pycom16g15760
NAC Family

Transcription regulatory protein SNF2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0022554
Physical Location & Seq
Forward (+)
11698760 .. 11703146
4387 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1383 bp
ATGGCCGAGCTGGACAGCAGCAGCGCCAGCCTCGACCACGTCCACAAGACCAAGTCCCTGATCTGCGCCCTCAACCTCCTCTCCCGCAACCTCCCCCTCCCTCCCGACCTATTCGACGTCGTTTCTTCCATCTATGAATGCGCCCCGGATGCCCTTCTCGACGGTGACGAGGGTTTGGATGGCCCTCATAGTTCTGCTTCAGAAGAGGACTTGTTAGCAGACCTTGGAGATGCACTGTTGGAACAACGTCAAAATTTCACCTCGGGTGCTTCATTAATAGAATCGAAACGAAAACGTTATGAAAGCTACATTCAGCATCGGTTAACCGAACTTGAAGAATTACCTTCAAGTAGAGGAGAGGACCTGCAGACAAAGTGCTTGCTCGAACTCTATGGGCTAAAGCTTGCAGAATTGCAAAAGAAGGTTCGCTCTGAAGTGAGTTCAGAATACTCACTCCGTATGCATTGTGAGCATCCTGACAAAACATTGTTTGACTGGGGCATGATGCGATTGCGTCGTCCACTCTATGGTGTTGGAGATGCTTTTGCCATGGAGGCTGATGATCAGTTCAGGAAGAAACGAGATGCTGAGCGCCTCTCAAGGTTAGAAGAGGAGGAGAAGAACAATATCGAGACTAGGAAAAGAAAATTCTTTACAGAAATACTTAATGCTGTTCGTGAATACCAATTGCAAATTCAGGCTTCTATGAAACGTCGGAAACAGAGGATCGATCATGTCCTGAGTTGGCATGGAAAGCAAAGACAACGGGCCACACGGGCTGAGAAATTGAGGTTCCAAGCCTTAAAGGCTGATGATCAGGAAGCATACATGAGAATGGTTAAGGAGAGCAAGAATGAAAGGCTGACAATGCTTCTTGAAGAAACAAATAAACTCCTCGTTAATTTGGGAGCTGCTGTTCAACGGCAGAAAGATTCTAAACATTTAGAGGGTACTGAAGAAATGAAAGACTCTGAAGGTGATTTGACTGAGTTGGAAGAAGATGTGGAGCTCATTGATTCTGATTGTAATGATGACAGTAGTGACTTGCTTAAAGGTCAGCGGCAATATAACTCAGCCATCCATTCTATTCAGGAACAGGTGACTGAGCAACCCTCCATGCTTCAAGGTGGAGAATTAAGGCCTTACCAGGTTGAGGGCCTACAATGGATGGTTTCCTTGTTCAATAACAATTTAAATGGTATTTTGGCTGACGAGATGGGTTTGGGTAAAACCATACAAACTATATCATTGATTGCATATCTCATTGAAAACAAGGGTGTTACTGGACCCCACTTGATAGTGGCACCGAAGGCCGTACTACCAAATTGGGTTAATGAATTTGCAGCATGGGCTCCTAGGTATTATTGCTGCCGTTCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000182 GO:0000228 GO:0000785 GO:0000790 GO:0000902 GO:0001085 GO:0001101 GO:0001102 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005975 GO:0005984 GO:0005985 GO:0005987 GO:0006066 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006302 GO:0006310 GO:0006325 GO:0006338 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006974 GO:0006996 GO:0007154 GO:0007275 GO:0008094 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009311 GO:0009313 GO:0009408 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009651 GO:0009653 GO:0009791 GO:0009826 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010015 GO:0010035 GO:0010073 GO:0010074 GO:0010078 GO:0010154 GO:0010162 GO:0010231 GO:0010431 GO:0010453 GO:0010455 GO:0010468 GO:0010492 GO:0010556 GO:0010557 GO:0010570 GO:0010604 GO:0010628 GO:0010810 GO:0010811 GO:0016043 GO:0016049 GO:0016052 GO:0016462 GO:0016514 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0021700 GO:0022414 GO:0022611 GO:0022622 GO:0030155 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031491 GO:0031492 GO:0031494 GO:0031496 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0032989 GO:0032991 GO:0033554 GO:0033613 GO:0034198 GO:0034641 GO:0034645 GO:0034728 GO:0036003 GO:0040007 GO:0040008 GO:0042148 GO:0042221 GO:0042393 GO:0042594 GO:0042623 GO:0042766 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0043618 GO:0043620 GO:0043900 GO:0043902 GO:0043933 GO:0044107 GO:0044109 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044262 GO:0044275 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045595 GO:0045597 GO:0045785 GO:0045893 GO:0045927 GO:0045935 GO:0045944 GO:0046164 GO:0046352 GO:0046483 GO:0048316 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048589 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0060255 GO:0060560 GO:0061412 GO:0061458 GO:0065007 GO:0070013 GO:0070577 GO:0070603 GO:0070784 GO:0070786 GO:0071496 GO:0071695 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090033 GO:0090304 GO:0097159 GO:0097437 GO:0098727 GO:0099402 GO:0140030 GO:0140033 GO:1900187 GO:1900189 GO:1900190 GO:1900192 GO:1900428 GO:1900430 GO:1901360 GO:1901363 GO:1901575 GO:1901576 GO:1901615 GO:1901616 GO:1901700 GO:1902494 GO:1902680 GO:1903506 GO:1903508 GO:1904949 GO:1905392 GO:1990837 GO:1990928 GO:2000112 GO:2000217 GO:2000219 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Helicase_C SNF2_N SnAC

