pycom16g16330

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0021841
Physical Location & Seq
Reverse (-)
12277507 .. 12280021
2515 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2244 bp
ATGGCGTCTTCCTCCAAGACCACCAGCAACCTCTCTCTGAGCGACTTGGAGCAGTTGGACGATATGAAATACGCCCCCAAAGACTACGACCAAATCCTCCAGAACATGTTGACCCAAGAAAGCATGTGTGCACAGACAATCAAGATGATTGTTGAATCGACCAGATACGGCCTCAACCTTGACGTGGCCACTGAGATCGGGTCCCAGGCCGGCAACAGTGGTATTGTTCCCAAGGTTGTCCCCCTCACAGCCGTCATGGACTACTATGCCAGTGCCGGAAGAACCAGTGATGCTTTCAAAGTGTTTCTGAAGATGTTAGCAAACGGGATAACCCCCAATGCGTACACCTATACCGTGATCATCAAGGCACTTGCTTCTTGCTCCCCCAGGGACCCTAATTTTCCACATTTCGTTAAGTTTGCGAAGATGTACTTTGTGGAAATGTTGGACAAGGGATTGCAGCCAACTCCTGGCACCTACATTGCCTTGTCTGAGAAACTTGACGAGGGCAGAGATAGAAAGGAGTTTGGAGAGCTGATTAAAGCTAAGGGGTTTGTGCTTCCTCCAGATGATTTTCATACGGCTGAGAGGGATCAGGAAATTCCATTTATCACTGAAGGCCTAGTTGAAGCTGCTTTTCGTCAAAGGAAGGTGTTTGAAGATGCAACCAAAGACACTAATGATAAGGAAATGCAACAAACATTTGAAAAGATGCGCACCAATTGGATTGTGGAAGAAGCATGGAGAATGTATCATGGTTTGTTAAAGGACAGCCAAGTTGATCAAGCCAATGAATTCTATAAACAGAACAAGAGGGGAATAATTCCCGACGTGGCCATCCACACTGTCGTGATTGAGGCCTACGCCAAAGCCGGGAAGGCTAAGGGTGCTCTCAAGGCTTACAAGCACATGTTGGCCAATGGGGTCGACCCCAATTTGTACACTTACAGTGTACTGATCAAGGCACTGACTGCTGACCTGGATTTCGTTCTGACTGCCAGGAAATACTTTCTGGAGATGTTGGACAAGGGAATACTACCCAATAGTGATATCTATGAAGCCGTGTCCAAGGGAGCTAAGGCAGAGGACAGGGAGTACATGGAGTTTGCTGACGCTGTGCTAGCTAAGGGGATAAAAGTCTTAAAGGAGAAAGATGGCAAAGAAGGCGACCCAGAAGACTTGGGAACAATCTTGCTCATGTTAGAATGTGGGATCCCATGTAAGGCTGAATCGTACAATATGATCATCAGGATGCTCGCCTTCCATAATCCTTGCCCCTCTGCTGTTCAGTATGCCAAGAAGTACTTTCTACAAATGCTTGAGAAGGGAATGCAGCCTGATTCCGGTACCTATACCCTCGTGATGGAGGCCATTGCCTGCCAATCGGACAACAAGGCGAAGGGGATAGAGGAGGCCAGAGAGTTTATGAAGCAAATTAAAGATAAGGGTCTTTTGCTTGACAATCCGAGTTATTTTGAGTTCCACGACCACCTTGAAGATGCAGTTGATACATTCAGGATGTTCGAATATGCCACCAGAACCGATGACGAGGAGATGAAAGAAATCTTCTTGAAGTGGCGCACCGATCGAGAGGCAGTCATGAAATTTGGATTTGATATGCTCAGTGGTCTGGTAGATGACGGCTATGGGGATGAGGCCTTTGAGCTTTTTGAGCCGGTCTTTGAAACAGGCATATATCCCCCCATTGTCATGCACACAGCTATCATCCAGGCCTATGTTGCTGCTGGCAAGATGAAGGGAGCTTTCGAGGCCTACCTTCGCATGTTAGCGGCTAAGATCACTCCCAACTTCTACACTTATAGTGTCCTCATCAAGGCACTCTCTGCTGATCCTAACTTGTTTAAGTCTGCCAAGGTTAACTTGCTGGATATGATGAAGAAGAAAATGCATCCTAACGCGGGTACCTACACAGCAGTGTTTGAGGGCTTTGCTCGGCAGGGGGACAAGGGAGTGGAGGAGGGAAGGGAGTTTCTGAATGAGATGAAGGGCAATGGATTTGAGCCTGACGAGGGCGCTGTGAGGGAGGTGCTGAGAGGAAGAAAAGGTGAAGTGGTCGAAGGGGTCATGGAAATTCTGTTTGACAAGTCTCACCTGCCTTGTGTTTCTGCTTTGACAAACAGGTTTCAGAACATCATTGTAATTGCTGCTGGTACCATTAAGATTAGTAATTCCAGATATGCTTTCGTATTGACTGTTGCAACTAATCGCTTAATTATGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

748

Amino Acids

84.06

Weight (kDa)

5.39

Isoelectric Point (pI)

26.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 72 - 124 6.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 77 - 125 1.9e-12 PPR repeat family
PPR_3 PF13812 270 - 323 3.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 276 - 323 1.1e-11 PPR repeat family
PPR_3 PF13812 558 - 614 3e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 569 - 614 8.2e-10 PPR repeat family
TPR_24 PF23276 572 - 655 2.1e-06 Fungal tetratrico peptide repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021841)

Species Orthologous Gene IDs
malus_domestica MD16G1177800.v1.1 MD16G1193600.v1.1
pyrus_communis pycom16g14920 pycom16g16330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2121
Acc16I TGCGCA 1 cut(s) 716
Acc36I ACCTGC 1 cut(s) 2121
Acc65I GGTACC 3 cut(s) 1346, 1922, 2171
AccB1I GGYRCC 4 cut(s) 473, 1346, 1922, 2171
AccB7I CCANNNNNTGG 1 cut(s) 470
AccI GTMKAC 1 cut(s) 927
AccII CGCG 1 cut(s) 1919
AciI CCGC 2 cut(s) 1790, 1919
AclWI GGATC 4 cut(s) 600, 1207, 1220, 1844
AcoI YGGCCR 3 cut(s) 186, 834, 915
AcsI RAATTY 4 cut(s) 600, 794, 1604, 2091
AcuI CTGAAG 2 cut(s) 329, 636
AcyI GRCGYC 1 cut(s) 5
AfiI CCNNNNNNNGG 9 cut(s) 184, 470, 873, 1222, 1343, 1363, 1834, 1919, 2030
AflIII ACRYGT 2 cut(s) 105, 909
AgsI TTSAA 8 cut(s) 155, 298, 629, 659, 707, 1496, 1573, 1685
AjiI CACGTC 2 cut(s) 184, 832
AjnI CCWGG 6 cut(s) 204, 386, 469, 978, 998, 1728
AleI CACNNNNGTG 2 cut(s) 848, 1934
AluBI AGCT 8 cut(s) 535, 545, 632, 1076, 1124, 1666, 1721, 1763
AluI AGCT 8 cut(s) 535, 545, 632, 1076, 1124, 1666, 1721, 1763
Alw21I GWGCWC 2 cut(s) 133, 892
Alw26I GTCTC 1 cut(s) 2112
Alw44I GTGCAC 1 cut(s) 129
AlwI GGATC 4 cut(s) 600, 1207, 1220, 1844
ApaLI GTGCAC 1 cut(s) 129
