pycom16g12550

peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
8846552 .. 8847708
1157 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1068 bp
ATGATCGGATTTTCGGGGTTTGGCTCGGTGGCGTTGAGCTTCTCAGGAGCTACACGGCTTAGTCAACGCAGAATGGGATTGTTTGGAGTGTCAAGAAGGACGTCACAAGATAAAACATGCACAGGGATTTACCATGTGAATATTAGCATCCATTTTTACCCTGCTGAGAAAAATTTGAATTATAACTATGAGCAAAATTTGGGAAATTTGGATTCTGGGTACCATTATTGGGCGGATTCGATCTTGCCCATTTCGAGAAATCTGCCTTTGAATGATGGGTTGTGGCTTGAAATCCATTATTCGACCGATACACAGTTGAAGGAATTTAAGATTCCACAGAATGCTTATAGGGCTGTGTTGGAGGTATATGTTTCATTTCATGAGAATGATGAGTTTTGGTATTCAAATGCTCCGAATGAGTACATTGCTGTAAACAATCTTAGAGGTACACCTGGAAACGGGCCTTTTAGGGAGGTTGTGGTGAGTTTAGATGGTAAGGTTGTTGGTGCAATCTGGCCTTTTACTGTGATTTTCACTGGAGGGTTCAATCCCCTCCTGTGGAGTCCAATTACTGTGATTGGCTCGTACAATCTCCCTTCTTATGATATTGAAATCACGTCCTTTTTAGGAAAGATATTGGATGGGAAGAGCCACAAGTTTGGTTTTAGTGTCACAAATGTGTTGAATATTTGGTGTGTTGACGTGAATTTGCATCTTTGGTTGGACAAGCGGAGCACAAAAACTGAAGGAGGGCTTTTGGAGCATAGTAGCTTGCCCCTTGTTGTTTCATTGGTTTTGGATTTCAAGGGTTTAAATGGCACATTTTTGACAAGGGTCGGCAGGTCTGTGTCATCGACTGGATGGGTGAAGTCCTCCTATGGGAATATCACAACTGATGCAACTCAAGACCTCCATTATGGTAATACAATGGTCATCAAGAATGATGGCAATACGCAGATAGTGAATCAGACAATCCATTTCAACGATACAGTTCATATCAGGCCGCCATCCTCCATTATCCACTCAATGTCATCAAACAAAAAATTTCCTCTTTACTTTACATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

356

Amino Acids

39.81

Weight (kDa)

7.21

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 37 - 254 3.2e-54 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 274 - 351 1.7e-22 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022367)