Protein Analysis

461

Amino Acids

52.65

Weight (kDa)

5.28

Isoelectric Point (pI)

54.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 382 - 451 4.7e-27 SNF2-related domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0022554)

Species Orthologous Gene IDs
pyrus_communis pycom11g18960 pycom13g16180 pycom16g15760
rosa_multiflora Rmu_ssc0000340.1_g000008

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 120
Acc36I ACCTGC 1 cut(s) 372
AccB1I GGYRCC 1 cut(s) 1303
AccB7I CCANNNNNTGG 1 cut(s) 527
AciI CCGC 2 cut(s) 85, 1060
AclI AACGTT 1 cut(s) 295
AclWI GGATC 1 cut(s) 734
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 253, 647, 693, 1337
AcuI CTGAAG 4 cut(s) 183, 453, 975, 993
AcyI GRCGYC 1 cut(s) 117
AfaI GTAC 2 cut(s) 952, 1317
AfiI CCNNNNNNNGG 2 cut(s) 527, 1153
AgsI TTSAA 7 cut(s) 335, 348, 878, 920, 1124, 1183, 1268
AjiI CACGTC 1 cut(s) 40
AjnI CCWGG 1 cut(s) 1146
AjuI GAANNNNNNNTTGG 2 cut(s) 678, 710
AloI GAACNNNNNNTCC 2 cut(s) 900, 932
AluBI AGCT 5 cut(s) 10, 306, 403, 911, 1009
AluI AGCT 5 cut(s) 10, 306, 403, 911, 1009
Alw21I GWGCWC 1 cut(s) 1011
Alw26I GTCTC 1 cut(s) 626
AlwI GGATC 1 cut(s) 734
Ama87I CYCGRG 1 cut(s) 262
AoxI GGCC 6 cut(s) 3, 181, 768, 1139, 1156, 1311
ApeKI GCWGC 5 cut(s) 18, 21, 911, 1343, 1368
ApoI RAATTY 4 cut(s) 253, 647, 693, 1337
AseI ATTAAT 1 cut(s) 275
AspA2I CCTAGG 1 cut(s) 1355
AspLEI GCGC 4 cut(s) 26, 68, 143, 594
AspS9I GGNCC 5 cut(s) 182, 361, 768, 1156, 1286
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 4 cut(s) 176, 250, 989, 1111
AvaI CYCGRG 1 cut(s) 262
AvaII GGWCC 2 cut(s) 361, 1286
AvrII CCTAGG 1 cut(s) 1355
BanI GGYRCC 1 cut(s) 1303
BanII GRGCYC 2 cut(s) 1011, 1354
Bbv12I GWGCWC 1 cut(s) 1011
BbvI GCAGC 5 cut(s) 30, 33, 898, 1355, 1355
BccI CCATC 5 cut(s) 137, 173, 1085, 1162, 1210
BceAI ACGGC 3 cut(s) 938, 1298, 1356
BciT130I CCWGG 1 cut(s) 1148
BclI TGATCA 2 cut(s) 562, 814
BcnI CCSGG 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 626
BfaI CTAG 2 cut(s) 636, 1356
BfmI CTRYAG 1 cut(s) 365
BfoI RGCGCY 2 cut(s) 27, 595
BfuAI ACCTGC 1 cut(s) 372
BglI GCCNNNNNGGC 3 cut(s) 554, 776, 806
BisI GCNGC 6 cut(s) 19, 22, 912, 1061, 1344, 1369
BlnI CCTAGG 1 cut(s) 1355
BlpI GCTNAGC 1 cut(s) 588
BlsI GCNGC 6 cut(s) 20, 23, 913, 1062, 1345, 1370
