Rh3BG319200

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
32735740 .. 32736121
382 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG319200.1

Sequence Viewer

Length: 189 bp
ATGCTGGAGCTGTCGGTTTTGGATAGAGGAGACGCGAGATTCACTGCTGCTAAACAATTGGGTGGTGAGAGGTGTAAATTGACATCAGATTGGAGATTAGGGGTTGCGGAGCAAGCTTTCTCAGCAGTTGGTGCTATGTTTCTATCTGCGATTATTGTTAATCCACTTGATGTCGCCAAGGGTTGGTGA

Protein Analysis

62

Amino Acids

6.68

Weight (kDa)

6.08

Isoelectric Point (pI)

9.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0022711)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0487621
rosa_samantha Rh3BG319200 Rh3CG317300 Rh3DG315500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 183
AccII CGCG 1 cut(s) 35
AciI CCGC 1 cut(s) 107
AfiI CCNNNNNNNGG 1 cut(s) 183
AluBI AGCT 2 cut(s) 10, 116
AluI AGCT 2 cut(s) 10, 116
Alw26I GTCTC 1 cut(s) 24
ApeKI GCWGC 1 cut(s) 47
AsuHPI GGTGA 1 cut(s) 77
BbvI GCAGC 1 cut(s) 34
BcoDI GTCTC 1 cut(s) 24
BisI GCNGC 1 cut(s) 48
BlsI GCNGC 1 cut(s) 49
BpmI CTGGAG 1 cut(s) 26
BsaJI CCNNGG 1 cut(s) 177
Bsc4I CCNNNNNNNGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 177
BseLI CCNNNNNNNGG 1 cut(s) 183
BseMII CTCAG 1 cut(s) 135
BseRI GAGGAG 1 cut(s) 42
BseXI GCAGC 1 cut(s) 34
Bsh1236I CGCG 1 cut(s) 35
BslI CCNNNNNNNGG 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 24
BsmBI CGTCTC 1 cut(s) 24
BspACI CCGC 1 cut(s) 107
BspCNI CTCAG 1 cut(s) 134
BspFNI CGCG 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 131
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 121
BstFNI CGCG 1 cut(s) 35
BstMAI GTCTC 1 cut(s) 24
BstMWI GCNNNNNNNGC 3 cut(s) 113, 122, 131
BstUI CGCG 1 cut(s) 35
BstV1I GCAGC 1 cut(s) 34
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 1 cut(s) 42
Cac8I GCNNGC 1 cut(s) 114
CseI GACGC 1 cut(s) 41
CviJI RGCY 2 cut(s) 10, 116
CviKI_1 RGCY 2 cut(s) 10, 116
DdeI CTNAG 1 cut(s) 121
Eco130I CCWWGG 1 cut(s) 177
EcoT14I CCWWGG 1 cut(s) 177
ErhI CCWWGG 1 cut(s) 177
Esp3I CGTCTC 1 cut(s) 24
FaiI YATR 1 cut(s) 137
Fnu4HI GCNGC 1 cut(s) 48
Fsp4HI GCNGC 1 cut(s) 48
GluI GCNGC 1 cut(s) 48
GsuI CTGGAG 1 cut(s) 26
HgaI GACGC 1 cut(s) 41
HindIII AAGCTT 1 cut(s) 114
HinfI GANTC 1 cut(s) 39
HphI GGTGA 1 cut(s) 77
Hpy188I TCNGA 1 cut(s) 88
HpyF10VI GCNNNNNNNGC 3 cut(s) 113, 122, 131
HpyF3I CTNAG 1 cut(s) 121
LmnI GCTCC 2 cut(s) 7, 109
Lsp1109I GCAGC 1 cut(s) 34
MfeI CAATTG 1 cut(s) 56
MluCI AATT 2 cut(s) 56, 77
MnlI CCTC 2 cut(s) 20, 63
MseI TTAA 1 cut(s) 159
MunI CAATTG 1 cut(s) 56
MvnI CGCG 1 cut(s) 35
MwoI GCNNNNNNNGC 3 cut(s) 113, 122, 131
PfeI GAWTC 1 cut(s) 39
PflMI CCANNNNNTGG 1 cut(s) 183
PkrI GCNGC 1 cut(s) 49
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 1 cut(s) 48
SetI ASST 3 cut(s) 12, 74, 118
SgeI CNNG 5 cut(s) 17, 46, 48, 125, 179
Sse9I AATT 2 cut(s) 56, 77
SsiI CCGC 1 cut(s) 107
StyI CCWWGG 1 cut(s) 177
TasI AATT 2 cut(s) 56, 77
TfiI GAWTC 1 cut(s) 39
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TscAI CASTG 1 cut(s) 49
TseI GCWGC 1 cut(s) 47
TspRI CASTG 1 cut(s) 49
Van91I CCANNNNNTGG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.