042175 GO:0042221 GO:0042594 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043269 GO:0043271 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048366 GO:0048367 GO:0048509 GO:0048519 GO:0048580 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051171 GO:0051193 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0070417 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071368 GO:0071396 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0080117 GO:0080190 GO:0090056 GO:0090693 GO:0097305 GO:0097306 GO:0098542 GO:0098827 GO:0099402 GO:0140096 GO:1900140 GO:1901401 GO:1901404 GO:1901564 GO:1901700 GO:1901701 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
CHASE HATPase_c HisKA Response_reg

Protein Analysis

609

Amino Acids

70.19

Weight (kDa)

9.02

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CHASE PF03924 160 - 356 1.6e-37 CHASE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0022566)

Species Orthologous Gene IDs
pyrus_communis pycom16g05980 pycom16g10330
rosa_multiflora Rmu_co8003014.1_g000001 Rmu_sc0011796.1_g000009

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1143
Acc65I GGTACC 1 cut(s) 96
AccB1I GGYRCC 1 cut(s) 96
AccBSI CCGCTC 1 cut(s) 573
AccI GTMKAC 2 cut(s) 882, 1665
AccII CGCG 1 cut(s) 502
AciI CCGC 6 cut(s) 205, 502, 543, 571, 1147, 1661
AclWI GGATC 7 cut(s) 317, 405, 1118, 1201, 1214, 1409, 1698
AcoI YGGCCR 3 cut(s) 477, 1175, 1185
AcsI RAATTY 3 cut(s) 587, 924, 1745
AcuI CTGAAG 1 cut(s) 254
AfaI GTAC 4 cut(s) 98, 470, 506, 1515
AfiI CCNNNNNNNGG 2 cut(s) 20, 694
AflII CTTAAG 2 cut(s) 1111, 1129
AflIII ACRYGT 4 cut(s) 739, 786, 1026, 1510
AgsI TTSAA 8 cut(s) 34, 362, 512, 929, 992, 1074, 1159, 1750
AhlI ACTAGT 1 cut(s) 973
AjiI CACGTC 1 cut(s) 1511
AjnI CCWGG 3 cut(s) 642, 1458, 1560
AloI GAACNNNNNNTCC 4 cut(s) 801, 833, 1054, 1086
Alw21I GWGCWC 3 cut(s) 570, 1302, 1338
Alw26I GTCTC 2 cut(s) 523, 847
AlwI GGATC 7 cut(s) 317, 405, 1118, 1201, 1214, 1409, 1698
Ama87I CYCGRG 1 cut(s) 1301
AoxI GGCC 7 cut(s) 333, 429, 477, 1175, 1185, 1311, 1347
ApeKI GCWGC 6 cut(s) 149, 598, 838, 1096, 1319, 1355
ApoI RAATTY 3 cut(s) 587, 924, 1745
Asp700I GAANNNNTTC 2 cut(s) 924, 1280
Asp718I GGTACC 1 cut(s) 96
