Isocitrate dehydrogenase NADP
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g02640 pycom15g26590 pycom15g31240 pycom16g18660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 42 |
| AclWI | GGATC | 1 cut(s) | 183 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AgsI | TTSAA | 1 cut(s) | 367 |
| AjnI | CCWGG | 1 cut(s) | 274 |
| Alw26I | GTCTC | 3 cut(s) | 51, 139, 340 |
| AlwI | GGATC | 1 cut(s) | 183 |
| AoxI | GGCC | 1 cut(s) | 165 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 243 |
| AspS9I | GGNCC | 1 cut(s) | 165 |
| BciT130I | CCWGG | 1 cut(s) | 276 |
| BcoDI | GTCTC | 3 cut(s) | 51, 139, 340 |
| BfaI | CTAG | 2 cut(s) | 149, 264 |
| Bme1390I | CCNGG | 1 cut(s) | 276 |
| BmgT120I | GGNCC | 1 cut(s) | 165 |
| BmiI | GGNNCC | 1 cut(s) | 166 |
| BmrFI | CCNGG | 1 cut(s) | 276 |
| BmsI | GCATC | 1 cut(s) | 438 |
| BsaI | GGTCTC | 1 cut(s) | 51 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseBI | CCWGG | 1 cut(s) | 276 |
| BseGI | GGATG | 1 cut(s) | 258 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BslFI | GGGAC | 1 cut(s) | 308 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BsmAI | GTCTC | 3 cut(s) | 51, 139, 340 |
| BsmFI | GGGAC | 1 cut(s) | 308 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| BsnI | GGCC | 1 cut(s) | 167 |
| Bso31I | GGTCTC | 1 cut(s) | 51 |
| Bsp143I | GATC | 1 cut(s) | 175 |
| BspACI | CCGC | 1 cut(s) | 42 |
| BspANI | GGCC | 1 cut(s) | 167 |
| BspHI | TCATGA | 1 cut(s) | 235 |
| BspLI | GGNNCC | 1 cut(s) | 166 |
| BspPI | GGATC | 1 cut(s) | 183 |
| BspTNI | GGTCTC | 1 cut(s) | 51 |
| BssMI | GATC | 1 cut(s) | 175 |
| Bst2UI | CCWGG | 1 cut(s) | 276 |
| BstDEI | CTNAG | 1 cut(s) | 50 |
| BstF5I | GGATG | 1 cut(s) | 258 |
| BstKTI | GATC | 1 cut(s) | 178 |
| BstMAI | GTCTC | 3 cut(s) | 51, 139, 340 |
| BstMBI | GATC | 1 cut(s) | 175 |
| BstNI | CCWGG | 1 cut(s) | 276 |
| BstNSI | RCATGY | 1 cut(s) | 317 |
| BstSCI | CCNGG | 1 cut(s) | 274 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| BtsCI | GGATG | 1 cut(s) | 258 |
| CciI | TCATGA | 1 cut(s) | 235 |
| Cfr13I | GGNCC | 1 cut(s) | 165 |
| CviAII | CATG | 4 cut(s) | 236, 298, 314, 374 |
| CviJI | RGCY | 4 cut(s) | 167, 296, 383, 500 |
| CviKI_1 | RGCY | 4 cut(s) | 167, 296, 383, 500 |
| DdeI | CTNAG | 1 cut(s) | 50 |
| DpnI | GATC | 1 cut(s) | 177 |
| DpnII | GATC | 1 cut(s) | 175 |
| DraI | TTTAAA | 1 cut(s) | 78 |
| Eco31I | GGTCTC | 1 cut(s) | 51 |
| EcoRII | CCWGG | 1 cut(s) | 274 |
| FaeI | CATG | 4 cut(s) | 239, 301, 317, 377 |
| FaqI | GGGAC | 1 cut(s) | 308 |
| FatI | CATG | 4 cut(s) | 235, 297, 313, 373 |
| FauI | CCCGC | 1 cut(s) | 35 |
| FokI | GGATG | 1 cut(s) | 245 |
