Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0312971 |
| rosa_laevigata | RLG00000000363 |
| rosa_multiflora | Rmu_sc0001942.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00119370 |
| rosa_rugosa | RorugMtG0000700.1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 6 |
| AciI | CCGC | 4 cut(s) | 6, 39, 141, 247 |
| AcoI | YGGCCR | 1 cut(s) | 221 |
| AfaI | GTAC | 2 cut(s) | 21, 64 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 34, 179 |
| AgsI | TTSAA | 1 cut(s) | 81 |
| AhlI | ACTAGT | 1 cut(s) | 230 |
| AluBI | AGCT | 2 cut(s) | 146, 254 |
| AluI | AGCT | 2 cut(s) | 146, 254 |
| AoxI | GGCC | 2 cut(s) | 53, 221 |
| AspS9I | GGNCC | 1 cut(s) | 243 |
| AsuC2I | CCSGG | 1 cut(s) | 194 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BbsI | GAAGAC | 2 cut(s) | 69, 233 |
| BceAI | ACGGC | 1 cut(s) | 38 |
| BcnI | CCSGG | 1 cut(s) | 194 |
| BcuI | ACTAGT | 1 cut(s) | 230 |
| BfaI | CTAG | 1 cut(s) | 231 |
| Bme1390I | CCNGG | 1 cut(s) | 194 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmgT120I | GGNCC | 1 cut(s) | 243 |
| BmiI | GGNNCC | 3 cut(s) | 26, 184, 245 |
| BmrFI | CCNGG | 1 cut(s) | 194 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BpiI | GAAGAC | 2 cut(s) | 69, 233 |
| BpuMI | CCSGG | 1 cut(s) | 194 |
| BsaAI | YACGTR | 1 cut(s) | 19 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 174, 204 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 34, 179 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 34, 179 |
| BseX3I | CGGCCG | 1 cut(s) | 221 |
| Bsh1285I | CGRYCG | 1 cut(s) | 224 |
| BshFI | GGCC | 2 cut(s) | 55, 223 |
| BsiEI | CGRYCG | 1 cut(s) | 224 |
| BsiSI | CCGG | 2 cut(s) | 194, 220 |
| BsiWI | CGTACG | 1 cut(s) | 19 |
| BslFI | GGGAC | 2 cut(s) | 176, 229 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 34, 179 |
| BsmFI | GGGAC | 2 cut(s) | 176, 229 |
| BsnI | GGCC | 2 cut(s) | 55, 223 |
| Bsp143I | GATC | 1 cut(s) | 126 |
| BspACI | CCGC | 4 cut(s) | 6, 39, 141, 247 |
| BspANI | GGCC | 2 cut(s) | 55, 223 |
| BspLI | GGNNCC | 3 cut(s) | 26, 184, 245 |
| BsrBI | CCGCTC | 1 cut(s) | 6 |
| BssMI | GATC | 1 cut(s) | 126 |
| Bst6I | CTCTTC | 1 cut(s) | 181 |
| BstBAI | YACGTR | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 1 cut(s) | 187 |
| BstKTI | GATC | 1 cut(s) | 129 |
| BstMBI | GATC | 1 cut(s) | 126 |
| BstMCI | CGRYCG | 1 cut(s) | 224 |
| BstSCI | CCNGG | 1 cut(s) | 192 |
| BstV2I | GAAGAC | 2 cut(s) | 69, 233 |
| BstZI | CGGCCG | 1 cut(s) | 221 |
| BsuRI | GGCC | 2 cut(s) | 55, 223 |
| Cac8I | GCNNGC | 1 cut(s) | 187 |
| Cfr13I | GGNCC | 1 cut(s) | 243 |
| CseI | GACGC | 1 cut(s) | 178 |
| Csp6I | GTAC | 2 cut(s) | 20, 63 |
