Basic Information
Type: gene
Physical Location & Seq
Reverse (-)
62101343 .. 62102561
N/A
Length: 240 bp
ATGGTCCTTGGGGAGGGAGTGGTGGTTTTGTGTTTGATGATGGAGTTTATTCAGATAATTTTTGATTATCCGTATGAAATCTTGACTCACATCACAGGAACATATGGTCCTGCAATGGGGATGGGGCCTAATGTGATCAAATCATTGACCATCCACACGACGAAGAAGAAGCATGGGCCATATGGAGAAGAACAAGGAACCCGATTCAGCACTCAAGCTTGGAGAAGGAAAAATTGTTGA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
8.66
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| Jacalin |
PF01419 |
19 - 72 |
1.4e-12 |
Jacalin-like lectin domain |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0025056)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AfiI |
CCNNNNNNNGG |
2 cut(s)
|
13, 116 |
| AloI |
GAACNNNNNNTCC |
2 cut(s)
|
91, 123 |
| AluBI |
AGCT |
1 cut(s)
|
218 |
| AluI |
AGCT |
1 cut(s)
|
218 |
| AoxI |
GGCC |
2 cut(s)
|
125, 176 |
| AspS9I |
GGNCC |
4 cut(s)
|
4, 107, 125, 176 |
| AvaII |
GGWCC |
2 cut(s)
|
4, 107 |
| BccI |
CCATC |
3 cut(s)
|
34, 115, 158 |
| BclI |
TGATCA |
1 cut(s)
|
135 |
| Bme18I |
GGWCC |
2 cut(s)
|
4, 107 |
| BmgT120I |
GGNCC |
4 cut(s)
|
4, 107, 125, 176 |
| BmiI |
GGNNCC |
2 cut(s)
|
126, 199 |
| BpuEI |
CTTGAG |
1 cut(s)
|
198 |
| BsaJI |
CCNNGG |
1 cut(s)
|
7 |
| BsaXI |
ACNNNNNCTCC |
2 cut(s)
|
9, 39 |
| Bsc4I |
CCNNNNNNNGG |
2 cut(s)
|
13, 116 |
| Bse3DI |
GCAATG |
1 cut(s)
|
120 |
| BseDI |
CCNNGG |
1 cut(s)
|
7 |
| BseGI |
GGATG |
2 cut(s)
|
126, 150 |
| BseLI |
CCNNNNNNNGG |
2 cut(s)
|
13, 116 |
| BseMI |
GCAATG |
1 cut(s)
|
120 |
| BshFI |
GGCC |
2 cut(s)
|
127, 178 |
| BslI |
CCNNNNNNNGG |
2 cut(s)
|
13, 116 |
| BsnI |
GGCC |
2 cut(s)
|
127, 178 |
| Bsp143I |
GATC |
1 cut(s)
|
135 |
| BspANI |
GGCC |
2 cut(s)
|
127, 178 |
| BspLI |
GGNNCC |
2 cut(s)
|
126, 199 |
| BsrDI |
GCAATG |
1 cut(s)
|
120 |
| BssECI |
CCNNGG |
1 cut(s)
|
7 |
| BssMI |
GATC |
1 cut(s)
|
135 |
| BssT1I |
CCWWGG |
1 cut(s)
|
7 |
| BstENI |
CCTNNNNNAGG |
1 cut(s)
|
11 |
| BstF5I |
GGATG |
2 cut(s)
|
126, 150 |
| BstKTI |
GATC |
1 cut(s)
|
138 |
| BstMBI |
GATC |
1 cut(s)
|
135 |
| BsuRI |
GGCC |
2 cut(s)
|
127, 178 |
| BtsCI |
GGATG |
2 cut(s)
|
126, 150 |
| Cfr13I |
GGNCC |
4 cut(s)
|
4, 107, 125, 176 |
| CviAII |
CATG |
1 cut(s)
|
173 |
| CviJI |
RGCY |
3 cut(s)
|
127, 178, 218 |
