pycom17g05640

Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
4014384 .. 4016622
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1212 bp
ATGGCAGCTTCCCAATTCTCTGCAACTCGCAGCGGACCAGAGGCAGTGTGGCATTGCAAGTCGCAATCCAAATTGATCGATTTCTGTTCCAGGAAGAACAAATCCAAGCTTTTGTTCACAAGGACCTCGAACCGGAGGCGGTCGTTTTCCTTCTCCGTGAAGAACGTTCTGGACAAGCCTCACGAGCTCAAGGATCCGATCATCGAACAAGATGCTGCAAGCGCATTCAGCTCATTCACACCAGATGCTGCATCCATCGCTTCAAGCATCAAATACCACGCAGAGTTCACCCCGTTGTTTTCTCCGGAGCAATTTGAGCTTCCAAAGGCCTTCTATGCAACTGCACAAAGTGTTCGTGATGCGCTCATTGTTAACTTGAATGCAACAAATAATTATTATGAAAAATTGAATGCAAAGCAGGCATATTATTTGTCAATGGAATTTTTGCAGGGTAGAGCGCTGTTAAATGCCGTTGGTAATTTAGAGCTAGATGGTGCATATGCTGAGGCTTTAAGCAAACTTGGACACAAATTAGAAAATGTTGCTAACCAGGAGCCAGATGCTGCACTTGGAAACGGGGGTCTTGGTCGGCTTGCCTCTTGCTTCTTGGACTCTTTGGCAACTTTAAATTATCCGGCTTGGGGTTATGGACTCAGGTACAAGTATGGCTTATTTAAACAGCGAATTACAAAAGATGGTCAAGAAGAAGTTGCTGAGGATTGGCTTGAGATGGGCAATCCATGGGAGATTGTGAGAAATGATGTCTCCTATCCAATAAAATTCTATGGAAAGGTTGTTACTGGATCGGATGGAAAACGACATTGGATTGGGGGAGAAGACATAGATGCTGTTGCCTATGATGTTCCAATACCAGGATACAAAACTAAAACCACGGTCAACTTGCGGCTTTGGTCGACGAAAGCTTCATCACAGGATCTTGATTTATATGCTTTTAATTCTGGAGAGCACACGAAGGCATCTGAAGCTTTAGCAAATGCTGAAAAGATTTGCTACATACTTTATCCTGGAGATGAATCAATGGAGGGCAAGGCACTTCGTTTGAAGCAACAATATACTTTATGTTCTGCTTCTCTTCAAGATATCGTTGCACGTTTTGAGAGAACGATCTGGAGCAAATGTCAAATGGCAAGAGTTCCCCGAGAAGGTTGCAGTGCAGATGAACGATACTCATCCAACCCTCTGCATCCCTGA

Protein Analysis

404

Amino Acids

45.04

Weight (kDa)

7.56

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phosphorylase PF00343 172 - 375 3.1e-79 Carbohydrate phosphorylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022413)