Bme1390I CCNGG 2 cut(s) 146, 1148
Bme18I GGWCC 2 cut(s) 361, 1286
BmeT110I CYCGRG 1 cut(s) 262
BmgBI CACGTC 1 cut(s) 40
BmgT120I GGNCC 5 cut(s) 182, 361, 768, 1156, 1286
BmiI GGNNCC 4 cut(s) 794, 1288, 1305, 1353
BmrFI CCNGG 2 cut(s) 146, 1148
BmrI ACTGGG 1 cut(s) 505
BmsI GCATC 7 cut(s) 139, 220, 325, 481, 495, 529, 574
BmuI ACTGGG 1 cut(s) 505
BplI GAGNNNNNCTC 4 cut(s) 581, 613, 1097, 1129
Bpu1102I GCTNAGC 1 cut(s) 588
BpuEI CTTGAG 1 cut(s) 583
BpuMI CCSGG 1 cut(s) 146
Bsa29I ATCGAT 1 cut(s) 729
BsaHI GRCGYC 1 cut(s) 117
BsaJI CCNNGG 5 cut(s) 144, 223, 261, 549, 1355
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 900, 930
Bsc4I CCNNNNNNNGG 2 cut(s) 527, 1153
Bse1I ACTGG 2 cut(s) 500, 1288
BseBI CCWGG 1 cut(s) 1148
BseCI ATCGAT 1 cut(s) 729
BseDI CCNNGG 5 cut(s) 144, 223, 261, 549, 1355
BseGI GGATG 5 cut(s) 154, 184, 472, 1077, 1173
BseLI CCNNNNNNNGG 2 cut(s) 527, 1153
BseMII CTCAG 6 cut(s) 579, 731, 771, 978, 1086, 1095
BseNI ACTGG 2 cut(s) 500, 1288
BseRI GAGGAG 5 cut(s) 68, 369, 626, 629, 884
BseXI GCAGC 5 cut(s) 30, 33, 898, 1355, 1355
BshFI GGCC 6 cut(s) 5, 183, 770, 1141, 1158, 1313
BshNI GGYRCC 1 cut(s) 1303
BshVI ATCGAT 1 cut(s) 729
BsiHKAI GWGCWC 1 cut(s) 1011
BsiHKCI CYCGRG 1 cut(s) 262
BsiSI CCGG 1 cut(s) 146
BslFI GGGAC 1 cut(s) 40
BslI CCNNNNNNNGG 2 cut(s) 527, 1153
BsmAI GTCTC 1 cut(s) 626
BsmFI GGGAC 1 cut(s) 40
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 6 cut(s) 5, 183, 770, 1141, 1158, 1313
BsoBI CYCGRG 1 cut(s) 262
Bsp1286I GDGCHC 2 cut(s) 1011, 1354
Bsp143I GATC 5 cut(s) 60, 562, 726, 730, 814
Bsp1720I GCTNAGC 1 cut(s) 588
Bsp19I CCATGG 1 cut(s) 549
BspACI CCGC 2 cut(s) 85, 1060
BspANI GGCC 6 cut(s) 5, 183, 770, 1141, 1158, 1313
BspCNI CTCAG 6 cut(s) 580, 732, 772, 979, 1085, 1096
BspDI ATCGAT 1 cut(s) 729
BspLI GGNNCC 4 cut(s) 794, 1288, 1305, 1353
BspMAI CTGCAG 1 cut(s) 369
BspMI ACCTGC 1 cut(s) 372
BspPI GGATC 1 cut(s) 734
BspT107I GGYRCC 1 cut(s) 1303
BsrI ACTGG 2 cut(s) 500, 1288
BssECI CCNNGG 5 cut(s) 144, 223, 261, 549, 1355
BssMI GATC 5 cut(s) 60, 562, 726, 730, 814
BssNI GRCGYC 1 cut(s) 117
BssT1I CCWWGG 3 cut(s) 223, 549, 1355
Bst2UI CCWGG 1 cut(s) 1148
Bst4CI ACNGT 3 cut(s) 164, 237, 1037
Bst6I CTCTTC 2 cut(s) 198, 603
BstACI GRCGYC 1 cut(s) 117
BstC8I GCNNGC 3 cut(s) 28, 380, 405
