RLG00000000363

NADH dehydrogenase (quinone) activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0020868
Physical Location & Seq
Forward (+)
715223 .. 717190
1968 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000363

Sequence Viewer

Length: 1968 bp
ATGAAAGAGGCGATCAGAATGGTACTCGAATTCATTTACGATCCCGAGTTTCCAGACACATCGCACTTCCGCTCGGGTCGAGGCCGCCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCGCTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATTCCAATCTTTAAAGAAGAGATCGACGATCCCAAGTTCTTTTACCCCATTCAGAAAGTCTTTTCCGCCGGACGCCTCGTAGGAGGTGAGAAGGGCCCTTATTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGGTTGTTCAGAGAATCGGATCGGTTCTATTAAGGACAGGTCGTATTGATGACCAAGAAAACTCTGGAGAAGAAGCAAGCTTCAACGTTCCCCAAGACAACAGAGCCATCATTGTGGGGAGGGTAAAGAGCATCCAACGCAAAGCGGCCTTAAATTCCCTTGTTTCGTCGTGGCACACCCCCCCCACAAGCACCCCCCGGCTCAGGGGGGACCAGAAAACGCCTTTCTTTTTCCCCCCTTCGTCGGCCCTTGCCGCCTTCCTTAACAAGCCCTCGAGCCTCCTTTGCGCCGCCTTCCTCATAGAAGCTGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTAGAGAACGCTGTAATAATAATTGGGCCATGAGAGACCTTATTAAGTATTGCAAAAGAAAGGGCCTGCTGATAGAGCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGACGCCTGGCCCGTAAGCTGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTCACTACTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTCTGCAGGATCAACAACAATAGCTGCACGGAGTACGGTAGAATTTCCCGGTACGGTCATTCGGGAAGTCCCTCCGAGGACGACCCCCATACAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCACCTACGCTCCACCATCCATTCCAAGTTTAGGAACCTAGGTAATAGTATCCCGATCAAACAGCTGACGAAGGGGATGAGCGAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGACACTCTTGGAACAGCTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAGAATCAAAGGGGATCCCGTTGTTGCATAGCTCAGGTCGGAGCAAGGCGCCATCGGACGTTCAACAGGCAGTCTCACGATCGGGCATGGGTGTCCGGAAGTTGTCATTGTACACTCCCCCGGGTCGAAAGGCGGCGGAGGAAGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCTATACAGATAGAGGCGCCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGCTTGACGAACGTCAGCGACGGAGACATCGTAAATTGGTCCGCGGGCATCGCGATAAGTCCTCTGTCCTACTACAGGTGCCGCGACAACCTTTACCAAGTCCGAACGATTGTCGACCACCAGATCCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCCAAAGTACTCCAAAGACTCAAATATAGTAAATCAAGAAGGTGGTAAGACCCTTGCAGAGTTCCCCAACAGCATAGAGCTGGGGAAGCTCGGACCCGGTCAAGATCCGAACAACAAGGAGCACTCAACTACTAGTCTAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Intron_maturas2

Protein Analysis

656

Amino Acids

73.53

Weight (kDa)

10.06

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Intron_maturas2 PF01348 517 - 612 4.1e-11 Type II intron maturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0020868)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0312971
