Rmu_sc0020269.1_g000001

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020269.1
Physical Location & Seq
Reverse (-)
2 .. 169
168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020269.1_g000001.1.cds

Sequence Viewer

Length: 168 bp
atgataggaccaacaattccatcagttttcttggacaagcggttggaggatgacaaagactatggtcttagccttttcaagccaaatatggagacttgcatgcaatggctggactccaggaaacctggctcagtcgtctatgcatcatttggaagcttggccaaccta
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

56

Amino Acids

6.28

Weight (kDa)

4.98

Isoelectric Point (pI)

28.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0025075)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr6g0248361
rosa_multiflora Rmu_sc0020269.1_g000001
rosa_samantha Rh6BG042900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 40
AcoI YGGCCR 1 cut(s) 159
AgsI TTSAA 1 cut(s) 79
AjnI CCWGG 2 cut(s) 116, 124
AluBI AGCT 1 cut(s) 156
AluI AGCT 1 cut(s) 156
Alw26I GTCTC 1 cut(s) 86
AoxI GGCC 1 cut(s) 159
AspS9I GGNCC 1 cut(s) 8
AvaII GGWCC 1 cut(s) 8
BalI TGGCCA 1 cut(s) 161
BccI CCATC 1 cut(s) 28
BciT130I CCWGG 2 cut(s) 118, 126
BcoDI GTCTC 1 cut(s) 86
Bme1390I CCNGG 2 cut(s) 118, 126
Bme18I GGWCC 1 cut(s) 8
BmgT120I GGNCC 1 cut(s) 8
BmrFI CCNGG 2 cut(s) 118, 126
BmsI GCATC 1 cut(s) 152
BoxI GACNNNNGTC 1 cut(s) 63
BpmI CTGGAG 1 cut(s) 100
Bse3DI GCAATG 1 cut(s) 110
BseBI CCWGG 2 cut(s) 118, 126
BseGI GGATG 1 cut(s) 55
BseMI GCAATG 1 cut(s) 110
BseMII CTCAG 1 cut(s) 144
BshFI GGCC 1 cut(s) 161
BsmAI GTCTC 1 cut(s) 86
BsnI GGCC 1 cut(s) 161
BspACI CCGC 1 cut(s) 40
BspANI GGCC 1 cut(s) 161
BspCNI CTCAG 1 cut(s) 143
BsrDI GCAATG 1 cut(s) 110
Bst2UI CCWGG 2 cut(s) 118, 126
BstC8I GCNNGC 1 cut(s) 101
BstDEI CTNAG 2 cut(s) 68, 130
BstF5I GGATG 1 cut(s) 55
BstMAI GTCTC 1 cut(s) 86
BstNI CCWGG 2 cut(s) 118, 126
BstNSI RCATGY 1 cut(s) 103
BstPAI GACNNNNGTC 1 cut(s) 63
BstSCI CCNGG 2 cut(s) 116, 124
BsuRI GGCC 1 cut(s) 161
BtsCI GGATG 1 cut(s) 55
Cac8I GCNNGC 1 cut(s) 101
Cfr13I GGNCC 1 cut(s) 8
CviAII CATG 1 cut(s) 100
CviJI RGCY 6 cut(s) 72, 82, 109, 129, 156, 161
CviKI_1 RGCY 6 cut(s) 72, 82, 109, 129, 156, 161
DdeI CTNAG 2 cut(s) 68, 130
EaeI YGGCCR 1 cut(s) 159
Eco47I GGWCC 1 cut(s) 8
EcoRII CCWGG 2 cut(s) 116, 124
EcoT22I ATGCAT 1 cut(s) 145
FaeI CATG 1 cut(s) 103
FaiI YATR 4 cut(s) 63, 89, 101, 141
FatI CATG 1 cut(s) 99
FokI GGATG 1 cut(s) 62
GsuI CTGGAG 1 cut(s) 100
HaeIII GGCC 1 cut(s) 161
Hin1II CATG 1 cut(s) 103
HindIII AAGCTT 1 cut(s) 154
HinfI GANTC 1 cut(s) 113
HpyCH4V TGCA 3 cut(s) 99, 103, 143
HpyF3I CTNAG 2 cut(s) 68, 130
Hsp92II CATG 1 cut(s) 103
LpnPI CCDG 5 cut(s) 95, 103, 111, 130, 138
LweI GCATC 1 cut(s) 152
MlsI TGGCCA 1 cut(s) 161
MluCI AATT 1 cut(s) 15
MluNI TGGCCA 1 cut(s) 161
MlyI GAGTC 1 cut(s) 107
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 1 cut(s) 40
Mox20I TGGCCA 1 cut(s) 161
Mph1103I ATGCAT 1 cut(s) 145
MscI TGGCCA 1 cut(s) 161
Msp20I TGGCCA 1 cut(s) 161
MspR9I CCNGG 2 cut(s) 118, 126
MvaI CCWGG 2 cut(s) 118, 126
NlaIII CATG 1 cut(s) 103
NsiI ATGCAT 1 cut(s) 145
NspI RCATGY 1 cut(s) 103
PaeI GCATGC 1 cut(s) 103
PfoI TCCNGGA 1 cut(s) 116
PleI GAGTC 1 cut(s) 107
PpsI GAGTC 1 cut(s) 107
PshAI GACNNNNGTC 1 cut(s) 63
Psp6I CCWGG 2 cut(s) 116, 124
PspGI CCWGG 2 cut(s) 116, 124
PspPI GGNCC 1 cut(s) 8
Sau96I GGNCC 1 cut(s) 8
SchI GAGTC 1 cut(s) 107
ScrFI CCNGG 2 cut(s) 118, 126
SetI ASST 3 cut(s) 127, 158, 168
SfaNI GCATC 1 cut(s) 152
SinI GGWCC 1 cut(s) 8
SphI GCATGC 1 cut(s) 103
Sse9I AATT 1 cut(s) 15
SsiI CCGC 1 cut(s) 40
StyD4I CCNGG 2 cut(s) 116, 124
TasI AATT 1 cut(s) 15
VpaK11BI GGWCC 1 cut(s) 8
XceI RCATGY 1 cut(s) 103
Zsp2I ATGCAT 1 cut(s) 145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.