AspA2I CCTAGG 1 cut(s) 1426
AspLEI GCGC 1 cut(s) 502
AspS9I GGNCC 1 cut(s) 1564
AsuC2I CCSGG 2 cut(s) 766, 1538
AsuHPI GGTGA 3 cut(s) 155, 364, 1721
AsuNHI GCTAGC 1 cut(s) 1001
AvaI CYCGRG 1 cut(s) 1301
AvaII GGWCC 1 cut(s) 1564
AvrII CCTAGG 1 cut(s) 1426
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 1 cut(s) 1206
BanI GGYRCC 1 cut(s) 96
BanII GRGCYC 2 cut(s) 1302, 1338
BbsI GAAGAC 1 cut(s) 1513
Bbv12I GWGCWC 3 cut(s) 570, 1302, 1338
BbvI GCAGC 6 cut(s) 136, 610, 825, 1108, 1331, 1367
BccI CCATC 4 cut(s) 101, 1022, 1082, 1324
BceAI ACGGC 2 cut(s) 863, 1162
BciT130I CCWGG 3 cut(s) 644, 1460, 1562
BciVI GTATCC 2 cut(s) 619, 721
BclI TGATCA 1 cut(s) 484
BcnI CCSGG 2 cut(s) 766, 1538
BcoDI GTCTC 2 cut(s) 523, 847
BcuI ACTAGT 1 cut(s) 973
BfaI CTAG 4 cut(s) 974, 1002, 1427, 1475
BfrI CTTAAG 2 cut(s) 1111, 1129
BfuAI ACCTGC 1 cut(s) 1143
BfuI GTATCC 2 cut(s) 619, 721
BglI GCCNNNNNGGC 1 cut(s) 1174
BisI GCNGC 7 cut(s) 150, 544, 599, 839, 1097, 1320, 1356
BlnI CCTAGG 1 cut(s) 1426
BlsI GCNGC 7 cut(s) 151, 545, 600, 840, 1098, 1321, 1357
Bme1390I CCNGG 5 cut(s) 644, 766, 1460, 1538, 1562
Bme18I GGWCC 1 cut(s) 1564
BmeT110I CYCGRG 1 cut(s) 1301
BmgBI CACGTC 1 cut(s) 1511
BmgT120I GGNCC 1 cut(s) 1564
BmiI GGNNCC 6 cut(s) 98, 681, 1136, 1208, 1566, 1683
BmrFI CCNGG 5 cut(s) 644, 766, 1460, 1538, 1562
BmrI ACTGGG 1 cut(s) 683
BmsI GCATC 4 cut(s) 45, 429, 1060, 1134
BmtI GCTAGC 1 cut(s) 1005
BmuI ACTGGG 1 cut(s) 683
BpiI GAAGAC 1 cut(s) 1513
BpuEI CTTGAG 2 cut(s) 1322, 1595
BpuMI CCSGG 2 cut(s) 766, 1538
BsaBI GATNNNNATC 1 cut(s) 443
BsaI GGTCTC 1 cut(s) 523
BsaJI CCNNGG 6 cut(s) 675, 1172, 1178, 1314, 1350, 1426
BsaXI ACNNNNNCTCC 2 cut(s) 1091, 1121
Bsc4I CCNNNNNNNGG 2 cut(s) 20, 694
Bse1I ACTGG 4 cut(s) 98, 220, 336, 689
Bse3DI GCAATG 1 cut(s) 1220
Bse8I GATNNNNATC 1 cut(s) 443
BseBI CCWGG 3 cut(s) 644, 1460, 1562
BseDI CCNNGG 6 cut(s) 675, 1172, 1178, 1314, 1350, 1426
BseGI GGATG 9 cut(s) 60, 372, 393, 1014, 1051, 1068, 1090, 1468, 1615
BseJI GATNNNNATC 1 cut(s) 443
BseLI CCNNNNNNNGG 2 cut(s) 20, 694
BseMI GCAATG 1 cut(s) 1220
BseMII CTCAG 2 cut(s) 1314, 1686
BseNI ACTGG 4 cut(s) 98, 220, 336, 689
BseRI GAGGAG 1 cut(s) 1815
BseXI GCAGC 6 cut(s) 136, 610, 825, 1108, 1331, 1367
