G-quadruplex DNA unwinding
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0388401 RchiOBHm_Chr4g0413131 |
| rosa_samantha | Rh2AG296100 Rh4CG023000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 605 |
| AciI | CCGC | 1 cut(s) | 531 |
| AclWI | GGATC | 3 cut(s) | 168, 590, 603 |
| AcsI | RAATTY | 2 cut(s) | 90, 328 |
| AcuI | CTGAAG | 1 cut(s) | 495 |
| AfaI | GTAC | 1 cut(s) | 97 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 605 |
| AgsI | TTSAA | 3 cut(s) | 59, 86, 654 |
| AlwI | GGATC | 3 cut(s) | 168, 590, 603 |
| ApeKI | GCWGC | 1 cut(s) | 230 |
| ApoI | RAATTY | 2 cut(s) | 90, 328 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 81, 636 |
| AsuHPI | GGTGA | 1 cut(s) | 440 |
| BamHI | GGATCC | 1 cut(s) | 595 |
| BbvI | GCAGC | 1 cut(s) | 242 |
| BclI | TGATCA | 2 cut(s) | 133, 687 |
| BfaI | CTAG | 2 cut(s) | 345, 551 |
| BisI | GCNGC | 1 cut(s) | 231 |
| BlsI | GCNGC | 1 cut(s) | 232 |
| BmiI | GGNNCC | 1 cut(s) | 597 |
| BmsI | GCATC | 3 cut(s) | 14, 242, 299 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 605 |
| Bse1I | ACTGG | 1 cut(s) | 167 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 605 |
| BseNI | ACTGG | 1 cut(s) | 167 |
| BseXI | GCAGC | 1 cut(s) | 242 |
| BsgI | GTGCAG | 1 cut(s) | 249 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 605 |
| BsmI | GAATGC | 1 cut(s) | 274 |
| Bsp143I | GATC | 4 cut(s) | 133, 160, 595, 687 |
| BspACI | CCGC | 1 cut(s) | 531 |
| BspLI | GGNNCC | 1 cut(s) | 597 |
| BspPI | GGATC | 3 cut(s) | 168, 590, 603 |
| BsrI | ACTGG | 1 cut(s) | 167 |
| BssMI | GATC | 4 cut(s) | 133, 160, 595, 687 |
| BstKTI | GATC | 4 cut(s) | 136, 163, 598, 690 |
| BstMBI | GATC | 4 cut(s) | 133, 160, 595, 687 |
| BstV1I | GCAGC | 1 cut(s) | 242 |
| BstX2I | RGATCY | 1 cut(s) | 595 |
| BstYI | RGATCY | 1 cut(s) | 595 |
| Csp6I | GTAC | 1 cut(s) | 96 |
| CviAII | CATG | 2 cut(s) | 200, 319 |
| CviJI | RGCY | 2 cut(s) | 511, 560 |
| CviKI_1 | RGCY | 2 cut(s) | 511, 560 |
| CviQI | GTAC | 1 cut(s) | 96 |
| DpnI | GATC | 4 cut(s) | 135, 162, 597, 689 |
| DpnII | GATC | 4 cut(s) | 133, 160, 595, 687 |
| Eco57I | CTGAAG | 1 cut(s) | 495 |
| EcoT22I | ATGCAT | 1 cut(s) | 463 |
| FaeI | CATG | 2 cut(s) | 203, 322 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 468, 500 |
| FatI | CATG | 2 cut(s) | 199, 318 |
| FbaI | TGATCA | 2 cut(s) | 133, 687 |
| Fnu4HI | GCNGC | 1 cut(s) | 231 |
| Fsp4HI | GCNGC | 1 cut(s) | 231 |
| FspBI | CTAG | 2 cut(s) | 345, 551 |
| GluI | GCNGC | 1 cut(s) | 231 |
| Hin1II | CATG | 2 cut(s) | 203, 322 |
| HincII | GTYRAC | 1 cut(s) | 172 |
| HindII | GTYRAC | 1 cut(s) | 172 |
| HinfI | GANTC | 3 cut(s) | 82, 128, 479 |
| HpaI | GTTAAC | 1 cut(s) | 172 |
| HphI | GGTGA | 1 cut(s) | 440 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 475 |
