Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0406541 |
| rosa_samantha | Rh4AG139200 Rh4BG136300 Rh4DG133600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 215 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 46, 47 |
| AgsI | TTSAA | 1 cut(s) | 276 |
| AluBI | AGCT | 1 cut(s) | 46 |
| AluI | AGCT | 1 cut(s) | 46 |
| Alw21I | GWGCWC | 1 cut(s) | 151 |
| AoxI | GGCC | 1 cut(s) | 187 |
| ApoI | RAATTY | 1 cut(s) | 215 |
| Bbv12I | GWGCWC | 1 cut(s) | 151 |
| BbvCI | CCTCAGC | 1 cut(s) | 42 |
| BccI | CCATC | 1 cut(s) | 180 |
| BfaI | CTAG | 1 cut(s) | 56 |
| Bpu10I | CCTNAGC | 1 cut(s) | 42 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 46, 47 |
| BseGI | GGATG | 2 cut(s) | 56, 172 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 46, 47 |
| BseMII | CTCAG | 1 cut(s) | 56 |
| BseYI | CCCAGC | 1 cut(s) | 46 |
| BsgI | GTGCAG | 1 cut(s) | 54 |
| BshFI | GGCC | 1 cut(s) | 189 |
| BsiHKAI | GWGCWC | 1 cut(s) | 151 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 46, 47 |
| BsnI | GGCC | 1 cut(s) | 189 |
| Bsp1286I | GDGCHC | 1 cut(s) | 151 |
| BspANI | GGCC | 1 cut(s) | 189 |
| BspCNI | CTCAG | 1 cut(s) | 55 |
| BspHI | TCATGA | 1 cut(s) | 210 |
| BstDEI | CTNAG | 1 cut(s) | 42 |
| BstF5I | GGATG | 2 cut(s) | 56, 172 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNSI | RCATGY | 1 cut(s) | 162 |
| BsuRI | GGCC | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 56, 172 |
| CciI | TCATGA | 1 cut(s) | 210 |
| CviAII | CATG | 4 cut(s) | 159, 206, 211, 300 |
| CviJI | RGCY | 3 cut(s) | 46, 189, 203 |
| CviKI_1 | RGCY | 3 cut(s) | 46, 189, 203 |
| DdeI | CTNAG | 1 cut(s) | 42 |
| DraI | TTTAAA | 1 cut(s) | 36 |
| FaeI | CATG | 4 cut(s) | 162, 209, 214, 303 |
| FaiI | YATR | 6 cut(s) | 160, 183, 207, 212, 268, 301 |
| FatI | CATG | 4 cut(s) | 158, 205, 210, 299 |
| FokI | GGATG | 2 cut(s) | 63, 159 |
| FspBI | CTAG | 1 cut(s) | 56 |
| GsaI | CCCAGC | 1 cut(s) | 50 |
| HaeIII | GGCC | 1 cut(s) | 189 |
| Hin1II | CATG | 4 cut(s) | 162, 209, 214, 303 |
| Hpy188I | TCNGA | 3 cut(s) | 22, 124, 232 |
| Hpy188III | TCNNGA | 1 cut(s) | 211 |
| HpyAV | CCTTC | 1 cut(s) | 247 |
| HpyCH4V | TGCA | 1 cut(s) | 71 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 1 cut(s) | 42 |
| Hsp92II | CATG | 4 cut(s) | 162, 209, 214, 303 |
| LmnI | GCTCC | 3 cut(s) | 111, 174, 262 |
| LpnPI | CCDG | 1 cut(s) | 32 |
| MaeI | CTAG | 1 cut(s) | 56 |
| MaeIII | GTNAC | 1 cut(s) | 221 |
| MhlI | GDGCHC | 1 cut(s) | 151 |
| MluCI | AATT | 3 cut(s) | 215, 271, 278 |
| MnlI | CCTC | 1 cut(s) | 51 |
| MseI | TTAA | 1 cut(s) | 35 |
| MslI | CAYNNNNRTG | 1 cut(s) | 265 |
| MspA1I | CMGCKG | 1 cut(s) | 46 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NlaIII | CATG | 4 cut(s) | 162, 209, 214, 303 |
| NmuCI | GTSAC | 1 cut(s) | 221 |
| NspI | RCATGY | 1 cut(s) | 162 |
| PagI | TCATGA | 1 cut(s) | 210 |
| PspFI | CCCAGC | 1 cut(s) | 46 |
| PvuII | CAGCTG | 1 cut(s) | 46 |
| RseI | CAYNNNNRTG | 1 cut(s) | 265 |
| SaqAI | TTAA | 1 cut(s) | 35 |
| SduI | GDGCHC | 1 cut(s) | 151 |
| SetI | ASST | 3 cut(s) | 19, 48, 239 |
| SgeI | CNNG | 9 cut(s) | 41, 59, 68, 166, 171, 203, 212, 218, 223 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 265 |
| Sse9I | AATT | 3 cut(s) | 215, 271, 278 |
| SspMI | CTAG | 1 cut(s) | 56 |
| TaqI | TCGA | 1 cut(s) | 243 |
| TasI | AATT | 3 cut(s) | 215, 271, 278 |
| Tru1I | TTAA | 1 cut(s) | 35 |
| Tru9I | TTAA | 1 cut(s) | 35 |
| TseFI | GTSAC | 1 cut(s) | 221 |
| Tsp45I | GTSAC | 1 cut(s) | 221 |
| TspDTI | ATGAA | 3 cut(s) | 130, 227, 229 |
| XapI | RAATTY | 1 cut(s) | 215 |
| XceI | RCATGY | 1 cut(s) | 162 |
| XspI | CTAG | 1 cut(s) | 56 |