Peroxiredoxin-2F
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0395851 |
| rosa_samantha | Rh5CG350100 Rh7BG259600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| AciI | CCGC | 1 cut(s) | 35 |
| AcyI | GRCGYC | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AluBI | AGCT | 4 cut(s) | 19, 26, 144, 156 |
| AluI | AGCT | 4 cut(s) | 19, 26, 144, 156 |
| Alw26I | GTCTC | 2 cut(s) | 45, 286 |
| AoxI | GGCC | 1 cut(s) | 106 |
| AspS9I | GGNCC | 1 cut(s) | 194 |
| AvaII | GGWCC | 1 cut(s) | 194 |
| BccI | CCATC | 3 cut(s) | 204, 274, 281 |
| BcoDI | GTCTC | 2 cut(s) | 45, 286 |
| BfaI | CTAG | 1 cut(s) | 313 |
| BglII | AGATCT | 2 cut(s) | 172, 309 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| Bme18I | GGWCC | 1 cut(s) | 194 |
| BmgT120I | GGNCC | 1 cut(s) | 194 |
| BsaHI | GRCGYC | 1 cut(s) | 38 |
| BsaI | GGTCTC | 1 cut(s) | 286 |
| BseMII | CTCAG | 1 cut(s) | 218 |
| BseRI | GAGGAG | 2 cut(s) | 33, 53 |
| BseYI | CCCAGC | 1 cut(s) | 26 |
| BshFI | GGCC | 1 cut(s) | 108 |
| BslFI | GGGAC | 2 cut(s) | 43, 143 |
| BsmAI | GTCTC | 2 cut(s) | 45, 286 |
| BsmBI | CGTCTC | 1 cut(s) | 45 |
| BsmFI | GGGAC | 2 cut(s) | 43, 143 |
| BsnI | GGCC | 1 cut(s) | 108 |
| Bso31I | GGTCTC | 1 cut(s) | 286 |
| Bsp143I | GATC | 2 cut(s) | 172, 309 |
| BspACI | CCGC | 1 cut(s) | 35 |
| BspANI | GGCC | 1 cut(s) | 108 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspTNI | GGTCTC | 1 cut(s) | 286 |
| BssMI | GATC | 2 cut(s) | 172, 309 |
| BssNI | GRCGYC | 1 cut(s) | 38 |
| BstACI | GRCGYC | 1 cut(s) | 38 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstKTI | GATC | 2 cut(s) | 175, 312 |
| BstMAI | GTCTC | 2 cut(s) | 45, 286 |
| BstMBI | GATC | 2 cut(s) | 172, 309 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 32, 269 |
| BstX2I | RGATCY | 2 cut(s) | 172, 309 |
| BstYI | RGATCY | 2 cut(s) | 172, 309 |
| BsuRI | GGCC | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 1 cut(s) | 194 |
| CseI | GACGC | 1 cut(s) | 27 |
| CviAII | CATG | 1 cut(s) | 137 |
| CviJI | RGCY | 7 cut(s) | 19, 26, 108, 144, 156, 263, 272 |
| CviKI_1 | RGCY | 7 cut(s) | 19, 26, 108, 144, 156, 263, 272 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DpnI | GATC | 2 cut(s) | 174, 311 |
| DpnII | GATC | 2 cut(s) | 172, 309 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 37, 92 |
| Eco31I | GGTCTC | 1 cut(s) | 286 |
| Eco47I | GGWCC | 1 cut(s) | 194 |
| Esp3I | CGTCTC | 1 cut(s) | 45 |
| FaeI | CATG | 1 cut(s) | 140 |
| FaiI | YATR | 3 cut(s) | 138, 220, 222 |
| FaqI | GGGAC | 2 cut(s) | 43, 143 |
| FatI | CATG | 1 cut(s) | 136 |
| FauNDI | CATATG | 1 cut(s) | 220 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| FspBI | CTAG | 1 cut(s) | 313 |
| GluI | GCNGC | 1 cut(s) | 36 |
| GsaI | CCCAGC | 1 cut(s) | 30 |
| HaeIII | GGCC | 1 cut(s) | 108 |
| HgaI | GACGC | 1 cut(s) | 27 |
| Hin1I | GRCGYC | 1 cut(s) | 38 |
| Hin1II | CATG | 1 cut(s) | 140 |
| HincII | GTYRAC | 1 cut(s) | 229 |
| HindII | GTYRAC | 1 cut(s) | 229 |
| HindIII | AAGCTT | 1 cut(s) | 154 |
| Hpy166II | GTNNAC | 1 cut(s) | 229 |
| Hpy188I | TCNGA | 2 cut(s) | 23, 207 |
| Hpy188III | TCNNGA | 1 cut(s) | 12 |
| Hpy8I | GTNNAC | 1 cut(s) | 229 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 32, 269 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Hsp92I | GRCGYC | 1 cut(s) | 38 |
| Hsp92II | CATG | 1 cut(s) | 140 |
| Kzo9I | GATC | 2 cut(s) | 172, 309 |
| LmnI | GCTCC | 2 cut(s) | 23, 141 |
| LpnPI | CCDG | 3 cut(s) | 12, 25, 270 |
| MaeI | CTAG | 1 cut(s) | 313 |
| MalI | GATC | 2 cut(s) | 174, 311 |
| MboI | GATC | 2 cut(s) | 172, 309 |
| MflI | RGATCY | 2 cut(s) | 172, 309 |
| MnlI | CCTC | 6 cut(s) | 19, 54, 74, 119, 207, 250 |
| MseI | TTAA | 1 cut(s) | 240 |
| MspA1I | CMGCKG | 1 cut(s) | 35 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 32, 269 |
| NdeI | CATATG | 1 cut(s) | 220 |
| NdeII | GATC | 2 cut(s) | 172, 309 |
| NlaIII | CATG | 1 cut(s) | 140 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PspFI | CCCAGC | 1 cut(s) | 26 |
| PspPI | GGNCC | 1 cut(s) | 194 |
| PsuI | RGATCY | 2 cut(s) | 172, 309 |
| SaqAI | TTAA | 1 cut(s) | 240 |
| SatI | GCNGC | 1 cut(s) | 36 |
| Sau3AI | GATC | 2 cut(s) | 172, 309 |
| Sau96I | GGNCC | 1 cut(s) | 194 |
| SetI | ASST | 7 cut(s) | 21, 28, 146, 158, 199, 240, 282 |
| SinI | GGWCC | 1 cut(s) | 194 |
| SsiI | CCGC | 1 cut(s) | 35 |
| SspMI | CTAG | 1 cut(s) | 313 |
| TauI | GCSGC | 1 cut(s) | 38 |
| Tru1I | TTAA | 1 cut(s) | 240 |
| Tru9I | TTAA | 1 cut(s) | 240 |
| TspDTI | ATGAA | 1 cut(s) | 125 |
| VpaK11BI | GGWCC | 1 cut(s) | 194 |
| XspI | CTAG | 1 cut(s) | 313 |