rosa_laevigata RLG00000000363
rosa_multiflora Rmu_sc0001942.1_g000018
rosa_roxburghii Rroxscaffold_2G00119370
rosa_rugosa RorugMtG0000700.1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 941, 1408, 1558, 1716
AccBSI CCGCTC 1 cut(s) 72
AccI GTMKAC 3 cut(s) 1135, 1264, 1752
AccII CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
AccIII TCCGGA 1 cut(s) 1455
AclI AACGTT 1 cut(s) 477
AcoI YGGCCR 1 cut(s) 1622
AcsI RAATTY 7 cut(s) 29, 143, 387, 544, 722, 1058, 1538
AcvI CACGTG 1 cut(s) 1633
AcyI GRCGYC 4 cut(s) 262, 847, 1409, 1559
AdeI CACNNNGTG 1 cut(s) 305
AfaI GTAC 7 cut(s) 24, 309, 383, 1051, 1069, 1472, 1832
AgsI TTSAA 3 cut(s) 475, 1280, 1424
AhlI ACTAGT 2 cut(s) 826, 1955
AjnI CCWGG 3 cut(s) 325, 849, 1619
Alw21I GWGCWC 1 cut(s) 1947
Alw26I GTCTC 4 cut(s) 759, 838, 1438, 1656
Ama87I CYCGRG 4 cut(s) 44, 73, 664, 1480
Aor13HI TCCGGA 1 cut(s) 1455
ApaI GGGCCC 1 cut(s) 287
ApeKI GCWGC 3 cut(s) 698, 1040, 1533
ApoI RAATTY 7 cut(s) 29, 143, 387, 544, 722, 1058, 1538
AspA2I CCTAGG 1 cut(s) 1207
AspLEI GCGC 5 cut(s) 680, 907, 1411, 1561, 1813
AsuC2I CCSGG 6 cut(s) 589, 703, 1065, 1481, 1482, 1920
AsuHPI GGTGA 2 cut(s) 287, 1774
AvaI CYCGRG 4 cut(s) 44, 73, 664, 1480
AvaII GGWCC 4 cut(s) 601, 1341, 1677, 1916
AvrII CCTAGG 1 cut(s) 1207
BaeGI GKGCMC 1 cut(s) 287
BalI TGGCCA 1 cut(s) 1624
BamHI GGATCC 2 cut(s) 369, 1374
BanI GGYRCC 4 cut(s) 941, 1408, 1558, 1716
BanII GRGCYC 1 cut(s) 287
BbrPI CACGTG 1 cut(s) 1633
BbsI GAAGAC 1 cut(s) 1621
Bbv12I GWGCWC 1 cut(s) 1947
BbvI GCAGC 3 cut(s) 685, 1027, 1545
BccI CCATC 4 cut(s) 179, 506, 1193, 1420
BceAI ACGGC 1 cut(s) 929
BciT130I CCWGG 3 cut(s) 327, 851, 1621
BciVI GTATCC 2 cut(s) 1163, 1229
BcnI CCSGG 6 cut(s) 589, 703, 1065, 1481, 1482, 1920
BcoDI GTCTC 4 cut(s) 759, 838, 1438, 1656
BcuI ACTAGT 2 cut(s) 826, 1955
BfaI CTAG 7 cut(s) 827, 1208, 1283, 1787, 1956, 1961, 1966
BfmI CTRYAG 2 cut(s) 1020, 1711
BfoI RGCGCY 2 cut(s) 1412, 1562
BfuI GTATCC 2 cut(s) 1163, 1229
BisI GCNGC 9 cut(s) 85, 537, 645, 681, 699, 1041, 1494, 1534, 1720
BlnI CCTAGG 1 cut(s) 1207
BlsI GCNGC 9 cut(s) 86, 538, 646, 682, 700, 1042, 1495, 1535, 1721
BmcAI AGTACT 1 cut(s) 1832
Bme1390I CCNGG 9 cut(s) 327, 589, 703, 851, 1065, 1481, 1482, 1621, 1920
Bme18I GGWCC 4 cut(s) 601, 1341, 1677, 1916
BmeT110I CYCGRG 4 cut(s) 44, 73, 664, 1480
BmrFI CCNGG 9 cut(s) 327, 589, 703, 851, 1065, 1481, 1482, 1621, 1920
BmrI ACTGGG 2 cut(s) 938, 1525
BmsI GCATC 2 cut(s) 531, 1695
BmuI ACTGGG 2 cut(s) 938, 1525
BoxI GACNNNNGTC 1 cut(s) 1649
BpiI GAAGAC 1 cut(s) 1621