ApeKI GCWGC 5 cut(s) 460, 632, 1333, 1742, 2165
ApoI RAATTY 4 cut(s) 600, 794, 1604, 2091
ArsI GACNNNNNNTTYG 2 cut(s) 968, 1000
Asp718I GGTACC 3 cut(s) 1346, 1922, 2171
AspLEI GCGC 3 cut(s) 717, 1581, 2036
AspS9I GGNCC 2 cut(s) 201, 391
AsuC2I CCSGG 1 cut(s) 874
AsuHPI GGTGA 2 cut(s) 2078, 2102
AsuII TTCGAA 1 cut(s) 1524
AsuNHI GCTAGC 1 cut(s) 1120
AvaII GGWCC 2 cut(s) 201, 391
BaeGI GKGCMC 1 cut(s) 133
BaeI ACNNNNGTAYC 2 cut(s) 1906, 1939
BalI TGGCCA 3 cut(s) 188, 836, 917
BamHI GGATCC 1 cut(s) 1212
BanI GGYRCC 4 cut(s) 473, 1346, 1922, 2171
BauI CACGAG 1 cut(s) 1358
BbsI GAAGAC 1 cut(s) 1182
Bbv12I GWGCWC 2 cut(s) 133, 892
BbvI GCAGC 5 cut(s) 472, 619, 1345, 1729, 2152
BccI CCATC 3 cut(s) 845, 1148, 1357
BceAI ACGGC 5 cut(s) 184, 236, 597, 1046, 1657
BciT130I CCWGG 6 cut(s) 206, 388, 471, 980, 1000, 1730
BclI TGATCA 4 cut(s) 357, 781, 957, 1242
BcnI CCSGG 1 cut(s) 874
BcoDI GTCTC 1 cut(s) 2112
BfaI CTAG 2 cut(s) 623, 1121
BfoI RGCGCY 1 cut(s) 2037
BfuAI ACCTGC 1 cut(s) 2121
BglI GCCNNNNNGGC 1 cut(s) 878
BisI GCNGC 6 cut(s) 461, 633, 1334, 1743, 1791, 2166
BlsI GCNGC 6 cut(s) 462, 634, 1335, 1744, 1792, 2167
BmcAI AGTACT 1 cut(s) 1304
Bme1390I CCNGG 7 cut(s) 206, 388, 471, 874, 980, 1000, 1730
Bme18I GGWCC 2 cut(s) 201, 391
BmgBI CACGTC 2 cut(s) 184, 832
BmgT120I GGNCC 2 cut(s) 201, 391
BmiI GGNNCC 9 cut(s) 202, 203, 392, 393, 475, 1214, 1348, 1924, 2173
BmrFI CCNGG 7 cut(s) 206, 388, 471, 874, 980, 1000, 1730
BmsI GCATC 6 cut(s) 280, 652, 702, 1242, 1489, 1918
BmtI GCTAGC 1 cut(s) 1124
BpiI GAAGAC 1 cut(s) 1182
BpmI CTGGAG 3 cut(s) 83, 549, 1034
Bpu10I CCTNAGC 4 cut(s) 546, 882, 1077, 1125
Bpu14I TTCGAA 1 cut(s) 1524
BpuEI CTTGAG 2 cut(s) 878, 1340
BpuMI CCSGG 1 cut(s) 874
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 6 cut(s) 204, 231, 386, 387, 1068, 1872
BsaWI WCCGGW 1 cut(s) 1343
Bsc4I CCNNNNNNNGG 9 cut(s) 184, 470, 873, 1222, 1343, 1363, 1834, 1919, 2030
Bse118I RCCGGY 2 cut(s) 209, 1675
Bse1I ACTGG 2 cut(s) 270, 285
Bse3DI GCAATG 3 cut(s) 480, 1371, 2017
BseBI CCWGG 6 cut(s) 206, 388, 471, 980, 1000, 1730
BseDI CCNNGG 6 cut(s) 204, 231, 386, 387, 1068, 1872
BseGI GGATG 6 cut(s) 837, 1257, 1524, 1657, 1725, 1909