BsgI GTGCAG 1 cut(s) 1171
Bsh1236I CGCG 1 cut(s) 502
BshFI GGCC 7 cut(s) 335, 431, 479, 1177, 1187, 1313, 1349
BshNI GGYRCC 1 cut(s) 96
BsiHKAI GWGCWC 3 cut(s) 570, 1302, 1338
BsiHKCI CYCGRG 1 cut(s) 1301
BsiSI CCGG 2 cut(s) 765, 1538
BslI CCNNNNNNNGG 2 cut(s) 20, 694
BsmAI GTCTC 2 cut(s) 523, 847
BsnI GGCC 7 cut(s) 335, 431, 479, 1177, 1187, 1313, 1349
Bso31I GGTCTC 1 cut(s) 523
BsoBI CYCGRG 1 cut(s) 1301
Bsp1286I GDGCHC 3 cut(s) 570, 1302, 1338
Bsp19I CCATGG 1 cut(s) 1172
BspACI CCGC 6 cut(s) 205, 502, 543, 571, 1147, 1661
BspANI GGCC 7 cut(s) 335, 431, 479, 1177, 1187, 1313, 1349
BspCNI CTCAG 2 cut(s) 1315, 1685
BspFNI CGCG 1 cut(s) 502
BspHI TCATGA 1 cut(s) 1642
BspLI GGNNCC 6 cut(s) 98, 681, 1136, 1208, 1566, 1683
BspMI ACCTGC 1 cut(s) 1143
BspOI GCTAGC 1 cut(s) 1005
BspPI GGATC 7 cut(s) 317, 405, 1118, 1201, 1214, 1409, 1698
BspT107I GGYRCC 1 cut(s) 96
BspTI CTTAAG 2 cut(s) 1111, 1129
BspTNI GGTCTC 1 cut(s) 523
BsrBI CCGCTC 1 cut(s) 573
BsrDI GCAATG 1 cut(s) 1220
BsrI ACTGG 4 cut(s) 98, 220, 336, 689
BssECI CCNNGG 6 cut(s) 675, 1172, 1178, 1314, 1350, 1426
BssNAI GTATAC 1 cut(s) 1666
BssT1I CCWWGG 4 cut(s) 675, 1172, 1314, 1426
Bst1107I GTATAC 1 cut(s) 1666
Bst2UI CCWGG 3 cut(s) 644, 1460, 1562
Bst4CI ACNGT 4 cut(s) 937, 1252, 1390, 1787
Bst6I CTCTTC 1 cut(s) 230
BstAFI CTTAAG 2 cut(s) 1111, 1129
BstC8I GCNNGC 4 cut(s) 209, 795, 1003, 1007
BstDEI CTNAG 2 cut(s) 1323, 1672
BstDSI CCRYGG 2 cut(s) 1172, 1178
BstF5I GGATG 9 cut(s) 60, 372, 393, 1014, 1051, 1068, 1090, 1468, 1615
BstFNI CGCG 1 cut(s) 502
BstHHI GCGC 1 cut(s) 502
BstMAI GTCTC 2 cut(s) 523, 847
BstMWI GCNNNNNNNGC 7 cut(s) 136, 204, 671, 1174, 1319, 1355, 1364
BstNI CCWGG 3 cut(s) 644, 1460, 1562
BstNSI RCATGY 1 cut(s) 743
BstSCI CCNGG 5 cut(s) 642, 764, 1458, 1536, 1560
BstUI CGCG 1 cut(s) 502
BstV1I GCAGC 6 cut(s) 136, 610, 825, 1108, 1331, 1367
BstV2I GAAGAC 1 cut(s) 1513
BstX2I RGATCY 3 cut(s) 309, 1123, 1206
BstXI CCANNNNNNTGG 2 cut(s) 1179, 1502
BstYI RGATCY 3 cut(s) 309, 1123, 1206
BstZ17I GTATAC 1 cut(s) 1666
BsuI GTATCC 2 cut(s) 619, 721
BsuRI GGCC 7 cut(s) 335, 431, 479, 1177, 1187, 1313, 1349
BtgI CCRYGG 2 cut(s) 1172, 1178
BtrI CACGTC 1 cut(s) 1511
BtsCI GGATG 9 cut(s) 60, 372, 393, 1014, 1051, 1068, 1090, 1468, 1615