| Hpy188III | TCNNGA | 5 cut(s) | 21, 65, 74, 345, 419 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 2 cut(s) | 254, 342 |
| HpyCH4V | TGCA | 8 cut(s) | 230, 257, 325, 398, 447, 461, 500, 506 |
| Hsp92II | CATG | 2 cut(s) | 203, 322 |
| Ksp22I | TGATCA | 2 cut(s) | 133, 687 |
| KspAI | GTTAAC | 1 cut(s) | 172 |
| Kzo9I | GATC | 4 cut(s) | 133, 160, 595, 687 |
| LmnI | GCTCC | 1 cut(s) | 676 |
| LpnPI | CCDG | 4 cut(s) | 180, 198, 267, 384 |
| Lsp1109I | GCAGC | 1 cut(s) | 242 |
| LweI | GCATC | 3 cut(s) | 14, 242, 299 |
| MaeI | CTAG | 2 cut(s) | 345, 551 |
| MaeIII | GTNAC | 2 cut(s) | 409, 428 |
| MalI | GATC | 4 cut(s) | 135, 162, 597, 689 |
| MboI | GATC | 4 cut(s) | 133, 160, 595, 687 |
| MboII | GAAGA | 2 cut(s) | 132, 488 |
| MfeI | CAATTG | 2 cut(s) | 337, 683 |
| MflI | RGATCY | 1 cut(s) | 595 |
| MluCI | AATT | 9 cut(s) | 90, 328, 337, 367, 448, 523, 587, 649, 683 |
| MmeI | TCCRAC | 1 cut(s) | 199 |
| MnlI | CCTC | 3 cut(s) | 17, 151, 174 |
| Mph1103I | ATGCAT | 1 cut(s) | 463 |
| MroXI | GAANNNNTTC | 2 cut(s) | 81, 636 |
| MseI | TTAA | 4 cut(s) | 41, 171, 374, 486 |
| MunI | CAATTG | 2 cut(s) | 337, 683 |
| Mva1269I | GAATGC | 1 cut(s) | 274 |
| NdeII | GATC | 4 cut(s) | 133, 160, 595, 687 |
| NlaIII | CATG | 2 cut(s) | 203, 322 |
| NlaIV | GGNNCC | 1 cut(s) | 597 |
| NmuCI | GTSAC | 1 cut(s) | 428 |
| NsiI | ATGCAT | 1 cut(s) | 463 |
| PctI | GAATGC | 1 cut(s) | 274 |
| PdmI | GAANNNNTTC | 2 cut(s) | 81, 636 |
| PfeI | GAWTC | 3 cut(s) | 82, 128, 479 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 605 |
| PkrI | GCNGC | 1 cut(s) | 232 |
| PspN4I | GGNNCC | 1 cut(s) | 597 |
| PsuI | RGATCY | 1 cut(s) | 595 |
| RsaI | GTAC | 1 cut(s) | 97 |
| RsaNI | GTAC | 1 cut(s) | 96 |
| SaqAI | TTAA | 4 cut(s) | 41, 171, 374, 486 |
| SatI | GCNGC | 1 cut(s) | 231 |
| Sau3AI | GATC | 4 cut(s) | 133, 160, 595, 687 |
| SetI | ASST | 5 cut(s) | 16, 185, 265, 316, 568 |
| SfaNI | GCATC | 3 cut(s) | 14, 242, 299 |
| Sse9I | AATT | 9 cut(s) | 90, 328, 337, 367, 448, 523, 587, 649, 683 |
| SsiI | CCGC | 1 cut(s) | 531 |
| SspI | AATATT | 5 cut(s) | 39, 241, 269, 436, 637 |
| SspMI | CTAG | 2 cut(s) | 345, 551 |
| TaqI | TCGA | 2 cut(s) | 20, 640 |
| TasI | AATT | 9 cut(s) | 90, 328, 337, 367, 448, 523, 587, 649, 683 |
| TatI | WGTACW | 1 cut(s) | 95 |
| TfiI | GAWTC | 3 cut(s) | 82, 128, 479 |
| Tru1I | TTAA | 4 cut(s) | 41, 171, 374, 486 |
| Tru9I | TTAA | 4 cut(s) | 41, 171, 374, 486 |
| TseFI | GTSAC | 1 cut(s) | 428 |
| TseI | GCWGC | 1 cut(s) | 230 |
| Tsp45I | GTSAC | 1 cut(s) | 428 |
| TspDTI | ATGAA | 5 cut(s) | 216, 233, 267, 307, 651 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 605 |
| XapI | RAATTY | 2 cut(s) | 90, 328 |
| XbaI | TCTAGA | 1 cut(s) | 344 |
| XmnI | GAANNNNTTC | 2 cut(s) | 81, 636 |
| XspI | CTAG | 2 cut(s) | 345, 551 |
| Zsp2I | ATGCAT | 1 cut(s) | 463 |