BstDEI CTNAG 6 cut(s) 588, 740, 780, 987, 1072, 1104
BstDSI CCRYGG 1 cut(s) 549
BstF5I GGATG 5 cut(s) 154, 184, 472, 1077, 1173
BstH2I RGCGCY 2 cut(s) 27, 595
BstHHI GCGC 4 cut(s) 26, 68, 143, 594
BstKTI GATC 5 cut(s) 63, 565, 729, 733, 817
BstMAI GTCTC 1 cut(s) 626
BstMBI GATC 5 cut(s) 60, 562, 726, 730, 814
BstNI CCWGG 1 cut(s) 1148
BstSCI CCNGG 2 cut(s) 144, 1146
BstSFI CTRYAG 1 cut(s) 365
BstV1I GCAGC 5 cut(s) 30, 33, 898, 1355, 1355
Bsu15I ATCGAT 1 cut(s) 729
BsuRI GGCC 6 cut(s) 5, 183, 770, 1141, 1158, 1313
BsuTUI ATCGAT 1 cut(s) 729
BtgI CCRYGG 1 cut(s) 549
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 5 cut(s) 154, 184, 472, 1077, 1173
BtsIMutI CAGTG 1 cut(s) 233
BveI ACCTGC 1 cut(s) 372
Cac8I GCNNGC 3 cut(s) 28, 380, 405
CfoI GCGC 4 cut(s) 26, 68, 143, 594
Cfr13I GGNCC 5 cut(s) 182, 361, 768, 1156, 1286
ClaI ATCGAT 1 cut(s) 729
CseI GACGC 1 cut(s) 503
CsiI ACCWGGT 1 cut(s) 1146
Csp6I GTAC 2 cut(s) 951, 1316
CviAII CATG 7 cut(s) 502, 550, 734, 749, 829, 1117, 1347
CviQI GTAC 2 cut(s) 951, 1316
DdeI CTNAG 6 cut(s) 588, 740, 780, 987, 1072, 1104
DpnI GATC 5 cut(s) 62, 564, 728, 732, 816
DpnII GATC 5 cut(s) 60, 562, 726, 730, 814
DraI TTTAAA 1 cut(s) 1194
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 198, 603
EarI CTCTTC 2 cut(s) 198, 603
Ecl136II GAGCTC 1 cut(s) 1009
Eco130I CCWWGG 3 cut(s) 223, 549, 1355
Eco147I AGGCCT 1 cut(s) 1141
Eco24I GRGCYC 2 cut(s) 1011, 1354
Eco47I GGWCC 2 cut(s) 361, 1286
Eco53kI GAGCTC 1 cut(s) 1009
Eco57I CTGAAG 4 cut(s) 183, 453, 975, 993
Eco88I CYCGRG 1 cut(s) 262
EcoICRI GAGCTC 1 cut(s) 1009
EcoO109I RGGNCCY 2 cut(s) 361, 1156
EcoRII CCWGG 1 cut(s) 1146
EcoT14I CCWWGG 3 cut(s) 223, 549, 1355
EcoT22I ATGCAT 1 cut(s) 465
EcoT38I GRGCYC 2 cut(s) 1011, 1354
ErhI CCWWGG 3 cut(s) 223, 549, 1355
FaeI CATG 7 cut(s) 505, 553, 737, 752, 832, 1120, 1350
FaqI GGGAC 1 cut(s) 40
FatI CATG 7 cut(s) 501, 549, 733, 748, 828, 1116, 1346
FauI CCCGC 1 cut(s) 92
FbaI TGATCA 2 cut(s) 562, 814
Fnu4HI GCNGC 6 cut(s) 19, 22, 912, 1061, 1344, 1369
FokI GGATG 5 cut(s) 161, 191, 459, 1064, 1180
FriOI GRGCYC 2 cut(s) 1011, 1354
Fsp4HI GCNGC 6 cut(s) 19, 22, 912, 1061, 1344, 1369
FspBI CTAG 2 cut(s) 636, 1356
GlaI GCGC 4 cut(s) 25, 67, 142, 593
GluI GCNGC 6 cut(s) 19, 22, 912, 1061, 1344, 1369