BpmI CTGGAG 3 cut(s) 477, 1145, 1326
Bpu10I CCTNAGC 2 cut(s) 593, 1393
BpuMI CCSGG 6 cut(s) 589, 703, 1065, 1481, 1482, 1920
BsaAI YACGTR 1 cut(s) 1633
BsaHI GRCGYC 4 cut(s) 262, 847, 1409, 1559
BsaI GGTCTC 1 cut(s) 759
BsaJI CCNNGG 8 cut(s) 587, 1091, 1207, 1479, 1480, 1619, 1680, 1806
BsaWI WCCGGW 2 cut(s) 391, 1455
BsaXI ACNNNNNCTCC 4 cut(s) 1163, 1193, 1653, 1683
Bse1I ACTGG 3 cut(s) 933, 1272, 1520
BseAI TCCGGA 1 cut(s) 1455
BseBI CCWGG 3 cut(s) 327, 851, 1621
BseDI CCNNGG 8 cut(s) 587, 1091, 1207, 1479, 1480, 1619, 1680, 1806
BseGI GGATG 4 cut(s) 522, 1185, 1251, 1353
BseMII CTCAG 2 cut(s) 607, 1407
BseNI ACTGG 3 cut(s) 933, 1272, 1520
BseRI GAGGAG 1 cut(s) 1521
BseSI GKGCMC 1 cut(s) 287
BseXI GCAGC 3 cut(s) 685, 1027, 1545
BseYI CCCAGC 2 cut(s) 808, 1903
BsgI GTGCAG 1 cut(s) 1026
Bsh1236I CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
Bsh1285I CGRYCG 2 cut(s) 178, 1442
BshNI GGYRCC 4 cut(s) 941, 1408, 1558, 1716
BsiEI CGRYCG 2 cut(s) 178, 1442
BsiHKAI GWGCWC 1 cut(s) 1947
BsiHKCI CYCGRG 4 cut(s) 44, 73, 664, 1480
BslFI GGGAC 5 cut(s) 281, 614, 1070, 1302, 1354
BsmAI GTCTC 4 cut(s) 759, 838, 1438, 1656
BsmBI CGTCTC 1 cut(s) 838
BsmFI GGGAC 5 cut(s) 281, 614, 1070, 1302, 1354
Bso31I GGTCTC 1 cut(s) 759
BsoBI CYCGRG 4 cut(s) 44, 73, 664, 1480
Bsp120I GGGCCC 1 cut(s) 283
Bsp1286I GDGCHC 2 cut(s) 287, 1947
Bsp13I TCCGGA 1 cut(s) 1455
Bsp1407I TGTACA 1 cut(s) 1470
Bsp68I TCGCGA 1 cut(s) 1691
BspCNI CTCAG 2 cut(s) 606, 1406
BspEI TCCGGA 1 cut(s) 1455
BspFNI CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
BspMAI CTGCAG 1 cut(s) 1024
BspT107I GGYRCC 4 cut(s) 941, 1408, 1558, 1716
BspTNI GGTCTC 1 cut(s) 759
BsrBI CCGCTC 1 cut(s) 72
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 3 cut(s) 933, 1272, 1520
BssECI CCNNGG 8 cut(s) 587, 1091, 1207, 1479, 1480, 1619, 1680, 1806
BssNI GRCGYC 4 cut(s) 262, 847, 1409, 1559
BssT1I CCWWGG 1 cut(s) 1207
Bst2UI CCWGG 3 cut(s) 327, 851, 1621
Bst4CI ACNGT 5 cut(s) 305, 1054, 1072, 1151, 1345
Bst6I CTCTTC 2 cut(s) 108, 201
BstACI GRCGYC 4 cut(s) 262, 847, 1409, 1559
BstAUI TGTACA 1 cut(s) 1470
BstBAI YACGTR 1 cut(s) 1633
BstC8I GCNNGC 6 cut(s) 469, 797, 864, 1168, 1639, 1684
BstDEI CTNAG 3 cut(s) 98, 593, 1393
BstDSI CCRYGG 1 cut(s) 1680
BstENI CCTNNNNNAGG 1 cut(s) 1711
BstF5I GGATG 4 cut(s) 522, 1185, 1251, 1353
BstFNI CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
BstH2I RGCGCY 2 cut(s) 1412, 1562
BstHHI GCGC 5 cut(s) 680, 907, 1411, 1561, 1813
BstMAI GTCTC 4 cut(s) 759, 838, 1438, 1656
BstMCI CGRYCG 2 cut(s) 178, 1442
BstNI CCWGG 3 cut(s) 327, 851, 1621
