pycom16g25420

MOB kinase activator-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
27261650 .. 27265023
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g25420.4

Sequence Viewer

Length: 363 bp
ATGACTGCAGGCCCCAAGTATGAGTATAGGTGGGCTGATGGTGTACTAATTAAGAAACCTATTGAGGTTTCGGCTCCAAAATATGTTGAATATCTAATGGACTGGATTGAATCTCAACTTGATGATGAATCCATATTTCCCCAAAAGCTTGGTGCACCATTTCCCCCCAATTTCAGGGAGGTTGTGAAGACGATATTCAAAAGACTGTTCCTTACAATTGAAAAATGTCGTACATGGGAAGTAAATCTCTGCGAGCTAGTCCTTCAGCTCCCAAAGTACCTGATAGGAGAATTCGTGCTAATTGACAAGAAGGAGCTAGCTCCACTGCAAGAGCTTATAGAATCCATCGTTGTTCCTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

121

Amino Acids

14.06

Weight (kDa)

5.06

Isoelectric Point (pI)

48.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029482)

Species Orthologous Gene IDs
pyrus_communis pycom16g25420
rosa_roxburghii Rroxscaffold_3G00246160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 290
AcuI CTGAAG 1 cut(s) 248
AfaI GTAC 3 cut(s) 45, 232, 278
AfiI CCNNNNNNNGG 1 cut(s) 174
AgsI TTSAA 4 cut(s) 89, 110, 199, 221
AluBI AGCT 6 cut(s) 148, 256, 268, 316, 320, 334
AluI AGCT 6 cut(s) 148, 256, 268, 316, 320, 334
Alw21I GWGCWC 1 cut(s) 157
Alw44I GTGCAC 1 cut(s) 153
AoxI GGCC 1 cut(s) 10
ApaLI GTGCAC 1 cut(s) 153
ApoI RAATTY 1 cut(s) 290
AspS9I GGNCC 1 cut(s) 11
AsuNHI GCTAGC 1 cut(s) 316
BaeGI GKGCMC 1 cut(s) 157
BbsI GAAGAC 1 cut(s) 194
Bbv12I GWGCWC 1 cut(s) 157
BccI CCATC 2 cut(s) 32, 353
BfaI CTAG 2 cut(s) 257, 317
BfmI CTRYAG 1 cut(s) 6
BmgT120I GGNCC 1 cut(s) 11
BmiI GGNNCC 2 cut(s) 13, 75
BmtI GCTAGC 1 cut(s) 320
BpiI GAAGAC 1 cut(s) 194
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 1 cut(s) 174
Bse1I ACTGG 1 cut(s) 107
BseLI CCNNNNNNNGG 1 cut(s) 174
BseNI ACTGG 1 cut(s) 107
BseSI GKGCMC 1 cut(s) 157
BshFI GGCC 1 cut(s) 12
BsiHKAI GWGCWC 1 cut(s) 157
BslI CCNNNNNNNGG 1 cut(s) 174
BsnI GGCC 1 cut(s) 12
Bsp1286I GDGCHC 1 cut(s) 157
BspANI GGCC 1 cut(s) 12
BspLI GGNNCC 2 cut(s) 13, 75
BspMAI CTGCAG 1 cut(s) 10
BspOI GCTAGC 1 cut(s) 320
BsrI ACTGG 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 207
BstC8I GCNNGC 3 cut(s) 10, 254, 318
BstSFI CTRYAG 1 cut(s) 6
BstSLI GKGCMC 1 cut(s) 157
BstV2I GAAGAC 1 cut(s) 194
BstXI CCANNNNNNTGG 1 cut(s) 149
BsuRI GGCC 1 cut(s) 12
BtsI GCAGTG 1 cut(s) 323
BtsIMutI CAGTG 1 cut(s) 323
Cac8I GCNNGC 3 cut(s) 10, 254, 318
Cfr13I GGNCC 1 cut(s) 11
Csp6I GTAC 3 cut(s) 44, 231, 277
CviAII CATG 1 cut(s) 234
CviJI RGCY 9 cut(s) 12, 35, 74, 148, 256, 268, 316, 320, 334
CviKI_1 RGCY 9 cut(s) 12, 35, 74, 148, 256, 268, 316, 320, 334
CviQI GTAC 3 cut(s) 44, 231, 277
Eco57I CTGAAG 1 cut(s) 248
EcoO109I RGGNCCY 1 cut(s) 11
EcoRI GAATTC 1 cut(s) 290
FaeI CATG 1 cut(s) 237
FaiI YATR 6 cut(s) 21, 27, 84, 134, 235, 338
FatI CATG 1 cut(s) 233
FspBI CTAG 2 cut(s) 257, 317
HaeIII GGCC 1 cut(s) 12
Hin1II CATG 1 cut(s) 237
HindIII AAGCTT 1 cut(s) 146
HinfI GANTC 3 cut(s) 110, 128, 341
Hpy166II GTNNAC 2 cut(s) 44, 155
Hpy8I GTNNAC 2 cut(s) 44, 155
HpyAV CCTTC 2 cut(s) 272, 304
HpyCH4III ACNGT 1 cut(s) 207
HpyCH4V TGCA 3 cut(s) 8, 155, 328
Hsp92II CATG 1 cut(s) 237
LmnI GCTCC 4 cut(s) 79, 273, 313, 325
LpnPI CCDG 3 cut(s) 88, 160, 293
MaeI CTAG 2 cut(s) 257, 317
MboII GAAGA 1 cut(s) 199
MfeI CAATTG 1 cut(s) 216
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 5 cut(s) 48, 169, 216, 290, 300
MnlI CCTC 2 cut(s) 58, 172
MseI TTAA 1 cut(s) 51
MunI CAATTG 1 cut(s) 216
NheI GCTAGC 1 cut(s) 316
NlaIII CATG 1 cut(s) 237
NlaIV GGNNCC 2 cut(s) 13, 75
PfeI GAWTC 3 cut(s) 110, 128, 341
PspN4I GGNNCC 2 cut(s) 13, 75
PspPI GGNCC 1 cut(s) 11
PstI CTGCAG 1 cut(s) 10
RsaI GTAC 3 cut(s) 45, 232, 278
RsaNI GTAC 3 cut(s) 44, 231, 277
SaqAI TTAA 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 11
SduI GDGCHC 1 cut(s) 157
SfcI CTRYAG 1 cut(s) 6
Sse9I AATT 5 cut(s) 48, 169, 216, 290, 300
SspMI CTAG 2 cut(s) 257, 317
TaaI ACNGT 1 cut(s) 207
TasI AATT 5 cut(s) 48, 169, 216, 290, 300
TatI WGTACW 1 cut(s) 43
TfiI GAWTC 3 cut(s) 110, 128, 341
Tru1I TTAA 1 cut(s) 51
Tru9I TTAA 1 cut(s) 51
TscAI CASTG 1 cut(s) 330
TspDTI ATGAA 1 cut(s) 141
TspRI CASTG 1 cut(s) 330
VneI GTGCAC 1 cut(s) 153
XapI RAATTY 1 cut(s) 290
XspI CTAG 2 cut(s) 257, 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.