HaeII RGCGCY 2 cut(s) 27, 595
HaeIII GGCC 6 cut(s) 5, 183, 770, 1141, 1158, 1313
HapII CCGG 1 cut(s) 146
HgaI GACGC 1 cut(s) 503
HhaI GCGC 4 cut(s) 26, 68, 143, 594
Hin1I GRCGYC 1 cut(s) 117
Hin1II CATG 7 cut(s) 505, 553, 737, 752, 832, 1120, 1350
Hin6I GCGC 4 cut(s) 24, 66, 141, 592
HinP1I GCGC 4 cut(s) 24, 66, 141, 592
HincII GTYRAC 1 cut(s) 324
HindII GTYRAC 1 cut(s) 324
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 4 cut(s) 281, 932, 968, 1016
HpaI GTTAAC 1 cut(s) 324
HpaII CCGG 1 cut(s) 146
HphI GGTGA 4 cut(s) 176, 250, 989, 1111
Hpy166II GTNNAC 3 cut(s) 43, 324, 521
Hpy188I TCNGA 6 cut(s) 202, 433, 445, 717, 973, 1021
Hpy8I GTNNAC 3 cut(s) 43, 324, 521
Hpy99I CGWCG 5 cut(s) 119, 122, 164, 519, 717
HpyAV CCTTC 5 cut(s) 164, 354, 415, 968, 1303
HpyCH4III ACNGT 3 cut(s) 164, 237, 1037
HpyCH4IV ACGT 5 cut(s) 39, 117, 247, 295, 712
HpyCH4V TGCA 8 cut(s) 233, 367, 407, 415, 463, 691, 1256, 1343
HpyF3I CTNAG 6 cut(s) 588, 740, 780, 987, 1072, 1104
HpySE526I ACGT 5 cut(s) 39, 117, 247, 295, 712
Hsp92I GRCGYC 1 cut(s) 117
Hsp92II CATG 7 cut(s) 505, 553, 737, 752, 832, 1120, 1350
HspAI GCGC 4 cut(s) 24, 66, 141, 592
Ksp22I TGATCA 2 cut(s) 562, 814
KspAI GTTAAC 1 cut(s) 324
Kzo9I GATC 5 cut(s) 60, 562, 726, 730, 814
LmnI GCTCC 3 cut(s) 908, 1006, 1357
Lsp1109I GCAGC 5 cut(s) 30, 33, 898, 1355, 1355
LweI GCATC 7 cut(s) 139, 220, 325, 481, 495, 529, 574
MabI ACCWGGT 1 cut(s) 1146
MaeI CTAG 2 cut(s) 636, 1356
MaeII ACGT 5 cut(s) 39, 117, 247, 295, 712
MaeIII GTNAC 4 cut(s) 164, 1040, 1099, 1279
MalI GATC 5 cut(s) 62, 564, 728, 732, 816
MboI GATC 5 cut(s) 60, 562, 726, 730, 814
MfeI CAATTG 1 cut(s) 686
MhlI GDGCHC 2 cut(s) 1011, 1354
MlyI GAGTC 1 cut(s) 962
MmeI TCCRAC 4 cut(s) 219, 514, 695, 972
Mph1103I ATGCAT 1 cut(s) 465
MslI CAYNNNNRTG 1 cut(s) 833
MspA1I CMGCKG 1 cut(s) 1060
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 2 cut(s) 146, 1148
MunI CAATTG 1 cut(s) 686
Mva1269I GAATGC 1 cut(s) 143
MvaI CCWGG 1 cut(s) 1148
NciI CCSGG 1 cut(s) 146
NcoI CCATGG 1 cut(s) 549
NdeII GATC 5 cut(s) 60, 562, 726, 730, 814
NlaIII CATG 7 cut(s) 505, 553, 737, 752, 832, 1120, 1350
NlaIV GGNNCC 4 cut(s) 794, 1288, 1305, 1353
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 3 cut(s) 164, 1040, 1099