BstPAI GACNNNNGTC 1 cut(s) 1649
BstSCI CCNGG 9 cut(s) 325, 587, 701, 849, 1063, 1479, 1480, 1619, 1918
BstSFI CTRYAG 2 cut(s) 1020, 1711
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
BstV1I GCAGC 3 cut(s) 685, 1027, 1545
BstV2I GAAGAC 1 cut(s) 1621
BstX2I RGATCY 5 cut(s) 369, 1374, 1523, 1761, 1927
BstXI CCANNNNNNTGG 1 cut(s) 505
BstYI RGATCY 5 cut(s) 369, 1374, 1523, 1761, 1927
BsuI GTATCC 2 cut(s) 1163, 1229
BtgI CCRYGG 1 cut(s) 1680
BtgZI GCGATG 2 cut(s) 45, 1672
BtsCI GGATG 4 cut(s) 522, 1185, 1251, 1353
BtsIMutI CAGTG 2 cut(s) 310, 1513
BtuMI TCGCGA 1 cut(s) 1691
Cac8I GCNNGC 6 cut(s) 469, 797, 864, 1168, 1639, 1684
CfoI GCGC 5 cut(s) 680, 907, 1411, 1561, 1813
Cfr42I CCGCGG 1 cut(s) 1683
Cfr9I CCCGGG 1 cut(s) 1480
CseI GACGC 3 cut(s) 270, 855, 1121
Csp6I GTAC 7 cut(s) 23, 308, 382, 1050, 1068, 1471, 1831
CspCI CAANNNNNGTGG 2 cut(s) 1614, 1649
CviAII CATG 2 cut(s) 760, 1447
CviQI GTAC 7 cut(s) 23, 308, 382, 1050, 1068, 1471, 1831
DdeI CTNAG 3 cut(s) 98, 593, 1393
DinI GGCGCC 2 cut(s) 1410, 1560
DraI TTTAAA 1 cut(s) 202
DraIII CACNNNGTG 1 cut(s) 305
EaeI YGGCCR 1 cut(s) 1622
Eam1104I CTCTTC 2 cut(s) 108, 201
EarI CTCTTC 2 cut(s) 108, 201
EciI GGCGGA 2 cut(s) 244, 1511
Eco130I CCWWGG 1 cut(s) 1207
Eco24I GRGCYC 1 cut(s) 287
Eco31I GGTCTC 1 cut(s) 759
Eco47I GGWCC 4 cut(s) 601, 1341, 1677, 1916
Eco72I CACGTG 1 cut(s) 1633
Eco88I CYCGRG 4 cut(s) 44, 73, 664, 1480
EcoNI CCTNNNNNAGG 1 cut(s) 1711
EcoO109I RGGNCCY 3 cut(s) 283, 284, 793
EcoRI GAATTC 4 cut(s) 29, 143, 722, 1538
EcoRII CCWGG 3 cut(s) 325, 849, 1619
EcoT14I CCWWGG 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 287
EgeI GGCGCC 2 cut(s) 1410, 1560
EheI GGCGCC 2 cut(s) 1410, 1560
ErhI CCWWGG 1 cut(s) 1207
Esp3I CGTCTC 1 cut(s) 838
FaeI CATG 2 cut(s) 763, 1450
FaqI GGGAC 5 cut(s) 281, 614, 1070, 1302, 1354
FatI CATG 2 cut(s) 759, 1446
FauI CCCGC 3 cut(s) 806, 1513, 1675
FblI GTMKAC 3 cut(s) 1135, 1264, 1752
Fnu4HI GCNGC 9 cut(s) 85, 537, 645, 681, 699, 1041, 1494, 1534, 1720
FokI GGATG 4 cut(s) 509, 1172, 1258, 1340
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 9 cut(s) 85, 537, 645, 681, 699, 1041, 1494, 1534, 1720
FspBI CTAG 7 cut(s) 827, 1208, 1283, 1787, 1956, 1961, 1966
GlaI GCGC 5 cut(s) 679, 906, 1410, 1560, 1812
GluI GCNGC 9 cut(s) 85, 537, 645, 681, 699, 1041, 1494, 1534, 1720
GsaI CCCAGC 2 cut(s) 812, 1907
GsuI CTGGAG 3 cut(s) 477, 1145, 1326
HaeII RGCGCY 2 cut(s) 1412, 1562
HgaI GACGC 3 cut(s) 270, 855, 1121
HhaI GCGC 5 cut(s) 680, 907, 1411, 1561, 1813
Hin1I GRCGYC 4 cut(s) 262, 847, 1409, 1559