| CviKI_1 |
RGCY |
3 cut(s)
|
127, 178, 218 |
| DpnI |
GATC |
1 cut(s)
|
137 |
| DpnII |
GATC |
1 cut(s)
|
135 |
| Eco130I |
CCWWGG |
1 cut(s)
|
7 |
| Eco47I |
GGWCC |
2 cut(s)
|
4, 107 |
| EcoNI |
CCTNNNNNAGG |
1 cut(s)
|
11 |
| EcoO109I |
RGGNCCY |
1 cut(s)
|
125 |
| EcoT14I |
CCWWGG |
1 cut(s)
|
7 |
| ErhI |
CCWWGG |
1 cut(s)
|
7 |
| FaeI |
CATG |
1 cut(s)
|
176 |
| FaiI |
YATR |
6 cut(s)
|
75, 103, 105, 174, 181, 183 |
| FatI |
CATG |
1 cut(s)
|
172 |
| FauNDI |
CATATG |
2 cut(s)
|
103, 181 |
| FbaI |
TGATCA |
1 cut(s)
|
135 |
| FokI |
GGATG |
2 cut(s)
|
133, 137 |
| HaeIII |
GGCC |
2 cut(s)
|
127, 178 |
| Hin1II |
CATG |
1 cut(s)
|
176 |
| HindIII |
AAGCTT |
1 cut(s)
|
216 |
| HinfI |
GANTC |
2 cut(s)
|
85, 204 |
| Hpy188I |
TCNGA |
1 cut(s)
|
54 |
| Hpy188III |
TCNNGA |
1 cut(s)
|
82 |
| Hpy99I |
CGWCG |
1 cut(s)
|
163 |
| HpyAV |
CCTTC |
1 cut(s)
|
219 |
| HpyCH4V |
TGCA |
1 cut(s)
|
113 |
| Hsp92II |
CATG |
1 cut(s)
|
176 |
| Ksp22I |
TGATCA |
1 cut(s)
|
135 |
| Kzo9I |
GATC |
1 cut(s)
|
135 |
| LpnPI |
CCDG |
2 cut(s)
|
81, 123 |
| MalI |
GATC |
1 cut(s)
|
137 |
| MboI |
GATC |
1 cut(s)
|
135 |
| MboII |
GAAGA |
3 cut(s)
|
175, 178, 200 |
| MluCI |
AATT |
2 cut(s)
|
57, 232 |
| MlyI |
GAGTC |
1 cut(s)
|
79 |
| MnlI |
CCTC |
1 cut(s)
|
7 |
| NdeI |
CATATG |
2 cut(s)
|
103, 181 |
| NdeII |
GATC |
1 cut(s)
|
135 |
| NlaIII |
CATG |
1 cut(s)
|
176 |
| NlaIV |
GGNNCC |
2 cut(s)
|
126, 199 |
| PfeI |
GAWTC |
1 cut(s)
|
204 |
| PleI |
GAGTC |
1 cut(s)
|
79 |
| PpsI |
GAGTC |
1 cut(s)
|
79 |
| PspN4I |
GGNNCC |
2 cut(s)
|
126, 199 |
| PspPI |
GGNCC |
4 cut(s)
|
4, 107, 125, 176 |
| Sau3AI |
GATC |
1 cut(s)
|
135 |
| Sau96I |
GGNCC |
4 cut(s)
|
4, 107, 125, 176 |
| SchI |
GAGTC |
1 cut(s)
|
79 |
| SetI |
ASST |
1 cut(s)
|
220 |
| SinI |
GGWCC |
2 cut(s)
|
4, 107 |
| SmlI |
CTYRAG |
1 cut(s)
|
213 |
| SmoI |
CTYRAG |
1 cut(s)
|
213 |
| Sse9I |
AATT |
2 cut(s)
|
57, 232 |
| StyI |
CCWWGG |
1 cut(s)
|
7 |
| TasI |
AATT |
2 cut(s)
|
57, 232 |
| TfiI |
GAWTC |
1 cut(s)
|
204 |
| TspDTI |
ATGAA |
1 cut(s)
|
90 |
| TspGWI |
ACGGA |
1 cut(s)
|
60 |
| VpaK11BI |
GGWCC |
2 cut(s)
|
4, 107 |
| XagI |
CCTNNNNNAGG |
1 cut(s)
|
11 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.