Rh6BG042900

UDP-glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
6913116 .. 6913576
461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG042900.1

Sequence Viewer

Length: 315 bp
ATGGGAAATGAAGAAAACAAAACCAAAGACAGACCCAAAGAGCCTAAAGCGGTGGATTGGATGACAAAGTTTTGGCCAATGAAGACCATTGGACCAACTATACCATCTCAATGCTTGGAAAAGCGTCTTGAAGATGATAAAGACTATGGTTTCAACTTGTTTAAACCAAAGAGTGATGCCTGCATGAAATGGCTCAATGAACAGCCAAAGGGGTCTATTGTTTATGTGTCATTTGGCAGCCCAACAGAAATTGAAGCTGAGCAAATGGAGGAACTGGCTTTCAGATCGAGGAGTAGTAAAGGGAAATTCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

12.05

Weight (kDa)

7.7

Isoelectric Point (pI)

60.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0025075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248361
rosa_multiflora Rmu_sc0020269.1_g000001
rosa_samantha Rh6BG042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 74
AcsI RAATTY 1 cut(s) 305
AgsI TTSAA 3 cut(s) 131, 154, 254
AluBI AGCT 1 cut(s) 257
AluI AGCT 1 cut(s) 257
AoxI GGCC 1 cut(s) 74
ApeKI GCWGC 1 cut(s) 237
ApoI RAATTY 1 cut(s) 305
AspS9I GGNCC 1 cut(s) 92
AvaII GGWCC 1 cut(s) 92
BalI TGGCCA 1 cut(s) 76
BbsI GAAGAC 1 cut(s) 89
BbvI GCAGC 1 cut(s) 249
BccI CCATC 1 cut(s) 112
BisI GCNGC 1 cut(s) 238
BlpI GCTNAGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 239
Bme18I GGWCC 1 cut(s) 92
BmgT120I GGNCC 1 cut(s) 92
BmsI GCATC 1 cut(s) 166
BpiI GAAGAC 1 cut(s) 89
Bpu1102I GCTNAGC 1 cut(s) 258
Bse1I ACTGG 1 cut(s) 279
BseGI GGATG 1 cut(s) 66
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 1 cut(s) 279
BseRI GAGGAG 1 cut(s) 304
BseXI GCAGC 1 cut(s) 249
BshFI GGCC 1 cut(s) 76
BsnI GGCC 1 cut(s) 76
Bsp143I GATC 1 cut(s) 284
Bsp1720I GCTNAGC 1 cut(s) 258
BspACI CCGC 1 cut(s) 50
BspANI GGCC 1 cut(s) 76
BspCNI CTCAG 1 cut(s) 250
BsrI ACTGG 1 cut(s) 279
BssMI GATC 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 181
BstDEI CTNAG 1 cut(s) 258
BstF5I GGATG 1 cut(s) 66
BstKTI GATC 1 cut(s) 287
BstMBI GATC 1 cut(s) 284
BstV1I GCAGC 1 cut(s) 249
BstV2I GAAGAC 1 cut(s) 89
BsuRI GGCC 1 cut(s) 76
BtsCI GGATG 1 cut(s) 66
Cac8I GCNNGC 1 cut(s) 181
Cfr13I GGNCC 1 cut(s) 92
CseI GACGC 1 cut(s) 113
CviAII CATG 1 cut(s) 184
CviJI RGCY 7 cut(s) 43, 76, 193, 205, 240, 257, 278
CviKI_1 RGCY 7 cut(s) 43, 76, 193, 205, 240, 257, 278
DdeI CTNAG 1 cut(s) 258
DpnI GATC 1 cut(s) 286
DpnII GATC 1 cut(s) 284
DraI TTTAAA 1 cut(s) 163
EaeI YGGCCR 1 cut(s) 74
Eco47I GGWCC 1 cut(s) 92
FaeI CATG 1 cut(s) 187
FaiI YATR 4 cut(s) 101, 147, 185, 225
FatI CATG 1 cut(s) 183
Fnu4HI GCNGC 1 cut(s) 238
FokI GGATG 1 cut(s) 73
Fsp4HI GCNGC 1 cut(s) 238
GluI GCNGC 1 cut(s) 238
HaeIII GGCC 1 cut(s) 76
HgaI GACGC 1 cut(s) 113
Hin1II CATG 1 cut(s) 187
Hpy188I TCNGA 1 cut(s) 284
Hpy188III TCNNGA 1 cut(s) 128
HpyCH4V TGCA 1 cut(s) 183
HpyF3I CTNAG 1 cut(s) 258
Hsp92II CATG 1 cut(s) 187
Kzo9I GATC 1 cut(s) 284
LpnPI CCDG 2 cut(s) 193, 260
Lsp1109I GCAGC 1 cut(s) 249
LweI GCATC 1 cut(s) 166
MalI GATC 1 cut(s) 286
MboI GATC 1 cut(s) 284
MboII GAAGA 3 cut(s) 23, 94, 143
MlsI TGGCCA 1 cut(s) 76
MluCI AATT 2 cut(s) 249, 305
MluNI TGGCCA 1 cut(s) 76
MnlI CCTC 2 cut(s) 262, 282
Mox20I TGGCCA 1 cut(s) 76
MscI TGGCCA 1 cut(s) 76
MseI TTAA 1 cut(s) 162
MslI CAYNNNNRTG 1 cut(s) 109
Msp20I TGGCCA 1 cut(s) 76
MssI GTTTAAAC 1 cut(s) 163
NdeII GATC 1 cut(s) 284
NlaIII CATG 1 cut(s) 187
PkrI GCNGC 1 cut(s) 239
PmeI GTTTAAAC 1 cut(s) 163
PspPI GGNCC 1 cut(s) 92
RseI CAYNNNNRTG 1 cut(s) 109
SaqAI TTAA 1 cut(s) 162
SatI GCNGC 1 cut(s) 238
Sau3AI GATC 1 cut(s) 284
Sau96I GGNCC 1 cut(s) 92
SetI ASST 1 cut(s) 259
SfaNI GCATC 1 cut(s) 166
SgeI CNNG 7 cut(s) 127, 140, 169, 192, 196, 287, 300
SinI GGWCC 1 cut(s) 92
SmiMI CAYNNNNRTG 1 cut(s) 109
Sse9I AATT 2 cut(s) 249, 305
SsiI CCGC 1 cut(s) 50
TaqI TCGA 1 cut(s) 287
TasI AATT 2 cut(s) 249, 305
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TseI GCWGC 1 cut(s) 237
TspDTI ATGAA 4 cut(s) 24, 95, 200, 213
VpaK11BI GGWCC 1 cut(s) 92
XapI RAATTY 1 cut(s) 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.