Hin1II CATG 2 cut(s) 763, 1450
Hin6I GCGC 5 cut(s) 678, 905, 1409, 1559, 1811
HinP1I GCGC 5 cut(s) 678, 905, 1409, 1559, 1811
HincII GTYRAC 2 cut(s) 708, 1753
HindII GTYRAC 2 cut(s) 708, 1753
HindIII AAGCTT 1 cut(s) 469
HinfI GANTC 7 cut(s) 186, 405, 920, 933, 1261, 1364, 1841
HphI GGTGA 2 cut(s) 287, 1774
Hpy166II GTNNAC 6 cut(s) 308, 708, 1136, 1265, 1473, 1753
Hpy8I GTNNAC 6 cut(s) 308, 708, 1136, 1265, 1473, 1753
Hpy99I CGWCG 5 cut(s) 218, 562, 637, 920, 1661
HpyAV CCTTC 9 cut(s) 274, 639, 658, 694, 709, 1234, 1496, 1575, 1856
HpyCH4III ACNGT 5 cut(s) 305, 1054, 1072, 1151, 1345
HpyCH4IV ACGT 5 cut(s) 477, 973, 1419, 1632, 1650
HpyCH4V TGCA 6 cut(s) 783, 1022, 1043, 1387, 1775, 1880
HpyF3I CTNAG 3 cut(s) 98, 593, 1393
HpySE526I ACGT 5 cut(s) 477, 973, 1419, 1632, 1650
Hsp92I GRCGYC 4 cut(s) 262, 847, 1409, 1559
Hsp92II CATG 2 cut(s) 763, 1450
HspAI GCGC 5 cut(s) 678, 905, 1409, 1559, 1811
KasI GGCGCC 2 cut(s) 1408, 1558
Kpn2I TCCGGA 1 cut(s) 1455
KspI CCGCGG 1 cut(s) 1683
LmnI GCTCC 3 cut(s) 1184, 1401, 1942
Lsp1109I GCAGC 3 cut(s) 685, 1027, 1545
LweI GCATC 2 cut(s) 531, 1695
MaeI CTAG 7 cut(s) 827, 1208, 1283, 1787, 1956, 1961, 1966
MaeII ACGT 5 cut(s) 477, 973, 1419, 1632, 1650
MaeIII GTNAC 1 cut(s) 899
MbiI CCGCTC 1 cut(s) 72
MboII GAAGA 5 cut(s) 125, 218, 473, 1623, 1626
MflI RGATCY 5 cut(s) 369, 1374, 1523, 1761, 1927
MhlI GDGCHC 2 cut(s) 287, 1947
MlsI TGGCCA 1 cut(s) 1624
MluNI TGGCCA 1 cut(s) 1624
Mly113I GGCGCC 2 cut(s) 1409, 1559
MlyI GAGTC 4 cut(s) 180, 914, 1270, 1835
MmeI TCCRAC 3 cut(s) 397, 550, 1379
Mox20I TGGCCA 1 cut(s) 1624
MroI TCCGGA 1 cut(s) 1455
MscI TGGCCA 1 cut(s) 1624
MseI TTAA 7 cut(s) 201, 422, 542, 654, 774, 872, 887
MslI CAYNNNNRTG 1 cut(s) 503
Msp20I TGGCCA 1 cut(s) 1624
MspA1I CMGCKG 4 cut(s) 1234, 1304, 1682, 1767
MspR9I CCNGG 9 cut(s) 327, 589, 703, 851, 1065, 1481, 1482, 1621, 1920
MvaI CCWGG 3 cut(s) 327, 851, 1621
MvnI CGCG 6 cut(s) 905, 907, 1682, 1691, 1722, 1813
NarI GGCGCC 2 cut(s) 1409, 1559
NciI CCSGG 6 cut(s) 589, 703, 1065, 1481, 1482, 1920
NlaIII CATG 2 cut(s) 763, 1450
NmeAIII GCCGAG 2 cut(s) 71, 1787
NruI TCGCGA 1 cut(s) 1691
PaeR7I CTCGAG 1 cut(s) 664
PcsI WCGNNNNNNNCGW 3 cut(s) 853, 942, 1665
PfeI GAWTC 3 cut(s) 405, 933, 1364
PflFI GACNNNGTC 1 cut(s) 1920
PkrI GCNGC 9 cut(s) 86, 538, 646, 682, 700, 1042, 1495, 1535, 1721
Ple19I CGATCG 1 cut(s) 1442
PleI GAGTC 4 cut(s) 180, 914, 1269, 1835
PluTI GGCGCC 2 cut(s) 1412, 1562
PmaCI CACGTG 1 cut(s) 1633
PmlI CACGTG 1 cut(s) 1633
PpsI GAGTC 4 cut(s) 180, 914, 1269, 1835
Ppu21I YACGTR 1 cut(s) 1633