| CviJI | RGCY | 7 cut(s) | 25, 55, 146, 169, 185, 223, 254 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 55, 146, 169, 185, 223, 254 |
| CviQI | GTAC | 2 cut(s) | 20, 63 |
| DpnI | GATC | 1 cut(s) | 128 |
| DpnII | GATC | 1 cut(s) | 126 |
| EaeI | YGGCCR | 1 cut(s) | 221 |
| EagI | CGGCCG | 1 cut(s) | 221 |
| Eam1104I | CTCTTC | 1 cut(s) | 181 |
| EarI | CTCTTC | 1 cut(s) | 181 |
| EclXI | CGGCCG | 1 cut(s) | 221 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| Eco52I | CGGCCG | 1 cut(s) | 221 |
| FaiI | YATR | 2 cut(s) | 117, 125 |
| FaqI | GGGAC | 2 cut(s) | 176, 229 |
| FauI | CCCGC | 1 cut(s) | 254 |
| FspBI | CTAG | 1 cut(s) | 231 |
| HaeIII | GGCC | 2 cut(s) | 55, 223 |
| HapII | CCGG | 2 cut(s) | 194, 220 |
| HgaI | GACGC | 1 cut(s) | 178 |
| HpaII | CCGG | 2 cut(s) | 194, 220 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 44 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 180 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 44 |
| HpyAV | CCTTC | 2 cut(s) | 28, 257 |
| HpyCH4IV | ACGT | 2 cut(s) | 12, 18 |
| HpyCH4V | TGCA | 2 cut(s) | 151, 207 |
| HpySE526I | ACGT | 2 cut(s) | 12, 18 |
| Kzo9I | GATC | 1 cut(s) | 126 |
| LmnI | GCTCC | 3 cut(s) | 30, 143, 182 |
| LpnPI | CCDG | 3 cut(s) | 199, 207, 233 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeI | CTAG | 1 cut(s) | 231 |
| MaeII | ACGT | 2 cut(s) | 12, 18 |
| MaeIII | GTNAC | 1 cut(s) | 8 |
| MalI | GATC | 1 cut(s) | 128 |
| MbiI | CCGCTC | 1 cut(s) | 6 |
| MboI | GATC | 1 cut(s) | 126 |
| MboII | GAAGA | 3 cut(s) | 69, 168, 238 |
| MnlI | CCTC | 4 cut(s) | 76, 129, 184, 227 |
| MseI | TTAA | 1 cut(s) | 131 |
| MspI | CCGG | 2 cut(s) | 194, 220 |
| MspR9I | CCNGG | 1 cut(s) | 194 |
| NciI | CCSGG | 1 cut(s) | 194 |
| NdeII | GATC | 1 cut(s) | 126 |
| NlaIV | GGNNCC | 3 cut(s) | 26, 184, 245 |
| Pfl23II | CGTACG | 1 cut(s) | 19 |
| Ppu21I | YACGTR | 1 cut(s) | 19 |
| PspLI | CGTACG | 1 cut(s) | 19 |
| PspN4I | GGNNCC | 3 cut(s) | 26, 184, 245 |
| PspPI | GGNCC | 1 cut(s) | 243 |
| RsaI | GTAC | 2 cut(s) | 21, 64 |
| RsaNI | GTAC | 2 cut(s) | 20, 63 |
| SaqAI | TTAA | 1 cut(s) | 131 |
| Sau3AI | GATC | 1 cut(s) | 126 |
| Sau96I | GGNCC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 1 cut(s) | 194 |
| SetI | ASST | 7 cut(s) | 15, 21, 68, 140, 148, 242, 256 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SpeI | ACTAGT | 1 cut(s) | 230 |
| SsiI | CCGC | 4 cut(s) | 6, 39, 141, 247 |
| SspMI | CTAG | 1 cut(s) | 231 |
| StyD4I | CCNGG | 1 cut(s) | 192 |
| TaiI | ACGT | 2 cut(s) | 15, 21 |
| Tru1I | TTAA | 1 cut(s) | 131 |
| Tru9I | TTAA | 1 cut(s) | 131 |
| TspGWI | ACGGA | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| XspI | CTAG | 1 cut(s) | 231 |