Species Orthologous Gene IDs
malus_domestica MD00G1036900.v1.1
pyrus_communis pycom06g01700 pycom1134g00010 pycom17g05640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 914
AccIII TCCGGA 1 cut(s) 304
AciI CCGC 3 cut(s) 33, 139, 904
AclI AACGTT 1 cut(s) 165
AclWI GGATC 4 cut(s) 188, 201, 811, 942
AcsI RAATTY 2 cut(s) 440, 779
AcuI CTGAAG 1 cut(s) 1002
AdeI CACNNNGTG 1 cut(s) 350
AfaI GTAC 1 cut(s) 659
AfeI AGCGCT 1 cut(s) 459
AfiI CCNNNNNNNGG 4 cut(s) 132, 641, 872, 1163
AgsI TTSAA 5 cut(s) 264, 379, 409, 1063, 1097
AjnI CCWGG 4 cut(s) 89, 549, 871, 1024
AjuI GAANNNNNNNTTGG 4 cut(s) 98, 130, 805, 837
AluBI AGCT 8 cut(s) 8, 109, 187, 231, 319, 487, 923, 986
AluI AGCT 8 cut(s) 8, 109, 187, 231, 319, 487, 923, 986
Alw21I GWGCWC 2 cut(s) 189, 969
Alw26I GTCTC 1 cut(s) 769
AlwI GGATC 4 cut(s) 188, 201, 811, 942
AlwNI CAGNNNCTG 2 cut(s) 248, 563
Ama87I CYCGRG 1 cut(s) 1158
Aor13HI TCCGGA 1 cut(s) 304
Aor51HI AGCGCT 1 cut(s) 459
AoxI GGCC 1 cut(s) 327
ApeKI GCWGC 5 cut(s) 5, 30, 215, 248, 563
ApoI RAATTY 2 cut(s) 440, 779
AspLEI GCGC 3 cut(s) 224, 364, 460
AspS9I GGNCC 2 cut(s) 35, 123
AsuHPI GGTGA 1 cut(s) 280
AvaI CYCGRG 1 cut(s) 1158
AvaII GGWCC 2 cut(s) 35, 123
BamHI GGATCC 1 cut(s) 193
BanII GRGCYC 1 cut(s) 189
BauI CACGAG 1 cut(s) 182
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 2 cut(s) 189, 969
BbvCI CCTCAGC 2 cut(s) 504, 714
BbvI GCAGC 5 cut(s) 17, 42, 202, 235, 550
BccI CCATC 5 cut(s) 263, 485, 689, 724, 803
BceAI ACGGC 1 cut(s) 455
BcgI CGANNNNNNTGC 4 cut(s) 194, 228, 1149, 1183
BciT130I CCWGG 4 cut(s) 91, 551, 873, 1026
BciVI GTATCC 1 cut(s) 869
BcoDI GTCTC 1 cut(s) 769
BfaI CTAG 1 cut(s) 488
BfoI RGCGCY 1 cut(s) 461
BfuI GTATCC 1 cut(s) 869
BisI GCNGC 6 cut(s) 6, 31, 216, 249, 564, 905
BlsI GCNGC 6 cut(s) 7, 32, 217, 250, 565, 906
Bme1390I CCNGG 4 cut(s) 91, 551, 873, 1026
Bme18I GGWCC 2 cut(s) 35, 123
BmeT110I CYCGRG 1 cut(s) 1158
BmgT120I GGNCC 2 cut(s) 35, 123
BmiI GGNNCC 2 cut(s) 195, 555
BmrFI CCNGG 4 cut(s) 91, 551, 873, 1026
BmsI GCATC 8 cut(s) 202, 235, 260, 276, 349, 550, 835, 986
BpiI GAAGAC 1 cut(s) 843
BpmI CTGGAG 3 cut(s) 981, 1047, 1150
Bpu10I CCTNAGC 2 cut(s) 504, 714
BpuEI CTTGAG 2 cut(s) 173, 746
Bsa29I ATCGAT 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 1189
BsaJI CCNNGG 2 cut(s) 740, 891
BsaWI WCCGGW 2 cut(s) 132, 304
BsaXI ACNNNNNCTCC 2 cut(s) 1123, 1153
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 641, 872, 1163
Bse1I ACTGG 1 cut(s) 805
Bse3DI GCAATG 1 cut(s) 52
Bse8I GATNNNNATC 1 cut(s) 1189
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 4 cut(s) 91, 551, 873, 1026
BseCI ATCGAT 1 cut(s) 78
BseDI CCNNGG 2 cut(s) 740, 891
BseGI GGATG 4 cut(s) 251, 814, 1190, 1204
BseJI GATNNNNATC 1 cut(s) 1189
BseLI CCNNNNNNNGG 4 cut(s) 132, 641, 872, 1163
BseMI GCAATG 1 cut(s) 52
BseMII CTCAG 3 cut(s) 495, 667, 705
BseNI ACTGG 1 cut(s) 805
BseXI GCAGC 5 cut(s) 17, 42, 202, 235, 550
BsgI GTGCAG 3 cut(s) 327, 549, 1194
Bsh1285I CGRYCG 1 cut(s) 143
BshFI GGCC 1 cut(s) 329
BshVI ATCGAT 1 cut(s) 78
BsiEI CGRYCG 1 cut(s) 143
BsiHKAI GWGCWC 2 cut(s) 189, 969
BsiHKCI CYCGRG 1 cut(s) 1158
BsiSI CCGG 3 cut(s) 133, 305, 635
BslI CCNNNNNNNGG 4 cut(s) 132, 641, 872, 1163
BsmAI GTCTC 1 cut(s) 769
BsmI GAATGC 3 cut(s) 224, 385, 415
BsnI GGCC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 1158
Bsp1286I GDGCHC 2 cut(s) 189, 969
Bsp13I TCCGGA 1 cut(s) 304
Bsp143I GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
Bsp19I CCATGG 1 cut(s) 740
BspACI CCGC 3 cut(s) 33, 139, 904
BspANI GGCC 1 cut(s) 329
BspCNI CTCAG 3 cut(s) 496, 666, 706
BspDI ATCGAT 1 cut(s) 78
BspEI TCCGGA 1 cut(s) 304
BspLI GGNNCC 2 cut(s) 195, 555
BspPI GGATC 4 cut(s) 188, 201, 811, 942
BsrDI GCAATG 1 cut(s) 52
BsrI ACTGG 1 cut(s) 805
BssECI CCNNGG 2 cut(s) 740, 891
BssMI GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 740
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 4 cut(s) 91, 551, 873, 1026
Bst4CI ACNGT 1 cut(s) 895
Bst6I CTCTTC 1 cut(s) 1098
BstC8I GCNNGC 3 cut(s) 220, 420, 594
BstDEI CTNAG 3 cut(s) 504, 653, 714
BstDSI CCRYGG 2 cut(s) 740, 891
BstF5I GGATG 4 cut(s) 251, 814, 1190, 1204
BstH2I RGCGCY 1 cut(s) 461
BstHHI GCGC 3 cut(s) 224, 364, 460
BstKTI GATC 6 cut(s) 78, 196, 201, 806, 937, 1128
BstMAI GTCTC 1 cut(s) 769
BstMBI GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
BstMCI CGRYCG 1 cut(s) 143
BstMWI GCNNNNNNNGC 8 cut(s) 184, 221, 228, 257, 316, 335, 419, 983
BstNI CCWGG 4 cut(s) 91, 551, 873, 1026
BstSCI CCNGG 4 cut(s) 89, 549, 871, 1024
BstV1I GCAGC 5 cut(s) 17, 42, 202, 235, 550
BstV2I GAAGAC 1 cut(s) 843
BstX2I RGATCY 2 cut(s) 193, 934
BstYI RGATCY 2 cut(s) 193, 934
Bsu15I ATCGAT 1 cut(s) 78
BsuI GTATCC 1 cut(s) 869
BsuRI GGCC 1 cut(s) 329
BsuTUI ATCGAT 1 cut(s) 78
BtgI CCRYGG 2 cut(s) 740, 891
BtgZI GCGATG 1 cut(s) 241
BtsCI GGATG 4 cut(s) 251, 814, 1190, 1204
BtsI GCAGTG 2 cut(s) 51, 1177
BtsIMutI CAGTG 2 cut(s) 51, 1177
Cac8I GCNNGC 3 cut(s) 220, 420, 594
CaiI CAGNNNCTG 2 cut(s) 248, 563
CfoI GCGC 3 cut(s) 224, 364, 460
Cfr13I GGNCC 2 cut(s) 35, 123
ClaI ATCGAT 1 cut(s) 78
Csp6I GTAC 1 cut(s) 658
CviAII CATG 1 cut(s) 741
CviQI GTAC 1 cut(s) 658
DdeI CTNAG 3 cut(s) 504, 653, 714
DpnI GATC 6 cut(s) 77, 195, 200, 805, 936, 1127