BseLI CCNNNNNNNGG 9 cut(s) 184, 470, 873, 1222, 1343, 1363, 1834, 1919, 2030
BseMI GCAATG 3 cut(s) 480, 1371, 2017
BseMII CTCAG 6 cut(s) 29, 183, 483, 576, 1636, 2042
BseNI ACTGG 2 cut(s) 270, 285
BseRI GAGGAG 3 cut(s) 1424, 1565, 1991
BseSI GKGCMC 1 cut(s) 133
BseXI GCAGC 5 cut(s) 472, 619, 1345, 1729, 2152
Bsh1236I CGCG 1 cut(s) 1919
Bsh1285I CGRYCG 1 cut(s) 1588
BshNI GGYRCC 4 cut(s) 473, 1346, 1922, 2171
BsiEI CGRYCG 1 cut(s) 1588
BsiHKAI GWGCWC 2 cut(s) 133, 892
BsiSI CCGG 5 cut(s) 210, 276, 873, 1344, 1676
BslFI GGGAC 4 cut(s) 187, 224, 404, 1976
BslI CCNNNNNNNGG 9 cut(s) 184, 470, 873, 1222, 1343, 1363, 1834, 1919, 2030
BsmAI GTCTC 1 cut(s) 2112
BsmFI GGGAC 4 cut(s) 187, 224, 404, 1976
BsmI GAATGC 1 cut(s) 1335
Bsp119I TTCGAA 1 cut(s) 1524
Bsp1286I GDGCHC 2 cut(s) 133, 892
Bsp1407I TGTACA 1 cut(s) 939
BspACI CCGC 2 cut(s) 1790, 1919
BspCNI CTCAG 6 cut(s) 30, 184, 484, 577, 1635, 2043
BspFNI CGCG 1 cut(s) 1919
BspHI TCATGA 1 cut(s) 1599
BspLI GGNNCC 9 cut(s) 202, 203, 392, 393, 475, 1214, 1348, 1924, 2173
BspMI ACCTGC 1 cut(s) 2121
BspOI GCTAGC 1 cut(s) 1124
BspPI GGATC 4 cut(s) 600, 1207, 1220, 1844
BspT104I TTCGAA 1 cut(s) 1524
BspT107I GGYRCC 4 cut(s) 473, 1346, 1922, 2171
BsrDI GCAATG 3 cut(s) 480, 1371, 2017
BsrFI RCCGGY 2 cut(s) 209, 1675
BsrGI TGTACA 1 cut(s) 939
BsrI ACTGG 2 cut(s) 270, 285
BssAI RCCGGY 2 cut(s) 209, 1675
BssECI CCNNGG 6 cut(s) 204, 231, 386, 387, 1068, 1872
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 1358
BssT1I CCWWGG 3 cut(s) 231, 1068, 1872
Bst2BI CACGAG 1 cut(s) 1358
Bst2UI CCWGG 6 cut(s) 206, 388, 471, 980, 1000, 1730
Bst4CI ACNGT 5 cut(s) 218, 355, 847, 950, 2215
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 2 cut(s) 971, 1844
BstAUI TGTACA 1 cut(s) 939
BstBI TTCGAA 1 cut(s) 1524
BstC8I GCNNGC 5 cut(s) 211, 1122, 1257, 1378, 1747
BstENI CCTNNNNNAGG 1 cut(s) 1832
BstF5I GGATG 6 cut(s) 837, 1257, 1524, 1657, 1725, 1909
BstFNI CGCG 1 cut(s) 1919
BstH2I RGCGCY 1 cut(s) 2037
BstHHI GCGC 3 cut(s) 717, 1581, 2036
BstMAI GTCTC 1 cut(s) 2112
BstMCI CGRYCG 1 cut(s) 1588
BstNI CCWGG 6 cut(s) 206, 388, 471, 980, 1000, 1730