Species Orthologous Gene IDs
malus_domestica MD08G1248900.v1.1 MD16G1147200.v1.1
pyrus_communis pycom16g12540 pycom16g12550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 183, 1066
AatII GACGTC 1 cut(s) 104
Acc36I ACCTGC 1 cut(s) 831
Acc65I GGTACC 1 cut(s) 219
AccB1I GGYRCC 1 cut(s) 219
AciI CCGC 3 cut(s) 233, 730, 1004
AcsI RAATTY 6 cut(s) 172, 196, 205, 323, 706, 1043
AcuI CTGAAG 1 cut(s) 765
AcyI GRCGYC 1 cut(s) 101
AfaI GTAC 4 cut(s) 221, 422, 448, 587
AfiI CCNNNNNNNGG 4 cut(s) 229, 458, 558, 879
AjiI CACGTC 2 cut(s) 618, 703
AjnI CCWGG 1 cut(s) 451
AleI CACNNNNGTG 1 cut(s) 677
AluBI AGCT 3 cut(s) 39, 50, 771
AluI AGCT 3 cut(s) 39, 50, 771
Alw21I GWGCWC 1 cut(s) 737
AoxI GGCC 3 cut(s) 461, 515, 1001
ApoI RAATTY 6 cut(s) 172, 196, 205, 323, 706, 1043
Asp718I GGTACC 1 cut(s) 219
AspS9I GGNCC 1 cut(s) 461
AsuHPI GGTGA 2 cut(s) 493, 877
BanI GGYRCC 1 cut(s) 219
Bbv12I GWGCWC 1 cut(s) 737
BccI CCATC 6 cut(s) 269, 485, 635, 855, 938, 1015
BceAI ACGGC 1 cut(s) 71
BcgI CGANNNNNNTGC 2 cut(s) 244, 278
BciT130I CCWGG 1 cut(s) 453
BfuAI ACCTGC 1 cut(s) 831
BisI GCNGC 1 cut(s) 1004
BlsI GCNGC 1 cut(s) 1005
Bme1390I CCNGG 1 cut(s) 453
BmgBI CACGTC 2 cut(s) 618, 703
BmgT120I GGNCC 1 cut(s) 461
BmiI GGNNCC 1 cut(s) 221
BmrFI CCNGG 1 cut(s) 453
BmsI GCATC 3 cut(s) 156, 721, 886
BoxI GACNNNNGTC 1 cut(s) 833
BpmI CTGGAG 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 888
BsaHI GRCGYC 1 cut(s) 101
Bsc4I CCNNNNNNNGG 4 cut(s) 229, 458, 558, 879
Bse1I ACTGG 2 cut(s) 541, 862
Bse3DI GCAATG 1 cut(s) 423
BseBI CCWGG 1 cut(s) 453
BseGI GGATG 4 cut(s) 147, 646, 866, 1007
BseLI CCNNNNNNNGG 4 cut(s) 229, 458, 558, 879
BseMI GCAATG 1 cut(s) 423
BseMII CTCAG 2 cut(s) 57, 156
BseNI ACTGG 2 cut(s) 541, 862
Bsh1285I CGRYCG 1 cut(s) 306
BshFI GGCC 3 cut(s) 463, 517, 1003
BshNI GGYRCC 1 cut(s) 219
BsiEI CGRYCG 1 cut(s) 306
BsiHKAI GWGCWC 1 cut(s) 737
BslI CCNNNNNNNGG 4 cut(s) 229, 458, 558, 879
BsmI GAATGC 1 cut(s) 346
BsnI GGCC 3 cut(s) 463, 517, 1003
Bsp1286I GDGCHC 1 cut(s) 737
Bsp143I GATC 2 cut(s) 3, 240
BspACI CCGC 3 cut(s) 233, 730, 1004
BspANI GGCC 3 cut(s) 463, 517, 1003
BspCNI CTCAG 2 cut(s) 56, 157
BspHI TCATGA 1 cut(s) 379
BspLI GGNNCC 1 cut(s) 221
BspMI ACCTGC 1 cut(s) 831
BspQI GCTCTTC 1 cut(s) 641
BspT107I GGYRCC 1 cut(s) 219
BsrDI GCAATG 1 cut(s) 423
BsrI ACTGG 2 cut(s) 541, 862
BssMI GATC 2 cut(s) 3, 240
BssNI GRCGYC 1 cut(s) 101
Bst2UI CCWGG 1 cut(s) 453
Bst4CI ACNGT 4 cut(s) 315, 526, 574, 991
Bst6I CTCTTC 1 cut(s) 641
BstACI GRCGYC 1 cut(s) 101
BstC8I GCNNGC 1 cut(s) 773
BstDEI CTNAG 4 cut(s) 43, 59, 165, 440
BstF5I GGATG 4 cut(s) 147, 646, 866, 1007
BstKTI GATC 2 cut(s) 6, 243
BstMBI GATC 2 cut(s) 3, 240
BstMCI CGRYCG 1 cut(s) 306
BstMWI GCNNNNNNNGC 2 cut(s) 350, 760
BstNI CCWGG 1 cut(s) 453
BstNSI RCATGY 1 cut(s) 120
BstPAI GACNNNNGTC 1 cut(s) 833
BstSCI CCNGG 1 cut(s) 451
BstXI CCANNNNNNTGG 1 cut(s) 659
BsuRI GGCC 3 cut(s) 463, 517, 1003
BtrI CACGTC 2 cut(s) 618, 703
BtsCI GGATG 4 cut(s) 147, 646, 866, 1007
BtsIMutI CAGTG 1 cut(s) 534
BveI ACCTGC 1 cut(s) 831
Cac8I GCNNGC 1 cut(s) 773
CciI TCATGA 1 cut(s) 379
Cfr13I GGNCC 1 cut(s) 461
Csp6I GTAC 4 cut(s) 220, 421, 447, 586
CviAII CATG 3 cut(s) 117, 134, 380
CviQI GTAC 4 cut(s) 220, 421, 447, 586
DdeI CTNAG 4 cut(s) 43, 59, 165, 440
DpnI GATC 2 cut(s) 5, 242
DpnII GATC 2 cut(s) 3, 240
DraI TTTAAA 1 cut(s) 813
Eam1104I CTCTTC 1 cut(s) 641
EarI CTCTTC 1 cut(s) 641
EciI GGCGGA 1 cut(s) 248
Eco57I CTGAAG 1 cut(s) 765