NsiI ATGCAT 1 cut(s) 465
PceI AGGCCT 1 cut(s) 1141
PcsI WCGNNNNNNNCGW 1 cut(s) 165
PctI GAATGC 1 cut(s) 143
PfeI GAWTC 3 cut(s) 281, 932, 1016
PflFI GACNNNGTC 2 cut(s) 38, 52
PflMI CCANNNNNTGG 1 cut(s) 527
PkrI GCNGC 6 cut(s) 20, 23, 913, 1062, 1345, 1370
PleI GAGTC 1 cut(s) 962
PpsI GAGTC 1 cut(s) 962
PpuMI RGGWCCY 1 cut(s) 361
PshBI ATTAAT 1 cut(s) 275
Psp124BI GAGCTC 1 cut(s) 1011
Psp1406I AACGTT 1 cut(s) 295
Psp5II RGGWCCY 1 cut(s) 361
Psp6I CCWGG 1 cut(s) 1146
PspGI CCWGG 1 cut(s) 1146
PspN4I GGNNCC 4 cut(s) 794, 1288, 1305, 1353
PspPI GGNCC 5 cut(s) 182, 361, 768, 1156, 1286
PspPPI RGGWCCY 1 cut(s) 361
PstI CTGCAG 1 cut(s) 369
PsyI GACNNNGTC 2 cut(s) 38, 52
RsaI GTAC 2 cut(s) 952, 1317
RsaNI GTAC 2 cut(s) 951, 1316
RseI CAYNNNNRTG 1 cut(s) 833
SacI GAGCTC 1 cut(s) 1011
SatI GCNGC 6 cut(s) 19, 22, 912, 1061, 1344, 1369
Sau3AI GATC 5 cut(s) 60, 562, 726, 730, 814
Sau96I GGNCC 5 cut(s) 182, 361, 768, 1156, 1286
SchI GAGTC 1 cut(s) 962
ScrFI CCNGG 2 cut(s) 146, 1148
SduI GDGCHC 2 cut(s) 1011, 1354
SexAI ACCWGGT 1 cut(s) 1146
SfaNI GCATC 7 cut(s) 139, 220, 325, 481, 495, 529, 574
SfcI CTRYAG 1 cut(s) 365
SinI GGWCC 2 cut(s) 361, 1286
SmiI ATTTAAAT 1 cut(s) 1194
SmiMI CAYNNNNRTG 1 cut(s) 833
SmlI CTYRAG 1 cut(s) 598
SmoI CTYRAG 1 cut(s) 598
SseBI AGGCCT 1 cut(s) 1141
SsiI CCGC 2 cut(s) 85, 1060
SspMI CTAG 2 cut(s) 636, 1356
SstI GAGCTC 1 cut(s) 1011
StuI AGGCCT 1 cut(s) 1141
StyD4I CCNGG 2 cut(s) 144, 1146
StyI CCWWGG 3 cut(s) 223, 549, 1355
SwaI ATTTAAAT 1 cut(s) 1194
TaaI ACNGT 3 cut(s) 164, 237, 1037
TaiI ACGT 5 cut(s) 42, 120, 250, 298, 715
TaqI TCGA 7 cut(s) 33, 114, 159, 284, 384, 630, 729
TauI GCSGC 1 cut(s) 1063
TfiI GAWTC 3 cut(s) 281, 932, 1016
TscAI CASTG 1 cut(s) 240
TseFI GTSAC 3 cut(s) 164, 1040, 1099
TseI GCWGC 5 cut(s) 18, 21, 911, 1343, 1368
Tsp45I GTSAC 3 cut(s) 164, 1040, 1099
TspDTI ATGAA 7 cut(s) 150, 261, 315, 722, 870, 977, 1350
TspGWI ACGGA 1 cut(s) 446
TspRI CASTG 1 cut(s) 240
Tth111I GACNNNGTC 2 cut(s) 38, 52
Van91I CCANNNNNTGG 1 cut(s) 527
VpaK11BI GGWCC 2 cut(s) 361, 1286
VspI ATTAAT 1 cut(s) 275
XapI RAATTY 4 cut(s) 253, 647, 693, 1337
XmaJI CCTAGG 1 cut(s) 1355
XspI CTAG 2 cut(s) 636, 1356
ZraI GACGTC 1 cut(s) 118
Zsp2I ATGCAT 1 cut(s) 465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.