DpnII GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
DraI TTTAAA 2 cut(s) 627, 676
DraIII CACNNNGTG 1 cut(s) 350
Eam1104I CTCTTC 1 cut(s) 1098
EarI CTCTTC 1 cut(s) 1098
Ecl136II GAGCTC 1 cut(s) 187
Eco130I CCWWGG 1 cut(s) 740
Eco147I AGGCCT 1 cut(s) 329
Eco24I GRGCYC 1 cut(s) 189
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 2 cut(s) 35, 123
Eco47III AGCGCT 1 cut(s) 459
Eco53kI GAGCTC 1 cut(s) 187
Eco57I CTGAAG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 1158
EcoICRI GAGCTC 1 cut(s) 187
EcoO109I RGGNCCY 1 cut(s) 123
EcoRII CCWGG 4 cut(s) 89, 549, 871, 1024
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 1 cut(s) 740
EcoT38I GRGCYC 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 740
FaeI CATG 1 cut(s) 744
FalI AAGNNNNNCTT 2 cut(s) 653, 685
FatI CATG 1 cut(s) 740
FauNDI CATATG 1 cut(s) 499
FblI GTMKAC 1 cut(s) 914
Fnu4HI GCNGC 6 cut(s) 6, 31, 216, 249, 564, 905
FokI GGATG 4 cut(s) 238, 821, 1177, 1191
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 6 cut(s) 6, 31, 216, 249, 564, 905
FspBI CTAG 1 cut(s) 488
GlaI GCGC 3 cut(s) 223, 363, 459
GluI GCNGC 6 cut(s) 6, 31, 216, 249, 564, 905
GsuI CTGGAG 3 cut(s) 981, 1047, 1150
HaeII RGCGCY 1 cut(s) 461
HaeIII GGCC 1 cut(s) 329
HapII CCGG 3 cut(s) 133, 305, 635
HhaI GCGC 3 cut(s) 224, 364, 460
Hin1II CATG 1 cut(s) 744
Hin6I GCGC 3 cut(s) 222, 362, 458
HinP1I GCGC 3 cut(s) 222, 362, 458
HincII GTYRAC 3 cut(s) 373, 898, 915
HindII GTYRAC 3 cut(s) 373, 898, 915
HindIII AAGCTT 3 cut(s) 107, 921, 984
HinfI GANTC 3 cut(s) 611, 651, 1034
HpaI GTTAAC 1 cut(s) 373
HpaII CCGG 3 cut(s) 133, 305, 635
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 5 cut(s) 117, 288, 373, 898, 915
Hpy188I TCNGA 3 cut(s) 198, 808, 982
Hpy188III TCNNGA 9 cut(s) 170, 182, 305, 356, 701, 938, 960, 1097, 1129
Hpy8I GTNNAC 5 cut(s) 117, 288, 373, 898, 915
Hpy99I CGWCG 1 cut(s) 919
HpyAV CCTTC 4 cut(s) 160, 340, 967, 1157
HpyCH4III ACNGT 1 cut(s) 895
HpyCH4IV ACGT 2 cut(s) 165, 1111
HpyF10VI GCNNNNNNNGC 8 cut(s) 184, 221, 228, 257, 316, 335, 419, 983
HpyF3I CTNAG 3 cut(s) 504, 653, 714
HpySE526I ACGT 2 cut(s) 165, 1111
Hsp92II CATG 1 cut(s) 744
HspAI GCGC 3 cut(s) 222, 362, 458
Kpn2I TCCGGA 1 cut(s) 304
KspAI GTTAAC 1 cut(s) 373
Kzo9I GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
LmnI GCTCC 3 cut(s) 307, 553, 1131
Lsp1109I GCAGC 5 cut(s) 17, 42, 202, 235, 550
LweI GCATC 8 cut(s) 202, 235, 260, 276, 349, 550, 835, 986
MaeI CTAG 1 cut(s) 488
MaeII ACGT 2 cut(s) 165, 1111
MaeIII GTNAC 1 cut(s) 796
MalI GATC 6 cut(s) 77, 195, 200, 805, 936, 1127
MboI GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