BstNSI RCATGY 4 cut(s) 109, 127, 913, 1786
BstSCI CCNGG 7 cut(s) 204, 386, 469, 872, 978, 998, 1728
BstSLI GKGCMC 1 cut(s) 133
BstUI CGCG 1 cut(s) 1919
BstV1I GCAGC 5 cut(s) 472, 619, 1345, 1729, 2152
BstV2I GAAGAC 1 cut(s) 1182
BstX2I RGATCY 1 cut(s) 1212
BstYI RGATCY 1 cut(s) 1212
BtrI CACGTC 2 cut(s) 184, 832
BtsCI GGATG 6 cut(s) 837, 1257, 1524, 1657, 1725, 1909
BtsI GCAGTG 1 cut(s) 1941
BveI ACCTGC 1 cut(s) 2121
Cac8I GCNNGC 5 cut(s) 211, 1122, 1257, 1378, 1747
CciI TCATGA 1 cut(s) 1599
CfoI GCGC 3 cut(s) 717, 1581, 2036
Cfr10I RCCGGY 2 cut(s) 209, 1675
Cfr13I GGNCC 2 cut(s) 201, 391
CseI GACGC 1 cut(s) 1121
EaeI YGGCCR 3 cut(s) 186, 834, 915
Eco130I CCWWGG 3 cut(s) 231, 1068, 1872
Eco147I AGGCCT 5 cut(s) 621, 860, 1658, 1733, 1772
Eco32I GATATC 1 cut(s) 1051
Eco47I GGWCC 2 cut(s) 201, 391
Eco57I CTGAAG 2 cut(s) 329, 636
EcoNI CCTNNNNNAGG 1 cut(s) 1832
EcoO109I RGGNCCY 2 cut(s) 201, 391
EcoRI GAATTC 1 cut(s) 794
EcoRII CCWGG 6 cut(s) 204, 386, 469, 978, 998, 1728
EcoRV GATATC 1 cut(s) 1051
EcoT14I CCWWGG 3 cut(s) 231, 1068, 1872
EcoT22I ATGCAT 1 cut(s) 1911
ErhI CCWWGG 3 cut(s) 231, 1068, 1872
FalI AAGNNNNNCTT 6 cut(s) 416, 448, 1289, 1321, 1865, 1897
FaqI GGGAC 4 cut(s) 187, 224, 404, 1976
FauI CCCGC 1 cut(s) 1912
FbaI TGATCA 4 cut(s) 357, 781, 957, 1242
FblI GTMKAC 1 cut(s) 927
Fnu4HI GCNGC 6 cut(s) 461, 633, 1334, 1743, 1791, 2166
FokI GGATG 6 cut(s) 824, 1264, 1531, 1664, 1712, 1896
Fsp4HI GCNGC 6 cut(s) 461, 633, 1334, 1743, 1791, 2166
FspAI RTGCGCAY 1 cut(s) 716
FspBI CTAG 2 cut(s) 623, 1121
FspI TGCGCA 1 cut(s) 716
GlaI GCGC 3 cut(s) 716, 1580, 2035
GluI GCNGC 6 cut(s) 461, 633, 1334, 1743, 1791, 2166
GsuI CTGGAG 3 cut(s) 83, 549, 1034
HaeII RGCGCY 1 cut(s) 2037
HapII CCGG 5 cut(s) 210, 276, 873, 1344, 1676
HgaI GACGC 1 cut(s) 1121
HhaI GCGC 3 cut(s) 717, 1581, 2036
Hin1I GRCGYC 1 cut(s) 5
Hin6I GCGC 3 cut(s) 715, 1579, 2034
HinP1I GCGC 3 cut(s) 715, 1579, 2034
HincII GTYRAC 3 cut(s) 111, 928, 1879
HindII GTYRAC 3 cut(s) 111, 928, 1879
HinfI GANTC 3 cut(s) 155, 1229, 1340
HpaI GTTAAC 1 cut(s) 1879
HpaII CCGG 5 cut(s) 210, 276, 873, 1344, 1676
HphI GGTGA 2 cut(s) 2078, 2102