| FspBI | CTAG | 2 cut(s) | 149, 264 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 239, 301, 317, 377 |
| HincII | GTYRAC | 1 cut(s) | 489 |
| HindII | GTYRAC | 1 cut(s) | 489 |
| HinfI | GANTC | 1 cut(s) | 333 |
| Hpy166II | GTNNAC | 2 cut(s) | 358, 489 |
| Hpy188I | TCNGA | 2 cut(s) | 15, 106 |
| Hpy188III | TCNNGA | 1 cut(s) | 236 |
| Hpy8I | GTNNAC | 2 cut(s) | 358, 489 |
| Hpy99I | CGWCG | 1 cut(s) | 496 |
| HpyAV | CCTTC | 1 cut(s) | 323 |
| HpyCH4IV | ACGT | 1 cut(s) | 491 |
| HpyCH4V | TGCA | 1 cut(s) | 347 |
| HpyF3I | CTNAG | 1 cut(s) | 50 |
| HpySE526I | ACGT | 1 cut(s) | 491 |
| Hsp92II | CATG | 4 cut(s) | 239, 301, 317, 377 |
| Kzo9I | GATC | 1 cut(s) | 175 |
| LpnPI | CCDG | 6 cut(s) | 105, 173, 261, 288, 339, 354 |
| LweI | GCATC | 1 cut(s) | 438 |
| MaeI | CTAG | 2 cut(s) | 149, 264 |
| MaeII | ACGT | 1 cut(s) | 491 |
| MalI | GATC | 1 cut(s) | 177 |
| MboI | GATC | 1 cut(s) | 175 |
| MboII | GAAGA | 4 cut(s) | 98, 147, 203, 301 |
| MluCI | AATT | 1 cut(s) | 361 |
| MlyI | GAGTC | 1 cut(s) | 342 |
| MmeI | TCCRAC | 1 cut(s) | 266 |
| MnlI | CCTC | 2 cut(s) | 19, 400 |
| MroXI | GAANNNNTTC | 1 cut(s) | 243 |
| MseI | TTAA | 1 cut(s) | 77 |
| MslI | CAYNNNNRTG | 1 cut(s) | 105 |
| MspR9I | CCNGG | 1 cut(s) | 276 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MvaI | CCWGG | 1 cut(s) | 276 |
| NdeII | GATC | 1 cut(s) | 175 |
| NlaIII | CATG | 4 cut(s) | 239, 301, 317, 377 |
| NlaIV | GGNNCC | 1 cut(s) | 166 |
| NspI | RCATGY | 1 cut(s) | 317 |
| PagI | TCATGA | 1 cut(s) | 235 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PdmI | GAANNNNTTC | 1 cut(s) | 243 |
| PleI | GAGTC | 1 cut(s) | 341 |
| PpsI | GAGTC | 1 cut(s) | 341 |
| Psp6I | CCWGG | 1 cut(s) | 274 |
| PspGI | CCWGG | 1 cut(s) | 274 |
| PspN4I | GGNNCC | 1 cut(s) | 166 |
| PspPI | GGNCC | 1 cut(s) | 165 |
| RseI | CAYNNNNRTG | 1 cut(s) | 105 |
| SaqAI | TTAA | 1 cut(s) | 77 |
| Sau3AI | GATC | 1 cut(s) | 175 |
| Sau96I | GGNCC | 1 cut(s) | 165 |
| SchI | GAGTC | 1 cut(s) | 342 |
| ScrFI | CCNGG | 1 cut(s) | 276 |
| SetI | ASST | 8 cut(s) | 84, 130, 154, 204, 244, 411, 441, 494 |
| SfaNI | GCATC | 1 cut(s) | 438 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 105 |
| Sse9I | AATT | 1 cut(s) | 361 |
| SsiI | CCGC | 1 cut(s) | 42 |
| SspMI | CTAG | 2 cut(s) | 149, 264 |
| StyD4I | CCNGG | 1 cut(s) | 274 |
| TaiI | ACGT | 1 cut(s) | 494 |
| TaqI | TCGA | 1 cut(s) | 469 |
| TasI | AATT | 1 cut(s) | 361 |
| Tru1I | TTAA | 1 cut(s) | 77 |
| Tru9I | TTAA | 1 cut(s) | 77 |
| TspDTI | ATGAA | 3 cut(s) | 105, 224, 252 |
| TspGWI | ACGGA | 1 cut(s) | 38 |
| XceI | RCATGY | 1 cut(s) | 317 |
| XmnI | GAANNNNTTC | 1 cut(s) | 243 |
| XspI | CTAG | 2 cut(s) | 149, 264 |