PshAI GACNNNNGTC 1 cut(s) 1649
Psp1406I AACGTT 1 cut(s) 477
Psp6I CCWGG 3 cut(s) 325, 849, 1619
PspCI CACGTG 1 cut(s) 1633
PspFI CCCAGC 2 cut(s) 808, 1903
PspGI CCWGG 3 cut(s) 325, 849, 1619
PspOMI GGGCCC 1 cut(s) 283
PspXI VCTCGAGB 1 cut(s) 664
PstI CTGCAG 1 cut(s) 1024
PsuI RGATCY 5 cut(s) 369, 1374, 1523, 1761, 1927
PsyI GACNNNGTC 1 cut(s) 1920
PvuI CGATCG 1 cut(s) 1442
PvuII CAGCTG 2 cut(s) 1234, 1304
RruI TCGCGA 1 cut(s) 1691
RsaI GTAC 7 cut(s) 24, 309, 383, 1051, 1069, 1472, 1832
RsaNI GTAC 7 cut(s) 23, 308, 382, 1050, 1068, 1471, 1831
RseI CAYNNNNRTG 1 cut(s) 503
SacII CCGCGG 1 cut(s) 1683
SalI GTCGAC 1 cut(s) 1751
SaqAI TTAA 7 cut(s) 201, 422, 542, 654, 774, 872, 887
SatI GCNGC 9 cut(s) 85, 537, 645, 681, 699, 1041, 1494, 1534, 1720
ScaI AGTACT 1 cut(s) 1832
SchI GAGTC 4 cut(s) 180, 914, 1270, 1835
ScrFI CCNGG 9 cut(s) 327, 589, 703, 851, 1065, 1481, 1482, 1621, 1920
SduI GDGCHC 2 cut(s) 287, 1947
SfaNI GCATC 2 cut(s) 531, 1695
SfcI CTRYAG 2 cut(s) 1020, 1711
SfoI GGCGCC 2 cut(s) 1410, 1560
Sfr274I CTCGAG 1 cut(s) 664
Sfr303I CCGCGG 1 cut(s) 1683
SgrBI CCGCGG 1 cut(s) 1683
SinI GGWCC 4 cut(s) 601, 1341, 1677, 1916
SlaI CTCGAG 1 cut(s) 664
SmaI CCCGGG 1 cut(s) 1482
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 1 cut(s) 664
SmoI CTYRAG 1 cut(s) 664
SpeI ACTAGT 2 cut(s) 826, 1955
SspDI GGCGCC 2 cut(s) 1408, 1558
SspI AATATT 1 cut(s) 1779
SspMI CTAG 7 cut(s) 827, 1208, 1283, 1787, 1956, 1961, 1966
StyD4I CCNGG 9 cut(s) 325, 587, 701, 849, 1063, 1479, 1480, 1619, 1918
StyI CCWWGG 1 cut(s) 1207
TaaI ACNGT 5 cut(s) 305, 1054, 1072, 1151, 1345
TaiI ACGT 5 cut(s) 480, 976, 1422, 1635, 1653
TaqII GACCGA 1 cut(s) 192
TatI WGTACW 3 cut(s) 307, 1470, 1830
TauI GCSGC 6 cut(s) 87, 539, 647, 683, 1496, 1722
TfiI GAWTC 3 cut(s) 405, 933, 1364
Tru1I TTAA 7 cut(s) 201, 422, 542, 654, 774, 872, 887
Tru9I TTAA 7 cut(s) 201, 422, 542, 654, 774, 872, 887
TscAI CASTG 2 cut(s) 310, 1520
TseI GCWGC 3 cut(s) 698, 1040, 1533
TspDTI ATGAA 2 cut(s) 17, 22
TspGWI ACGGA 4 cut(s) 118, 283, 1060, 1674
TspMI CCCGGG 1 cut(s) 1480
TspRI CASTG 2 cut(s) 310, 1520
Tth111I GACNNNGTC 1 cut(s) 1920
VpaK11BI GGWCC 4 cut(s) 601, 1341, 1677, 1916
XagI CCTNNNNNAGG 1 cut(s) 1711
XapI RAATTY 7 cut(s) 29, 143, 387, 544, 722, 1058, 1538
XcmI CCANNNNNNNNNTGG 1 cut(s) 452
XhoI CTCGAG 1 cut(s) 664
XmaI CCCGGG 1 cut(s) 1480
XmaJI CCTAGG 1 cut(s) 1207
XmiI GTMKAC 3 cut(s) 1135, 1264, 1752
XspI CTAG 7 cut(s) 827, 1208, 1283, 1787, 1956, 1961, 1966
ZrmI AGTACT 1 cut(s) 1832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.