EcoRII CCWGG 1 cut(s) 451
FaeI CATG 3 cut(s) 120, 137, 383
FalI AAGNNNNNCTT 2 cut(s) 738, 770
FatI CATG 3 cut(s) 116, 133, 379
Fnu4HI GCNGC 1 cut(s) 1004
FokI GGATG 4 cut(s) 134, 653, 873, 994
Fsp4HI GCNGC 1 cut(s) 1004
GluI GCNGC 1 cut(s) 1004
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 3 cut(s) 463, 517, 1003
Hin1I GRCGYC 1 cut(s) 101
Hin1II CATG 3 cut(s) 120, 137, 383
HincII GTYRAC 2 cut(s) 65, 700
HindII GTYRAC 2 cut(s) 65, 700
HinfI GANTC 5 cut(s) 212, 236, 331, 562, 964
HphI GGTGA 2 cut(s) 493, 877
Hpy166II GTNNAC 4 cut(s) 65, 433, 449, 700
Hpy188I TCNGA 3 cut(s) 8, 414, 969
Hpy188III TCNNGA 6 cut(s) 45, 93, 255, 380, 905, 937
Hpy8I GTNNAC 4 cut(s) 65, 433, 449, 700
HpyAV CCTTC 4 cut(s) 90, 313, 606, 740
HpyCH4III ACNGT 4 cut(s) 315, 526, 574, 991
HpyCH4IV ACGT 3 cut(s) 101, 617, 702
HpyCH4V TGCA 4 cut(s) 120, 509, 712, 899
HpyF10VI GCNNNNNNNGC 2 cut(s) 350, 760
HpyF3I CTNAG 4 cut(s) 43, 59, 165, 440
HpySE526I ACGT 3 cut(s) 101, 617, 702
Hsp92I GRCGYC 1 cut(s) 101
Hsp92II CATG 3 cut(s) 120, 137, 383
KpnI GGTACC 1 cut(s) 223
Kzo9I GATC 2 cut(s) 3, 240
LguI GCTCTTC 1 cut(s) 641
LmnI GCTCC 4 cut(s) 47, 415, 732, 760
LweI GCATC 3 cut(s) 156, 721, 886
MaeII ACGT 3 cut(s) 101, 617, 702
MaeIII GTNAC 2 cut(s) 102, 670
MalI GATC 2 cut(s) 5, 242
MboI GATC 2 cut(s) 3, 240
MboII GAAGA 1 cut(s) 658
MhlI GDGCHC 1 cut(s) 737
MluCI AATT 8 cut(s) 172, 178, 196, 205, 323, 567, 706, 1043
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 2 cut(s) 339, 702
MseI TTAA 2 cut(s) 327, 812
MslI CAYNNNNRTG 2 cut(s) 384, 677
MspR9I CCNGG 1 cut(s) 453
Mva1269I GAATGC 1 cut(s) 346
MvaI CCWGG 1 cut(s) 453
MwoI GCNNNNNNNGC 2 cut(s) 350, 760
NdeII GATC 2 cut(s) 3, 240
NlaIII CATG 3 cut(s) 120, 137, 383
NlaIV GGNNCC 1 cut(s) 221
NmuCI GTSAC 2 cut(s) 102, 670
NspI RCATGY 1 cut(s) 120
OliI CACNNNNGTG 1 cut(s) 677
PagI TCATGA 1 cut(s) 379
PciSI GCTCTTC 1 cut(s) 641
PctI GAATGC 1 cut(s) 346
PfeI GAWTC 4 cut(s) 212, 236, 331, 964
PkrI GCNGC 1 cut(s) 1005
PleI GAGTC 1 cut(s) 570
PpsI GAGTC 1 cut(s) 570
PshAI GACNNNNGTC 1 cut(s) 833
PsiI TTATAA 2 cut(s) 183, 1066
Psp6I CCWGG 1 cut(s) 451
PspGI CCWGG 1 cut(s) 451
PspN4I GGNNCC 1 cut(s) 221
PspPI GGNCC 1 cut(s) 461
RsaI GTAC 4 cut(s) 221, 422, 448, 587
RsaNI GTAC 4 cut(s) 220, 421, 447, 586
RseI CAYNNNNRTG 2 cut(s) 384, 677
SapI GCTCTTC 1 cut(s) 641
SaqAI TTAA 2 cut(s) 327, 812
SatI GCNGC 1 cut(s) 1004
Sau3AI GATC 2 cut(s) 3, 240
Sau96I GGNCC 1 cut(s) 461
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 1 cut(s) 453
SduI GDGCHC 1 cut(s) 737
SfaNI GCATC 3 cut(s) 156, 721, 886
SmiMI CAYNNNNRTG 2 cut(s) 384, 677
SmlI CTYRAG 1 cut(s) 903
SmoI CTYRAG 1 cut(s) 903
Sse9I AATT 8 cut(s) 172, 178, 196, 205, 323, 567, 706, 1043
SsiI CCGC 3 cut(s) 233, 730, 1004
SspI AATATT 2 cut(s) 142, 688
StyD4I CCNGG 1 cut(s) 451
TaaI ACNGT 4 cut(s) 315, 526, 574, 991
TaiI ACGT 3 cut(s) 104, 620, 705
TaqI TCGA 4 cut(s) 239, 254, 302, 854
TaqII GACCGA 1 cut(s) 320
TasI AATT 8 cut(s) 172, 178, 196, 205, 323, 567, 706, 1043
TatI WGTACW 1 cut(s) 420
TauI GCSGC 1 cut(s) 1006
TfiI GAWTC 4 cut(s) 212, 236, 331, 964
Tru1I TTAA 2 cut(s) 327, 812
Tru9I TTAA 2 cut(s) 327, 812
TscAI CASTG 1 cut(s) 541
TseFI GTSAC 2 cut(s) 102, 670
Tsp45I GTSAC 2 cut(s) 102, 670
TspDTI ATGAA 4 cut(s) 363, 368, 777, 983
TspRI CASTG 1 cut(s) 541
XapI RAATTY 6 cut(s) 172, 196, 205, 323, 706, 1043
XceI RCATGY 1 cut(s) 120
ZraI GACGTC 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.