Belongs to the mitochondrial carrier (TC 2.A.29) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0487621 |
| rosa_samantha | Rh3BG319200 Rh3CG317300 Rh3DG315500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 106 |
| AcoI | YGGCCR | 1 cut(s) | 122 |
| AcuI | CTGAAG | 1 cut(s) | 209 |
| AjiI | CACGTC | 1 cut(s) | 34 |
| AluBI | AGCT | 2 cut(s) | 10, 115 |
| AluI | AGCT | 2 cut(s) | 10, 115 |
| Alw26I | GTCTC | 1 cut(s) | 24 |
| AoxI | GGCC | 1 cut(s) | 122 |
| ApeKI | GCWGC | 1 cut(s) | 47 |
| BbvI | GCAGC | 1 cut(s) | 34 |
| BcoDI | GTCTC | 1 cut(s) | 24 |
| BisI | GCNGC | 1 cut(s) | 48 |
| BlsI | GCNGC | 1 cut(s) | 49 |
| BmgBI | CACGTC | 1 cut(s) | 34 |
| BpmI | CTGGAG | 1 cut(s) | 26 |
| BseRI | GAGGAG | 1 cut(s) | 42 |
| BseXI | GCAGC | 1 cut(s) | 34 |
| BshFI | GGCC | 1 cut(s) | 124 |
| BsmAI | GTCTC | 1 cut(s) | 24 |
| BsmBI | CGTCTC | 1 cut(s) | 24 |
| BsnI | GGCC | 1 cut(s) | 124 |
| BspACI | CCGC | 1 cut(s) | 106 |
| BspANI | GGCC | 1 cut(s) | 124 |
| Bst4CI | ACNGT | 1 cut(s) | 65 |
| BstC8I | GCNNGC | 1 cut(s) | 113 |
| BstMAI | GTCTC | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 112, 121 |
| BstV1I | GCAGC | 1 cut(s) | 34 |
| BsuRI | GGCC | 1 cut(s) | 124 |
| BtrI | CACGTC | 1 cut(s) | 34 |
| BtsI | GCAGTG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 3 cut(s) | 42, 70, 185 |
| Cac8I | GCNNGC | 1 cut(s) | 113 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 174, 209 |
| CviJI | RGCY | 5 cut(s) | 10, 115, 124, 131, 184 |
| CviKI_1 | RGCY | 5 cut(s) | 10, 115, 124, 131, 184 |
| EaeI | YGGCCR | 1 cut(s) | 122 |
| Eco57I | CTGAAG | 1 cut(s) | 209 |
| Esp3I | CGTCTC | 1 cut(s) | 24 |
| FaiI | YATR | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 1 cut(s) | 48 |
| Fsp4HI | GCNGC | 1 cut(s) | 48 |
| GluI | GCNGC | 1 cut(s) | 48 |
| GsuI | CTGGAG | 1 cut(s) | 26 |
| HaeIII | GGCC | 1 cut(s) | 124 |
| HindIII | AAGCTT | 1 cut(s) | 113 |
| HinfI | GANTC | 1 cut(s) | 39 |
| Hpy188I | TCNGA | 1 cut(s) | 88 |
| Hpy188III | TCNNGA | 1 cut(s) | 219 |
| HpyCH4III | ACNGT | 1 cut(s) | 65 |
| HpyCH4IV | ACGT | 1 cut(s) | 33 |
| HpyCH4V | TGCA | 1 cut(s) | 196 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 112, 121 |
| HpySE526I | ACGT | 1 cut(s) | 33 |
| LmnI | GCTCC | 2 cut(s) | 7, 108 |
| Lsp1109I | GCAGC | 1 cut(s) | 34 |
| MaeII | ACGT | 1 cut(s) | 33 |
| MfeI | CAATTG | 1 cut(s) | 56 |
| MluCI | AATT | 2 cut(s) | 56, 77 |
| MnlI | CCTC | 2 cut(s) | 20, 63 |
| MseI | TTAA | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 112, 121 |
| NmeAIII | GCCGAG | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| PkrI | GCNGC | 1 cut(s) | 49 |
| SaqAI | TTAA | 1 cut(s) | 156 |
| SatI | GCNGC | 1 cut(s) | 48 |
| SetI | ASST | 4 cut(s) | 12, 36, 74, 117 |
| SgeI | CNNG | 7 cut(s) | 17, 46, 124, 132, 176, 187, 211 |
| Sse9I | AATT | 2 cut(s) | 56, 77 |
| SsiI | CCGC | 1 cut(s) | 106 |
| TaaI | ACNGT | 1 cut(s) | 65 |
| TaiI | ACGT | 1 cut(s) | 36 |
| TasI | AATT | 2 cut(s) | 56, 77 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| Tru1I | TTAA | 1 cut(s) | 156 |
| Tru9I | TTAA | 1 cut(s) | 156 |
| TscAI | CASTG | 3 cut(s) | 49, 70, 192 |
| TseI | GCWGC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 2 cut(s) | 194, 204 |
| TspRI | CASTG | 3 cut(s) | 49, 70, 192 |