BtsI GCAGTG 1 cut(s) 1587
BtsIMutI CAGTG 4 cut(s) 102, 185, 343, 1587
BveI ACCTGC 1 cut(s) 1143
Cac8I GCNNGC 4 cut(s) 209, 795, 1003, 1007
CciI TCATGA 1 cut(s) 1642
CfoI GCGC 1 cut(s) 502
Cfr13I GGNCC 1 cut(s) 1564
Csp6I GTAC 4 cut(s) 97, 469, 505, 1514
CspCI CAANNNNNGTGG 2 cut(s) 528, 563
CviQI GTAC 4 cut(s) 97, 469, 505, 1514
DdeI CTNAG 2 cut(s) 1323, 1672
EaeI YGGCCR 3 cut(s) 477, 1175, 1185
Eam1104I CTCTTC 1 cut(s) 230
EarI CTCTTC 1 cut(s) 230
Ecl136II GAGCTC 2 cut(s) 1300, 1336
Eco130I CCWWGG 4 cut(s) 675, 1172, 1314, 1426
Eco24I GRGCYC 2 cut(s) 1302, 1338
Eco31I GGTCTC 1 cut(s) 523
Eco47I GGWCC 1 cut(s) 1564
Eco53kI GAGCTC 2 cut(s) 1300, 1336
Eco57I CTGAAG 1 cut(s) 254
Eco88I CYCGRG 1 cut(s) 1301
EcoICRI GAGCTC 2 cut(s) 1300, 1336
EcoRI GAATTC 2 cut(s) 924, 1745
EcoRII CCWGG 3 cut(s) 642, 1458, 1560
EcoT14I CCWWGG 4 cut(s) 675, 1172, 1314, 1426
EcoT38I GRGCYC 2 cut(s) 1302, 1338
ErhI CCWWGG 4 cut(s) 675, 1172, 1314, 1426
FauI CCCGC 1 cut(s) 212
FauNDI CATATG 1 cut(s) 553
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 2 cut(s) 882, 1665
Fnu4HI GCNGC 7 cut(s) 150, 544, 599, 839, 1097, 1320, 1356
FokI GGATG 9 cut(s) 67, 379, 400, 1001, 1038, 1075, 1097, 1475, 1622
FriOI GRGCYC 2 cut(s) 1302, 1338
Fsp4HI GCNGC 7 cut(s) 150, 544, 599, 839, 1097, 1320, 1356
FspBI CTAG 4 cut(s) 974, 1002, 1427, 1475
GlaI GCGC 1 cut(s) 501
GluI GCNGC 7 cut(s) 150, 544, 599, 839, 1097, 1320, 1356
HaeIII GGCC 7 cut(s) 335, 431, 479, 1177, 1187, 1313, 1349
HapII CCGG 2 cut(s) 765, 1538
HhaI GCGC 1 cut(s) 502
Hin6I GCGC 1 cut(s) 500
HinP1I GCGC 1 cut(s) 500
HindIII AAGCTT 2 cut(s) 263, 1571
HpaII CCGG 2 cut(s) 765, 1538
HphI GGTGA 3 cut(s) 155, 364, 1721
Hpy166II GTNNAC 6 cut(s) 291, 883, 1024, 1255, 1514, 1666
Hpy188I TCNGA 7 cut(s) 245, 489, 577, 1084, 1406, 1675, 1720
Hpy8I GTNNAC 6 cut(s) 291, 883, 1024, 1255, 1514, 1666
Hpy99I CGWCG 1 cut(s) 464
HpyAV CCTTC 7 cut(s) 28, 343, 483, 506, 763, 1705, 1761
HpyCH4III ACNGT 4 cut(s) 937, 1252, 1390, 1787
HpyCH4IV ACGT 7 cut(s) 133, 251, 786, 872, 1026, 1269, 1510
HpyF10VI GCNNNNNNNGC 7 cut(s) 136, 204, 671, 1174, 1319, 1355, 1364
HpyF3I CTNAG 2 cut(s) 1323, 1672
HpySE526I ACGT 7 cut(s) 133, 251, 786, 872, 1026, 1269, 1510
