RchiOBHm_Chr6g0248361

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
4389097 .. 4389351
255 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 255 bp
ATGACAAAGTTTTGGCCAATGAAGACCATTGGACCAACTATACCATCTCAATGCTTGGAAAAGCGTCTTGAAGATGATAAAGACTATGGTTTCAACTTGTTTAAACCAAAGAGTGATGCCTGCATGAAATGGCTCAATGAACAGCCAAAGGGGTCTATTGTTTATGTGTCATTTGGCAGCCCAACAGAAATTGAAGCTGAGCAAATGGAGGAACTGGCTTTCAGATCGAGGAGTAGTAAAGGGAAATTCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

9.7

Weight (kDa)

7.72

Isoelectric Point (pI)

62.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248361
rosa_multiflora Rmu_sc0020269.1_g000001
rosa_samantha Rh6BG042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 14
AcsI RAATTY 1 cut(s) 245
AgsI TTSAA 3 cut(s) 71, 94, 194
AluBI AGCT 1 cut(s) 197
AluI AGCT 1 cut(s) 197
AoxI GGCC 1 cut(s) 14
ApeKI GCWGC 1 cut(s) 177
ApoI RAATTY 1 cut(s) 245
AspS9I GGNCC 1 cut(s) 32
AvaII GGWCC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 16
BbsI GAAGAC 1 cut(s) 29
BbvI GCAGC 1 cut(s) 189
BccI CCATC 1 cut(s) 52
BisI GCNGC 1 cut(s) 178
BlpI GCTNAGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 179
Bme18I GGWCC 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 32
BmsI GCATC 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 29
Bpu1102I GCTNAGC 1 cut(s) 198
Bse1I ACTGG 1 cut(s) 219
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 1 cut(s) 219
BseRI GAGGAG 1 cut(s) 244
BseXI GCAGC 1 cut(s) 189
BshFI GGCC 1 cut(s) 16
BsnI GGCC 1 cut(s) 16
Bsp143I GATC 1 cut(s) 224
Bsp1720I GCTNAGC 1 cut(s) 198
BspANI GGCC 1 cut(s) 16
BspCNI CTCAG 1 cut(s) 190
BsrI ACTGG 1 cut(s) 219
BssMI GATC 1 cut(s) 224
BstC8I GCNNGC 1 cut(s) 121
BstDEI CTNAG 1 cut(s) 198
BstKTI GATC 1 cut(s) 227
BstMBI GATC 1 cut(s) 224
BstV1I GCAGC 1 cut(s) 189
BstV2I GAAGAC 1 cut(s) 29
BsuRI GGCC 1 cut(s) 16
Cac8I GCNNGC 1 cut(s) 121
Cfr13I GGNCC 1 cut(s) 32
CseI GACGC 1 cut(s) 53
CviAII CATG 1 cut(s) 124
CviJI RGCY 6 cut(s) 16, 133, 145, 180, 197, 218
CviKI_1 RGCY 6 cut(s) 16, 133, 145, 180, 197, 218
DdeI CTNAG 1 cut(s) 198
DpnI GATC 1 cut(s) 226
DpnII GATC 1 cut(s) 224
DraI TTTAAA 1 cut(s) 103
EaeI YGGCCR 1 cut(s) 14
Eco47I GGWCC 1 cut(s) 32
FaeI CATG 1 cut(s) 127
FaiI YATR 4 cut(s) 41, 87, 125, 165
FatI CATG 1 cut(s) 123
Fnu4HI GCNGC 1 cut(s) 178
Fsp4HI GCNGC 1 cut(s) 178
GluI GCNGC 1 cut(s) 178
HaeIII GGCC 1 cut(s) 16
HgaI GACGC 1 cut(s) 53
Hin1II CATG 1 cut(s) 127
Hpy188I TCNGA 1 cut(s) 224
Hpy188III TCNNGA 1 cut(s) 68
HpyCH4V TGCA 1 cut(s) 123
HpyF3I CTNAG 1 cut(s) 198
Hsp92II CATG 1 cut(s) 127
Kzo9I GATC 1 cut(s) 224
LpnPI CCDG 2 cut(s) 133, 200
Lsp1109I GCAGC 1 cut(s) 189
LweI GCATC 1 cut(s) 106
MalI GATC 1 cut(s) 226
MboI GATC 1 cut(s) 224
MboII GAAGA 2 cut(s) 34, 83
MlsI TGGCCA 1 cut(s) 16
MluCI AATT 2 cut(s) 189, 245
MluNI TGGCCA 1 cut(s) 16
MnlI CCTC 2 cut(s) 202, 222
Mox20I TGGCCA 1 cut(s) 16
MscI TGGCCA 1 cut(s) 16
MseI TTAA 1 cut(s) 102
MslI CAYNNNNRTG 1 cut(s) 49
Msp20I TGGCCA 1 cut(s) 16
MssI GTTTAAAC 1 cut(s) 103
NdeII GATC 1 cut(s) 224
NlaIII CATG 1 cut(s) 127
PkrI GCNGC 1 cut(s) 179
PmeI GTTTAAAC 1 cut(s) 103
PspPI GGNCC 1 cut(s) 32
RseI CAYNNNNRTG 1 cut(s) 49
SaqAI TTAA 1 cut(s) 102
SatI GCNGC 1 cut(s) 178
Sau3AI GATC 1 cut(s) 224
Sau96I GGNCC 1 cut(s) 32
SetI ASST 1 cut(s) 199
SfaNI GCATC 1 cut(s) 106
SgeI CNNG 7 cut(s) 67, 80, 109, 132, 136, 227, 240
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 49
Sse9I AATT 2 cut(s) 189, 245
TaqI TCGA 1 cut(s) 227
TasI AATT 2 cut(s) 189, 245
Tru1I TTAA 1 cut(s) 102
Tru9I TTAA 1 cut(s) 102
TseI GCWGC 1 cut(s) 177
TspDTI ATGAA 3 cut(s) 35, 140, 153
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.