Hpy166II GTNNAC 7 cut(s) 111, 131, 345, 928, 942, 953, 1879
Hpy188I TCNGA 8 cut(s) 39, 309, 493, 993, 1387, 1467, 1995, 2148
Hpy8I GTNNAC 7 cut(s) 111, 131, 345, 928, 942, 953, 1879
Hpy99I CGWCG 1 cut(s) 833
HpyCH4III ACNGT 5 cut(s) 218, 355, 847, 950, 2215
HpyCH4IV ACGT 2 cut(s) 183, 831
HpyCH4V TGCA 9 cut(s) 131, 460, 665, 694, 1333, 1502, 1714, 1909, 2219
HpySE526I ACGT 2 cut(s) 183, 831
Hsp92I GRCGYC 1 cut(s) 5
HspAI GCGC 3 cut(s) 715, 1579, 2034
KflI GGGWCCC 2 cut(s) 201, 391
KpnI GGTACC 3 cut(s) 1350, 1926, 2175
KroI GCCGGC 1 cut(s) 209
KroNI GCCGGC 1 cut(s) 211
Ksp22I TGATCA 4 cut(s) 357, 781, 957, 1242
KspAI GTTAAC 1 cut(s) 1879
LmnI GCTCC 4 cut(s) 49, 386, 1073, 1760
Lsp1109I GCAGC 5 cut(s) 472, 619, 1345, 1729, 2152
LweI GCATC 6 cut(s) 280, 652, 702, 1242, 1489, 1918
MaeI CTAG 2 cut(s) 623, 1121
MaeII ACGT 2 cut(s) 183, 831
MfeI CAATTG 1 cut(s) 721
MflI RGATCY 1 cut(s) 1212
MhlI GDGCHC 2 cut(s) 133, 892
MlsI TGGCCA 3 cut(s) 188, 836, 917
MluNI TGGCCA 3 cut(s) 188, 836, 917
MmeI TCCRAC 3 cut(s) 36, 426, 1002
Mox20I TGGCCA 3 cut(s) 188, 836, 917
Mph1103I ATGCAT 1 cut(s) 1911
MroNI GCCGGC 1 cut(s) 209
MscI TGGCCA 3 cut(s) 188, 836, 917
MseI TTAA 9 cut(s) 414, 540, 764, 1142, 1437, 1863, 1878, 2178, 2231
MslI CAYNNNNRTG 4 cut(s) 848, 1250, 1709, 1934
Msp20I TGGCCA 3 cut(s) 188, 836, 917
MspI CCGG 5 cut(s) 210, 276, 873, 1344, 1676
MspR9I CCNGG 7 cut(s) 206, 388, 471, 874, 980, 1000, 1730
MunI CAATTG 1 cut(s) 721
Mva1269I GAATGC 1 cut(s) 1335
MvaI CCWGG 6 cut(s) 206, 388, 471, 980, 1000, 1730
MvnI CGCG 1 cut(s) 1919
NaeI GCCGGC 1 cut(s) 211
NciI CCSGG 1 cut(s) 874
NgoMIV GCCGGC 1 cut(s) 209
NheI GCTAGC 1 cut(s) 1120
NlaIV GGNNCC 9 cut(s) 202, 203, 392, 393, 475, 1214, 1348, 1924, 2173
NmeAIII GCCGAG 1 cut(s) 1933
NsbI TGCGCA 1 cut(s) 716
NsiI ATGCAT 1 cut(s) 1911
NspI RCATGY 4 cut(s) 109, 127, 913, 1786
NspV TTCGAA 1 cut(s) 1524
OliI CACNNNNGTG 2 cut(s) 848, 1934
PagI TCATGA 1 cut(s) 1599
PaqCI CACCTGC 1 cut(s) 2121
PasI CCCWGGG 1 cut(s) 387
PceI AGGCCT 5 cut(s) 621, 860, 1658, 1733, 1772
PciI ACATGT 2 cut(s) 105, 909
PctI GAATGC 1 cut(s) 1335
PdiI GCCGGC 1 cut(s) 211
PfeI GAWTC 3 cut(s) 155, 1229, 1340