HspAI GCGC 1 cut(s) 500
KpnI GGTACC 1 cut(s) 100
Ksp22I TGATCA 1 cut(s) 484
LmnI GCTCC 7 cut(s) 573, 712, 832, 1112, 1297, 1333, 1802
Lsp1109I GCAGC 6 cut(s) 136, 610, 825, 1108, 1331, 1367
LweI GCATC 4 cut(s) 45, 429, 1060, 1134
MaeI CTAG 4 cut(s) 974, 1002, 1427, 1475
MaeII ACGT 7 cut(s) 133, 251, 786, 872, 1026, 1269, 1510
MaeIII GTNAC 6 cut(s) 115, 352, 969, 984, 1434, 1781
MbiI CCGCTC 1 cut(s) 573
MboII GAAGA 9 cut(s) 187, 247, 304, 355, 358, 596, 710, 785, 1518
MfeI CAATTG 3 cut(s) 294, 1215, 1551
MflI RGATCY 3 cut(s) 309, 1123, 1206
MhlI GDGCHC 3 cut(s) 570, 1302, 1338
MlsI TGGCCA 1 cut(s) 1187
MluCI AATT 9 cut(s) 81, 294, 401, 587, 924, 1215, 1551, 1745, 1755
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 5 cut(s) 249, 349, 963, 977, 1551
MmeI TCCRAC 2 cut(s) 372, 1062
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 2 cut(s) 924, 1280
MscI TGGCCA 1 cut(s) 1187
MseI TTAA 7 cut(s) 405, 735, 843, 1112, 1130, 1629, 1758
MslI CAYNNNNRTG 4 cut(s) 437, 654, 1019, 1177
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 2 cut(s) 1322, 1358
MspCI CTTAAG 2 cut(s) 1111, 1129
MspI CCGG 2 cut(s) 765, 1538
MspR9I CCNGG 5 cut(s) 644, 766, 1460, 1538, 1562
MunI CAATTG 3 cut(s) 294, 1215, 1551
MvaI CCWGG 3 cut(s) 644, 1460, 1562
MvnI CGCG 1 cut(s) 502
MwoI GCNNNNNNNGC 7 cut(s) 136, 204, 671, 1174, 1319, 1355, 1364
NciI CCSGG 2 cut(s) 766, 1538
NcoI CCATGG 1 cut(s) 1172
NdeI CATATG 1 cut(s) 553
NheI GCTAGC 1 cut(s) 1001
NlaIV GGNNCC 6 cut(s) 98, 681, 1136, 1208, 1566, 1683
NmeAIII GCCGAG 1 cut(s) 1375
NmuCI GTSAC 5 cut(s) 115, 352, 969, 1434, 1781
NspI RCATGY 1 cut(s) 743
PaeR7I CTCGAG 1 cut(s) 1301
PagI TCATGA 1 cut(s) 1642
PciI ACATGT 1 cut(s) 739
PdmI GAANNNNTTC 2 cut(s) 924, 1280
PfeI GAWTC 5 cut(s) 418, 803, 1417, 1533, 1541
PfoI TCCNGGA 3 cut(s) 764, 1536, 1560
PkrI GCNGC 7 cut(s) 151, 545, 600, 840, 1098, 1321, 1357
PleI GAGTC 5 cut(s) 248, 349, 962, 976, 1551
PpsI GAGTC 5 cut(s) 248, 349, 962, 976, 1551
PscI ACATGT 1 cut(s) 739
Psp124BI GAGCTC 2 cut(s) 1302, 1338
Psp6I CCWGG 3 cut(s) 642, 1458, 1560
PspGI CCWGG 3 cut(s) 642, 1458, 1560
PspN4I GGNNCC 6 cut(s) 98, 681, 1136, 1208, 1566, 1683
PspPI GGNCC 1 cut(s) 1564
