Peroxiredoxin-2F
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0395851 |
| rosa_samantha | Rh5CG350100 Rh7BG259600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| AccBSI | CCGCTC | 1 cut(s) | 201 |
| AciI | CCGC | 1 cut(s) | 199 |
| AcyI | GRCGYC | 1 cut(s) | 38 |
| AgsI | TTSAA | 2 cut(s) | 69, 82 |
| AluBI | AGCT | 3 cut(s) | 19, 144, 156 |
| AluI | AGCT | 3 cut(s) | 19, 144, 156 |
| Alw26I | GTCTC | 1 cut(s) | 45 |
| AoxI | GGCC | 1 cut(s) | 106 |
| AspS9I | GGNCC | 1 cut(s) | 194 |
| AvaII | GGWCC | 1 cut(s) | 194 |
| BceAI | ACGGC | 1 cut(s) | 51 |
| BcoDI | GTCTC | 1 cut(s) | 45 |
| BglII | AGATCT | 1 cut(s) | 172 |
| Bme18I | GGWCC | 1 cut(s) | 194 |
| BmgT120I | GGNCC | 1 cut(s) | 194 |
| BmiI | GGNNCC | 1 cut(s) | 196 |
| BsaBI | GATNNNNATC | 1 cut(s) | 171 |
| BsaHI | GRCGYC | 1 cut(s) | 38 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 25, 55 |
| Bse8I | GATNNNNATC | 1 cut(s) | 171 |
| BseJI | GATNNNNATC | 1 cut(s) | 171 |
| BseMII | CTCAG | 1 cut(s) | 34 |
| BseRI | GAGGAG | 1 cut(s) | 33 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BslFI | GGGAC | 2 cut(s) | 43, 143 |
| BsmAI | GTCTC | 1 cut(s) | 45 |
| BsmBI | CGTCTC | 1 cut(s) | 45 |
| BsmFI | GGGAC | 2 cut(s) | 43, 143 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspACI | CCGC | 1 cut(s) | 199 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 1 cut(s) | 33 |
| BspLI | GGNNCC | 1 cut(s) | 196 |
| BsrBI | CCGCTC | 1 cut(s) | 201 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssNI | GRCGYC | 1 cut(s) | 38 |
| BstACI | GRCGYC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 2 cut(s) | 20, 204 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMAI | GTCTC | 1 cut(s) | 45 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 194 |
| CseI | GACGC | 1 cut(s) | 27 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 4 cut(s) | 19, 108, 144, 156 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 108, 144, 156 |
| DdeI | CTNAG | 2 cut(s) | 20, 204 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| Eco47I | GGWCC | 1 cut(s) | 194 |
| Esp3I | CGTCTC | 1 cut(s) | 45 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 2 cut(s) | 126, 138 |
| FaqI | GGGAC | 2 cut(s) | 43, 143 |
| FatI | CATG | 1 cut(s) | 136 |
| FauI | CCCGC | 1 cut(s) | 206 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| HgaI | GACGC | 1 cut(s) | 27 |
| Hin1I | GRCGYC | 1 cut(s) | 38 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HindIII | AAGCTT | 1 cut(s) | 154 |
| Hpy188I | TCNGA | 2 cut(s) | 23, 207 |
| Hpy188III | TCNNGA | 1 cut(s) | 12 |
| HpyF3I | CTNAG | 2 cut(s) | 20, 204 |
| Hsp92I | GRCGYC | 1 cut(s) | 38 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LmnI | GCTCC | 1 cut(s) | 141 |
| LpnPI | CCDG | 1 cut(s) | 25 |
| MalI | GATC | 1 cut(s) | 174 |
| MbiI | CCGCTC | 1 cut(s) | 201 |
| MboI | GATC | 1 cut(s) | 172 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MmeI | TCCRAC | 1 cut(s) | 144 |
| MnlI | CCTC | 4 cut(s) | 19, 54, 119, 201 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 140 |
| NlaIV | GGNNCC | 1 cut(s) | 196 |
| PspN4I | GGNNCC | 1 cut(s) | 196 |
| PspPI | GGNCC | 1 cut(s) | 194 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| Sau96I | GGNCC | 1 cut(s) | 194 |
| SetI | ASST | 4 cut(s) | 21, 146, 158, 212 |
| SgeI | CNNG | 7 cut(s) | 24, 60, 94, 100, 149, 169, 203 |
| SinI | GGWCC | 1 cut(s) | 194 |
| SsiI | CCGC | 1 cut(s) | 199 |
| TspDTI | ATGAA | 1 cut(s) | 125 |
| VpaK11BI | GGWCC | 1 cut(s) | 194 |