MboII GAAGA 5 cut(s) 106, 172, 716, 848, 1085
MflI RGATCY 2 cut(s) 193, 934
MhlI GDGCHC 2 cut(s) 189, 969
MlyI GAGTC 2 cut(s) 605, 645
MnlI CCTC 9 cut(s) 34, 129, 136, 189, 499, 607, 709, 1036, 1209
MroI TCCGGA 1 cut(s) 304
MseI TTAA 6 cut(s) 372, 464, 512, 626, 675, 954
MspA1I CMGCKG 1 cut(s) 33
MspI CCGG 3 cut(s) 133, 305, 635
MspR9I CCNGG 4 cut(s) 91, 551, 873, 1026
Mva1269I GAATGC 3 cut(s) 224, 385, 415
MvaI CCWGG 4 cut(s) 91, 551, 873, 1026
MwoI GCNNNNNNNGC 8 cut(s) 184, 221, 228, 257, 316, 335, 419, 983
NcoI CCATGG 1 cut(s) 740
NdeI CATATG 1 cut(s) 499
NdeII GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
NlaIII CATG 1 cut(s) 744
NlaIV GGNNCC 2 cut(s) 195, 555
PceI AGGCCT 1 cut(s) 329
PctI GAATGC 3 cut(s) 224, 385, 415
PfeI GAWTC 1 cut(s) 1034
PfoI TCCNGGA 2 cut(s) 89, 1024
PkrI GCNGC 6 cut(s) 7, 32, 217, 250, 565, 906
PleI GAGTC 2 cut(s) 605, 645
PpsI GAGTC 2 cut(s) 605, 645
PpuMI RGGWCCY 1 cut(s) 123
Psp124BI GAGCTC 1 cut(s) 189
Psp1406I AACGTT 1 cut(s) 165
Psp5II RGGWCCY 1 cut(s) 123
Psp6I CCWGG 4 cut(s) 89, 549, 871, 1024
PspGI CCWGG 4 cut(s) 89, 549, 871, 1024
PspN4I GGNNCC 2 cut(s) 195, 555
PspPI GGNCC 2 cut(s) 35, 123
PspPPI RGGWCCY 1 cut(s) 123
PstNI CAGNNNCTG 2 cut(s) 248, 563
PsuI RGATCY 2 cut(s) 193, 934
RsaI GTAC 1 cut(s) 659
RsaNI GTAC 1 cut(s) 658
SacI GAGCTC 1 cut(s) 189
SalI GTCGAC 1 cut(s) 913
SaqAI TTAA 6 cut(s) 372, 464, 512, 626, 675, 954
SatI GCNGC 6 cut(s) 6, 31, 216, 249, 564, 905
Sau3AI GATC 6 cut(s) 75, 193, 198, 803, 934, 1125
Sau96I GGNCC 2 cut(s) 35, 123
SchI GAGTC 2 cut(s) 605, 645
ScrFI CCNGG 4 cut(s) 91, 551, 873, 1026
SduI GDGCHC 2 cut(s) 189, 969
SfaNI GCATC 8 cut(s) 202, 235, 260, 276, 349, 550, 835, 986
SinI GGWCC 2 cut(s) 35, 123
SmlI CTYRAG 2 cut(s) 188, 725
SmoI CTYRAG 2 cut(s) 188, 725
SseBI AGGCCT 1 cut(s) 329
SsiI CCGC 3 cut(s) 33, 139, 904
SspMI CTAG 1 cut(s) 488
SstI GAGCTC 1 cut(s) 189
StuI AGGCCT 1 cut(s) 329
StyD4I CCNGG 4 cut(s) 89, 549, 871, 1024
StyI CCWWGG 1 cut(s) 740
TaaI ACNGT 1 cut(s) 895
TaiI ACGT 2 cut(s) 168, 1114
TaqI TCGA 4 cut(s) 78, 128, 204, 914
TauI GCSGC 1 cut(s) 907
TfiI GAWTC 1 cut(s) 1034
Tru1I TTAA 6 cut(s) 372, 464, 512, 626, 675, 954
Tru9I TTAA 6 cut(s) 372, 464, 512, 626, 675, 954
TscAI CASTG 2 cut(s) 51, 1177
TseI GCWGC 5 cut(s) 5, 30, 215, 248, 563
TspDTI ATGAA 4 cut(s) 414, 915, 1047, 1194
TspGWI ACGGA 1 cut(s) 145
TspRI CASTG 2 cut(s) 51, 1177
VpaK11BI GGWCC 2 cut(s) 35, 123
XapI RAATTY 2 cut(s) 440, 779
XcmI CCANNNNNNNNNTGG 1 cut(s) 45
XmiI GTMKAC 1 cut(s) 914
XspI CTAG 1 cut(s) 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.