PsuI RGATCY 3 cut(s) 309, 1123, 1206
PvuII CAGCTG 2 cut(s) 1322, 1358
RsaI GTAC 4 cut(s) 98, 470, 506, 1515
RsaNI GTAC 4 cut(s) 97, 469, 505, 1514
RseI CAYNNNNRTG 4 cut(s) 437, 654, 1019, 1177
SacI GAGCTC 2 cut(s) 1302, 1338
SaqAI TTAA 7 cut(s) 405, 735, 843, 1112, 1130, 1629, 1758
SatI GCNGC 7 cut(s) 150, 544, 599, 839, 1097, 1320, 1356
Sau96I GGNCC 1 cut(s) 1564
SchI GAGTC 5 cut(s) 249, 349, 963, 977, 1551
ScrFI CCNGG 5 cut(s) 644, 766, 1460, 1538, 1562
SduI GDGCHC 3 cut(s) 570, 1302, 1338
SfaNI GCATC 4 cut(s) 45, 429, 1060, 1134
Sfr274I CTCGAG 1 cut(s) 1301
SinI GGWCC 1 cut(s) 1564
SlaI CTCGAG 1 cut(s) 1301
SmiMI CAYNNNNRTG 4 cut(s) 437, 654, 1019, 1177
SmlI CTYRAG 5 cut(s) 1111, 1129, 1301, 1337, 1574
SmoI CTYRAG 5 cut(s) 1111, 1129, 1301, 1337, 1574
SpeI ACTAGT 1 cut(s) 973
Sse9I AATT 9 cut(s) 81, 294, 401, 587, 924, 1215, 1551, 1745, 1755
SsiI CCGC 6 cut(s) 205, 502, 543, 571, 1147, 1661
SspMI CTAG 4 cut(s) 974, 1002, 1427, 1475
SstI GAGCTC 2 cut(s) 1302, 1338
StyD4I CCNGG 5 cut(s) 642, 764, 1458, 1536, 1560
StyI CCWWGG 4 cut(s) 675, 1172, 1314, 1426
TaaI ACNGT 4 cut(s) 937, 1252, 1390, 1787
TaiI ACGT 7 cut(s) 136, 254, 789, 875, 1029, 1272, 1513
TaqI TCGA 9 cut(s) 68, 437, 449, 525, 633, 778, 1302, 1702, 1798
TasI AATT 9 cut(s) 81, 294, 401, 587, 924, 1215, 1551, 1745, 1755
TatI WGTACW 1 cut(s) 1513
TauI GCSGC 1 cut(s) 546
TfiI GAWTC 5 cut(s) 418, 803, 1417, 1533, 1541
Tru1I TTAA 7 cut(s) 405, 735, 843, 1112, 1130, 1629, 1758
Tru9I TTAA 7 cut(s) 405, 735, 843, 1112, 1130, 1629, 1758
TscAI CASTG 4 cut(s) 109, 192, 343, 1587
TseFI GTSAC 5 cut(s) 115, 352, 969, 1434, 1781
TseI GCWGC 6 cut(s) 149, 598, 838, 1096, 1319, 1355
Tsp45I GTSAC 5 cut(s) 115, 352, 969, 1434, 1781
TspDTI ATGAA 8 cut(s) 104, 310, 431, 638, 933, 950, 1659, 1779
TspGWI ACGGA 3 cut(s) 477, 1310, 1649
TspRI CASTG 4 cut(s) 109, 192, 343, 1587
Vha464I CTTAAG 2 cut(s) 1111, 1129
VpaK11BI GGWCC 1 cut(s) 1564
XapI RAATTY 3 cut(s) 587, 924, 1745
XceI RCATGY 1 cut(s) 743
XcmI CCANNNNNNNNNTGG 1 cut(s) 1176
XhoI CTCGAG 1 cut(s) 1301
XmaJI CCTAGG 1 cut(s) 1426
XmiI GTMKAC 2 cut(s) 882, 1665
XmnI GAANNNNTTC 2 cut(s) 924, 1280
XspI CTAG 4 cut(s) 974, 1002, 1427, 1475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.