PflMI CCANNNNNTGG 1 cut(s) 470
PkrI GCNGC 6 cut(s) 462, 634, 1335, 1744, 1792, 2167
Ple19I CGATCG 1 cut(s) 1588
PpuMI RGGWCCY 2 cut(s) 201, 391
PscI ACATGT 2 cut(s) 105, 909
Psp5II RGGWCCY 2 cut(s) 201, 391
Psp6I CCWGG 6 cut(s) 204, 386, 469, 978, 998, 1728
PspGI CCWGG 6 cut(s) 204, 386, 469, 978, 998, 1728
PspN4I GGNNCC 9 cut(s) 202, 203, 392, 393, 475, 1214, 1348, 1924, 2173
PspPI GGNCC 2 cut(s) 201, 391
PspPPI RGGWCCY 2 cut(s) 201, 391
PsuI RGATCY 1 cut(s) 1212
PvuI CGATCG 1 cut(s) 1588
RseI CAYNNNNRTG 4 cut(s) 848, 1250, 1709, 1934
SalI GTCGAC 1 cut(s) 926
SaqAI TTAA 9 cut(s) 414, 540, 764, 1142, 1437, 1863, 1878, 2178, 2231
SatI GCNGC 6 cut(s) 461, 633, 1334, 1743, 1791, 2166
Sau96I GGNCC 2 cut(s) 201, 391
ScaI AGTACT 1 cut(s) 1304
ScrFI CCNGG 7 cut(s) 206, 388, 471, 874, 980, 1000, 1730
SduI GDGCHC 2 cut(s) 133, 892
SfaNI GCATC 6 cut(s) 280, 652, 702, 1242, 1489, 1918
SfuI TTCGAA 1 cut(s) 1524
SinI GGWCC 2 cut(s) 201, 391
SmiMI CAYNNNNRTG 4 cut(s) 848, 1250, 1709, 1934
SmlI CTYRAG 2 cut(s) 893, 1319
SmoI CTYRAG 2 cut(s) 893, 1319
SseBI AGGCCT 5 cut(s) 621, 860, 1658, 1733, 1772
SsiI CCGC 2 cut(s) 1790, 1919
SspMI CTAG 2 cut(s) 623, 1121
StuI AGGCCT 5 cut(s) 621, 860, 1658, 1733, 1772
StyD4I CCNGG 7 cut(s) 204, 386, 469, 872, 978, 998, 1728
StyI CCWWGG 3 cut(s) 231, 1068, 1872
TaaI ACNGT 5 cut(s) 218, 355, 847, 950, 2215
TaiI ACGT 2 cut(s) 186, 834
TaqI TCGA 6 cut(s) 158, 927, 1524, 1588, 1767, 2076
TatI WGTACW 5 cut(s) 429, 939, 952, 1095, 1302
TauI GCSGC 1 cut(s) 1793
TfiI GAWTC 3 cut(s) 155, 1229, 1340
Tru1I TTAA 9 cut(s) 414, 540, 764, 1142, 1437, 1863, 1878, 2178, 2231
Tru9I TTAA 9 cut(s) 414, 540, 764, 1142, 1437, 1863, 1878, 2178, 2231
TseI GCWGC 5 cut(s) 460, 632, 1333, 1742, 2165
Van91I CCANNNNNTGG 1 cut(s) 470
VneI GTGCAC 1 cut(s) 129
VpaK11BI GGWCC 2 cut(s) 201, 391
XagI CCTNNNNNAGG 1 cut(s) 1832
XapI RAATTY 4 cut(s) 600, 794, 1604, 2091
XceI RCATGY 4 cut(s) 109, 127, 913, 1786
XcmI CCANNNNNNNNNTGG 1 cut(s) 727
XmiI GTMKAC 1 cut(s) 927
XspI CTAG 2 cut(s) 623, 1121
ZrmI AGTACT 1 cut(s) 1304
Zsp2I ATGCAT 1 cut(s) 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.